BLASTX nr result

ID: Coptis25_contig00004924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004924
         (1013 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280431.1| PREDICTED: uncharacterized protein LOC100267...   246   5e-63
ref|XP_002530364.1| conserved hypothetical protein [Ricinus comm...   237   3e-60
emb|CBI29994.3| unnamed protein product [Vitis vinifera]              233   4e-59
ref|XP_002308356.1| predicted protein [Populus trichocarpa] gi|2...   233   4e-59
ref|XP_004136559.1| PREDICTED: uncharacterized protein LOC101219...   229   1e-57

>ref|XP_002280431.1| PREDICTED: uncharacterized protein LOC100267633 [Vitis vinifera]
          Length = 271

 Score =  246 bits (629), Expect = 5e-63
 Identities = 124/220 (56%), Positives = 160/220 (72%), Gaps = 4/220 (1%)
 Frame = -2

Query: 844 LSSSFPSHCTSSQSKTEPEGPVSVVNFQDLFEKDWSFLETDHLNTPE----KANLIISEA 677
           L SS     T   +    E  VSV++F+D  EKDWSFL++D  N+ E    K + IIS+ 
Sbjct: 46  LLSSSIHRLTVGAATPSNEEAVSVIDFEDFMEKDWSFLDSDGTNSEEEHKQKTDWIISKG 105

Query: 676 QIGKSCRVLLSIPSEDFVDKXXXXXXXXXXXXXXVHDSLFVLAGIKEKHDKVKCWQGELV 497
            IG++ RVL+S  +E+FVD+               HDSLFVLAGIKEK+DKVKCWQGEL+
Sbjct: 106 NIGENSRVLVSTGAEEFVDQLVDSSPCQLLLVV--HDSLFVLAGIKEKYDKVKCWQGELI 163

Query: 496 YVPDKWAPFDVVFLCYLPALPFELGQMFSVFAHLCSPGARLVVSFPQGREVVEQQRKEFP 317
           YVP+KW PFDVVFL +LPALPFEL ++F   A  C PGAR+V+S  QGREV+EQQR+++P
Sbjct: 164 YVPEKWTPFDVVFLYFLPALPFELDRIFGELAKRCLPGARVVISHLQGREVLEQQRRQYP 223

Query: 316 DVVVSDLPHKLTLEKVASDHSFEVTKFIDEPGFYLAVLKF 197
           DV++SDLP K+TL+KVA+DHSFE+T+F++EP FYLAVL F
Sbjct: 224 DVIISDLPDKMTLQKVAADHSFEMTEFVEEPSFYLAVLNF 263


>ref|XP_002530364.1| conserved hypothetical protein [Ricinus communis]
           gi|223530111|gb|EEF32025.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 276

 Score =  237 bits (605), Expect = 3e-60
 Identities = 119/225 (52%), Positives = 162/225 (72%), Gaps = 3/225 (1%)
 Frame = -2

Query: 856 HHKKLSSSFPSHCTSSQSKTEPEGPVSVVNFQDLFEKDWSFLETDHLNTPE---KANLII 686
           H   + ++ PS+          EGPVSV++F+D  EKDWSFL+ + LN+ E   K   II
Sbjct: 60  HQSSIGATVPSN---------DEGPVSVIHFEDFIEKDWSFLDFEDLNSKEHKQKVGQII 110

Query: 685 SEAQIGKSCRVLLSIPSEDFVDKXXXXXXXXXXXXXXVHDSLFVLAGIKEKHDKVKCWQG 506
           S  +I ++ R+L+SI SE+FVD+               HDSLF+LA IKEK+DKVKCWQG
Sbjct: 111 SAGEIEETSRILVSIGSEEFVDQLVDTSPKSHLFVV--HDSLFLLAMIKEKYDKVKCWQG 168

Query: 505 ELVYVPDKWAPFDVVFLCYLPALPFELGQMFSVFAHLCSPGARLVVSFPQGREVVEQQRK 326
           EL++VP+KWAP DVVFL +LP LPF+L Q+F   A  CS GAR++VS  QGREV+E+QRK
Sbjct: 169 ELIHVPEKWAPLDVVFLYFLPVLPFKLDQVFGTLAQRCSQGARVIVSHLQGREVLEKQRK 228

Query: 325 EFPDVVVSDLPHKLTLEKVASDHSFEVTKFIDEPGFYLAVLKFSG 191
           ++ DV+VS+LP K+TL+ VA+++SF+VT+++DEPG YLAVL+FSG
Sbjct: 229 QYQDVIVSELPDKMTLQNVAANNSFQVTEYVDEPGLYLAVLRFSG 273


>emb|CBI29994.3| unnamed protein product [Vitis vinifera]
          Length = 196

 Score =  233 bits (595), Expect = 4e-59
 Identities = 114/189 (60%), Positives = 146/189 (77%), Gaps = 4/189 (2%)
 Frame = -2

Query: 751 EKDWSFLETDHLNTPE----KANLIISEAQIGKSCRVLLSIPSEDFVDKXXXXXXXXXXX 584
           EKDWSFL++D  N+ E    K + IIS+  IG++ RVL+S  +E+FVD+           
Sbjct: 2   EKDWSFLDSDGTNSEEEHKQKTDWIISKGNIGENSRVLVSTGAEEFVDQLVDSSPCQLLL 61

