BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004928
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330417.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              129   3e-28
ref|XP_002329064.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17
emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]    87   2e-15
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]    86   3e-15

>ref|XP_002330417.1| predicted protein [Populus trichocarpa] gi|222871802|gb|EEF08933.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score =  166 bits (419), Expect = 2e-39
 Identities = 81/103 (78%), Positives = 93/103 (90%)
 Frame = -1

Query: 340 DQMILSWINSFLTPSVLSTVARYTSSRDTWLSLEKRYASHSQNRILQLRNDLFTTKGEGL 161
           DQMILSWIN+ L+P+VLSTVAR+TSS+ TW SLEKRYAS S+NRILQLR+DL T KGEGL
Sbjct: 81  DQMILSWINNSLSPTVLSTVARFTSSQATWSSLEKRYASQSKNRILQLRHDLLTVKGEGL 140

Query: 160 SISDFVDKINQLADNLALAGKPIEDDDLVTIIMNNVGSTYEAT 32
           SISDFVDKINQ+ADNLALAGKP++DD+LV II+NNVG  YE T
Sbjct: 141 SISDFVDKINQIADNLALAGKPVDDDELVNIILNNVGPAYEVT 183


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  129 bits (323), Expect = 3e-28
 Identities = 64/103 (62%), Positives = 76/103 (73%)
 Frame = -1

Query: 340 DQMILSWINSFLTPSVLSTVARYTSSRDTWLSLEKRYASHSQNRILQLRNDLFTTKGEGL 161
           DQM+LSWIN  LTP VLSTVAR TS   TW +L  R+AS SQ+R+LQLR DL  T    +
Sbjct: 79  DQMVLSWINGSLTPKVLSTVARSTSLHATWTALATRFASQSQHRVLQLRADLLRTTRGTM 138

Query: 160 SISDFVDKINQLADNLALAGKPIEDDDLVTIIMNNVGSTYEAT 32
           SISD++DK+N +ADNLALAG P+ D DLV I+M NVG  YE T
Sbjct: 139 SISDYLDKLNSIADNLALAGSPVPDADLVNIVMTNVGPLYETT 181


>ref|XP_002329064.1| predicted protein [Populus trichocarpa] gi|222839735|gb|EEE78058.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 44/111 (39%), Positives = 74/111 (66%), Gaps = 2/111 (1%)
 Frame = -1

Query: 340 DQMILSWINSFLTPSVLSTVARYTSSRDTWLSLEKRYASHSQNRILQLRNDLFTTKGEGL 161
           D +IL+ INS LT  VL+ V  YT+SR+ WL+LE  ++S S+ +++Q+R  L   K   +
Sbjct: 90  DSLILATINSSLTEDVLTQVMSYTTSREVWLALENNFSSLSRAKVIQIRTQLANAKKGAM 149

Query: 160 SISDFVDKINQLADNLALAGKPIEDDDLVTIIMNNVGSTYE--ATTICDKR 14
           + ++F   + ++AD LALAG+P+ +DD++T I+  +G  Y+  A+TI  +R
Sbjct: 150 TANEFFLSVKRMADELALAGQPLPNDDIITYILAGLGQEYDSLASTISSRR 200


>emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]
          Length = 2220

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 41/102 (40%), Positives = 67/102 (65%)
 Frame = -1

Query: 340  DQMILSWINSFLTPSVLSTVARYTSSRDTWLSLEKRYASHSQNRILQLRNDLFTTKGEGL 161
            D+ ILSW+ S LTP++++ +  + SS   W +LEK ++S S+ RI+QLR +L +TK   L
Sbjct: 934  DRTILSWLYSSLTPAIMAQIIGHNSSHSAWNALEKTFSSSSRARIMQLRLELQSTKKGSL 993

Query: 160  SISDFVDKINQLADNLALAGKPIEDDDLVTIIMNNVGSTYEA 35
            S+ D++ K+   AD+LA  G+P+ + D V  ++  +GS Y A
Sbjct: 994  SMIDYIMKVKGAADSLAAIGEPVSEQDQVMNLLGGLGSDYNA 1035


>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
          Length = 1271

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 38/102 (37%), Positives = 66/102 (64%)
 Frame = -1

Query: 340 DQMILSWINSFLTPSVLSTVARYTSSRDTWLSLEKRYASHSQNRILQLRNDLFTTKGEGL 161
           D+MILSWI S LTP ++  +  Y SS   W +LE+ +++ S+ R++QLR +  TT+   L
Sbjct: 195 DRMILSWIYSSLTPEIMGQIVGYQSSHAAWFALERIFSASSRARVMQLRLEFQTTRKGSL 254

Query: 160 SISDFVDKINQLADNLALAGKPIEDDDLVTIIMNNVGSTYEA 35
           ++ +++ K+  LADNLA  G+P+ D D +  ++  +G+ Y +
Sbjct: 255 TMMEYILKLKSLADNLAAIGEPVTDRDQILQLLGGLGADYNS 296