BLASTX nr result

ID: Coptis25_contig00004923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004923
         (929 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631369.1| PREDICTED: uncharacterized protein LOC100246...   337   2e-90
ref|NP_196729.1| uncharacterized protein [Arabidopsis thaliana] ...   332   1e-88
gb|ADP88925.1| classical AGP [Gunnera manicata]                       330   4e-88
ref|XP_002871487.1| hypothetical protein ARALYDRAFT_909134 [Arab...   327   2e-87
ref|NP_001237530.1| uncharacterized protein LOC100500660 [Glycin...   325   9e-87

>ref|XP_003631369.1| PREDICTED: uncharacterized protein LOC100246511 [Vitis vinifera]
           gi|296085576|emb|CBI29308.3| unnamed protein product
           [Vitis vinifera]
          Length = 202

 Score =  337 bits (864), Expect = 2e-90
 Identities = 168/207 (81%), Positives = 184/207 (88%), Gaps = 3/207 (1%)
 Frame = -2

Query: 871 MAVNPQLLSPNGMPVAFVSEMFVLARDGVEFQIDKIPGTHGGHIKAKGTIYLSNIRMVFV 692
           MA+NPQL  PNGMPV F++E+ VLARDGVEF++DKIPG HGG+ KAKGTIYLSNIRMVFV
Sbjct: 1   MALNPQLF-PNGMPVPFMNEISVLARDGVEFEVDKIPGAHGGNFKAKGTIYLSNIRMVFV 59

Query: 691 ASKPVGNFAAFDMPLLYVHDEKFNQPIFYCNNISGLVEPVVPEGQHRALYSTHSFKILFK 512
           A+KPVGN  AFDMPLLYVH EKFNQPIF+CNN+SGLVEPVVPE QHRALYSTHSFKILFK
Sbjct: 60  ANKPVGNITAFDMPLLYVHGEKFNQPIFFCNNVSGLVEPVVPENQHRALYSTHSFKILFK 119

Query: 511 EGGCGTFVPLFFNLITSVRQYSQAA---PEAVSHVDPLQASQTPVDEMMRHAYVDPNDPT 341
           EGGCGTFVPLFFNLITSVR+Y++ A   PE    VDPLQA+QTPVDEMMRHAYVDPNDPT
Sbjct: 120 EGGCGTFVPLFFNLITSVRRYNELAGSGPEL--QVDPLQAAQTPVDEMMRHAYVDPNDPT 177

Query: 340 RIFLQQPIPESQLRRRSYQPHSVEQSL 260
           RIFLQQP PESQLRRR+Y  H VE S+
Sbjct: 178 RIFLQQPTPESQLRRRTY--HPVEDSI 202


>ref|NP_196729.1| uncharacterized protein [Arabidopsis thaliana]
           gi|7573382|emb|CAB87686.1| putative protein [Arabidopsis
           thaliana] gi|17065570|gb|AAL32939.1| putative protein
           [Arabidopsis thaliana] gi|17380652|gb|AAL36156.1|
           unknown protein [Arabidopsis thaliana]
           gi|20148563|gb|AAM10172.1| putative protein [Arabidopsis
           thaliana] gi|21436275|gb|AAM51276.1| unknown protein
           [Arabidopsis thaliana] gi|21593584|gb|AAM65551.1|
           unknown [Arabidopsis thaliana]
           gi|332004326|gb|AED91709.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 207

 Score =  332 bits (850), Expect = 1e-88
 Identities = 164/207 (79%), Positives = 181/207 (87%), Gaps = 6/207 (2%)
 Frame = -2

Query: 871 MAVNPQLLSPNGMPVAFVSEMFVLARDGVEFQIDKIPGTHGGHIKAKGTIYLSNIRMVFV 692
           MA+NPQLL PNGMPV FV+EMFVL RDGVEF++DKIPG HGGH+KAKG IYLSNIRMVFV
Sbjct: 1   MALNPQLL-PNGMPVPFVNEMFVLVRDGVEFEVDKIPGGHGGHVKAKGVIYLSNIRMVFV 59

Query: 691 ASKPVGNFAAFDMPLLYVHDEKFNQPIFYCNNISGLVEPVVPEGQHRALYSTHSFKILFK 512
           +SKPV NF AFDMPLLY+H EKFNQPIF+CNNI+G VEPVVPE +HRALYSTHSFKILFK
Sbjct: 60  SSKPVDNFVAFDMPLLYIHAEKFNQPIFHCNNIAGQVEPVVPENEHRALYSTHSFKILFK 119

Query: 511 EGGCGTFVPLFFNLITSVRQYS---QAAPEAVS---HVDPLQASQTPVDEMMRHAYVDPN 350
           EGGCGTFVPLF NLI+SVRQY+   Q A EA +   HVDPLQA+QTPVDEMMRHAYVDPN
Sbjct: 120 EGGCGTFVPLFLNLISSVRQYNRQMQQAAEAAAAAPHVDPLQAAQTPVDEMMRHAYVDPN 179

Query: 349 DPTRIFLQQPIPESQLRRRSYQPHSVE 269
           DPTRI+LQQP  ESQLRRR+Y   + E
Sbjct: 180 DPTRIYLQQPSGESQLRRRAYHSGAAE 206


>gb|ADP88925.1| classical AGP [Gunnera manicata]
          Length = 201

 Score =  330 bits (845), Expect = 4e-88
 Identities = 164/201 (81%), Positives = 177/201 (88%)
 Frame = -2