Query: 583 XXXVHDSLFVLAGIKEKHDKVKCWQGELVYVPDKWAPFDVVFLCYLPALPFELGQMFSVF 404
               HDSLFVLAGIKEK+DKVKCWQGEL+YVP+KW PFDVVFL +LPALPFEL ++F   
Sbjct: 62  VV--HDSLFVLAGIKEKYDKVKCWQGELIYVPEKWTPFDVVFLYFLPALPFELDRIFGEL 119

Query: 403 AHLCSPGARLVVSFPQGREVVEQQRKEFPDVVVSDLPHKLTLEKVASDHSFEVTKFIDEP 224
           A  C PGAR+V+S  QGREV+EQQR+++PDV++SDLP K+TL+KVA+DHSFE+T+F++EP
Sbjct: 120 AKRCLPGARVVISHLQGREVLEQQRRQYPDVIISDLPDKMTLQKVAADHSFEMTEFVEEP 179

Query: 223 GFYLAVLKF 197
            FYLAVL F
Sbjct: 180 SFYLAVLNF 188


>ref|XP_002308356.1| predicted protein [Populus trichocarpa] gi|222854332|gb|EEE91879.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score =  233 bits (595), Expect = 4e-59
 Identities = 114/202 (56%), Positives = 150/202 (74%), Gaps = 3/202 (1%)
 Frame = -2

Query: 790 EGPVSVVNFQDLFEKDWSFLETDHLNTPE---KANLIISEAQIGKSCRVLLSIPSEDFVD 620
           EGPVSV+NF+D  EKDWSFL+++  N+ E       IIS  +I ++ RVL+S+ SE FVD
Sbjct: 72  EGPVSVINFEDFIEKDWSFLDSEESNSKEHDQNIGRIISAGRIEETSRVLVSLGSEGFVD 131

Query: 619 KXXXXXXXXXXXXXXVHDSLFVLAGIKEKHDKVKCWQGELVYVPDKWAPFDVVFLCYLPA 440
           +               HDSLF+LA +KEK+DKVKCWQGEL++V +KWAP DVVFL +LPA
Sbjct: 132 RLVDTSPCSLLLIV--HDSLFLLACVKEKYDKVKCWQGELIHVSEKWAPLDVVFLYFLPA 189

Query: 439 LPFELGQMFSVFAHLCSPGARLVVSFPQGREVVEQQRKEFPDVVVSDLPHKLTLEKVASD 260
           LPF+L ++    A  CSPGARLV+S PQGREV+EQQ+K++ DVV SDLP K+TL+K A++
Sbjct: 190 LPFKLDEVLGSLAKRCSPGARLVISHPQGREVLEQQKKQYQDVVTSDLPDKMTLQKAAAN 249

Query: 259 HSFEVTKFIDEPGFYLAVLKFS 194
           HSFE+ +++DEPGFYL VL+ S
Sbjct: 250 HSFEMVEYVDEPGFYLTVLRLS 271


>ref|XP_004136559.1| PREDICTED: uncharacterized protein LOC101219545 [Cucumis sativus]
           gi|449518537|ref|XP_004166298.1| PREDICTED:
           uncharacterized protein LOC101227832 [Cucumis sativus]
          Length = 270

 Score =  229 bits (583), Expect = 1e-57
 Identities = 119/222 (53%), Positives = 158/222 (71%), Gaps = 8/222 (3%)
 Frame = -2

Query: 835 SFPS-HCTSS---QSKTEPEGPVSVVNFQDLFEKDWSFLETDHLNTPE----KANLIISE 680
           SFP+ H ++S    S    EG VSVVNF+DL EKD+SFL++D  ++ E    K   IIS 
Sbjct: 47  SFPALHISNSIACSSTPSNEGVVSVVNFEDLVEKDFSFLDSDDFSSIEEHGQKIRRIISA 106

Query: 679 AQIGKSCRVLLSIPSEDFVDKXXXXXXXXXXXXXXVHDSLFVLAGIKEKHDKVKCWQGEL 500
            +I +S +V++SI SE FVD+               HDS+  LA IKEK+DKVKCWQGE+
Sbjct: 107 GEIVESSQVMVSISSEGFVDQLFQLAPSRSLLVV--HDSILTLACIKEKYDKVKCWQGEV 164

Query: 499 VYVPDKWAPFDVVFLCYLPALPFELGQMFSVFAHLCSPGARLVVSFPQGREVVEQQRKEF 320
           +YVP+KW PFD VFL YLPA+PFEL  +F   +  C  GARLV+S P GR+ +EQ++++F
Sbjct: 165 IYVPEKWGPFDAVFLYYLPAMPFELDAIFGALSERCVAGARLVISHPNGRKALEQEQQQF 224

Query: 319 PDVVVSDLPHKLTLEKVASDHSFEVTKFIDEPGFYLAVLKFS 194
           PDVVVSDLP ++TL+K A+DHSF++T+FIDE GFYLA+LKF+
Sbjct: 225 PDVVVSDLPDRMTLQKAAADHSFDLTEFIDEHGFYLAILKFN 266


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