Query: 871 MAVNPQLLSPNGMPVAFVSEMFVLARDGVEFQIDKIPGTHGGHIKAKGTIYLSNIRMVFV 692
           MA+NPQL  PNGMPV F +E+ VLARDGVEF++DKIPG+ GG +KAKGTIYLSNIRMVFV
Sbjct: 1   MALNPQLF-PNGMPVPFTNEVSVLARDGVEFEVDKIPGSQGGSVKAKGTIYLSNIRMVFV 59

Query: 691 ASKPVGNFAAFDMPLLYVHDEKFNQPIFYCNNISGLVEPVVPEGQHRALYSTHSFKILFK 512
           A+KP GNF AFDMPLLYV  EKFNQPIF CNNISG VEPVVPE QHRALYSTHSFKILFK
Sbjct: 60  ANKPHGNFTAFDMPLLYVRGEKFNQPIFLCNNISGQVEPVVPENQHRALYSTHSFKILFK 119

Query: 511 EGGCGTFVPLFFNLITSVRQYSQAAPEAVSHVDPLQASQTPVDEMMRHAYVDPNDPTRIF 332
           EGGCGTFVPLFFNLITSVRQY+Q +   V +VDPLQA+QTPVDEMMRHAYVDPNDPTRIF
Sbjct: 120 EGGCGTFVPLFFNLITSVRQYNQLSVPVV-NVDPLQAAQTPVDEMMRHAYVDPNDPTRIF 178

Query: 331 LQQPIPESQLRRRSYQPHSVE 269
           LQQP P S+LRRRSYQ   VE
Sbjct: 179 LQQPTPGSELRRRSYQSRPVE 199


>ref|XP_002871487.1| hypothetical protein ARALYDRAFT_909134 [Arabidopsis lyrata subsp.
           lyrata] gi|297317324|gb|EFH47746.1| hypothetical protein
           ARALYDRAFT_909134 [Arabidopsis lyrata subsp. lyrata]
          Length = 207

 Score =  327 bits (839), Expect = 2e-87
 Identities = 162/207 (78%), Positives = 180/207 (86%), Gaps = 6/207 (2%)
 Frame = -2

Query: 871 MAVNPQLLSPNGMPVAFVSEMFVLARDGVEFQIDKIPGTHGGHIKAKGTIYLSNIRMVFV 692
           MA+NPQLL PNG+P+ FV+EMFVL RDGVEF++DKIPG HGGH+KAKG IYLSNIRMVFV
Sbjct: 1   MALNPQLL-PNGIPIPFVNEMFVLVRDGVEFEVDKIPGGHGGHVKAKGVIYLSNIRMVFV 59

Query: 691 ASKPVGNFAAFDMPLLYVHDEKFNQPIFYCNNISGLVEPVVPEGQHRALYSTHSFKILFK 512
           ASKPV NF AFDMPLLY+H EKFNQPIF+CNNISG VEPVVPE +HRALYSTHSFKILFK
Sbjct: 60  ASKPVDNFVAFDMPLLYIHAEKFNQPIFHCNNISGQVEPVVPENEHRALYSTHSFKILFK 119

Query: 511 EGGCGTFVPLFFNLITSVRQYS---QAAPEAVS---HVDPLQASQTPVDEMMRHAYVDPN 350
           EGGCGTFVPLF NLI+SVRQY+   Q A EA +    VDPLQA+QTPV+EMMRHAYVDPN
Sbjct: 120 EGGCGTFVPLFLNLISSVRQYNRQMQQAAEAAAAAPRVDPLQAAQTPVEEMMRHAYVDPN 179

Query: 349 DPTRIFLQQPIPESQLRRRSYQPHSVE 269
           DPTRI+LQQP  ESQLRRR+Y   + E
Sbjct: 180 DPTRIYLQQPSGESQLRRRAYHSGAAE 206


>ref|NP_001237530.1| uncharacterized protein LOC100500660 [Glycine max]
           gi|255630875|gb|ACU15800.1| unknown [Glycine max]
          Length = 206

 Score =  325 bits (833), Expect = 9e-87
 Identities = 158/202 (78%), Positives = 178/202 (88%), Gaps = 3/202 (1%)
 Frame = -2

Query: 871 MAVNPQLLSPNGMPVAFVSEMFVLARDGVEFQIDKIP--GTHGGHIKAKGTIYLSNIRMV 698
           MA+NPQL  PNGMPV FV+EMFVLARDGVEF++DKIP  G HGG++K KG +YLSNIRMV
Sbjct: 1   MALNPQLF-PNGMPVPFVNEMFVLARDGVEFEVDKIPASGNHGGNLKTKGIVYLSNIRMV 59

Query: 697 FVASKPVGNFAAFDMPLLYVHDEKFNQPIFYCNNISGLVEPVVPEGQHRALYSTHSFKIL 518
           FVA  PVG+F AFDMPLLY+H EKFNQPIF+CNN+SG VEPVVP  QHRALYSTHSFKIL
Sbjct: 60  FVAKSPVGHFTAFDMPLLYIHGEKFNQPIFHCNNLSGHVEPVVPNDQHRALYSTHSFKIL 119

Query: 517 FKEGGCGTFVPLFFNLITSVRQYSQ-AAPEAVSHVDPLQASQTPVDEMMRHAYVDPNDPT 341
           FKEGGCGTF+PLFFNLITSVRQY+Q    +  ++VDPLQASQTPVDEMMRHAYVDPNDPT
Sbjct: 120 FKEGGCGTFIPLFFNLITSVRQYNQHTNMQTQNYVDPLQASQTPVDEMMRHAYVDPNDPT 179

Query: 340 RIFLQQPIPESQLRRRSYQPHS 275
           +IFLQQP  +SQLRRR+YQP +
Sbjct: 180 KIFLQQPNSDSQLRRRTYQPQA 201


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