BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004910
         (942 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277389.1| PREDICTED: DNA-(apurinic or apyrimidinic sit...   468   e-129
ref|XP_004157772.1| PREDICTED: LOW QUALITY PROTEIN: DNA-(apurini...   460   e-127
ref|XP_004152506.1| PREDICTED: DNA-(apurinic or apyrimidinic sit...   460   e-127
ref|XP_002321664.1| predicted protein [Populus trichocarpa] gi|2...   457   e-126
ref|XP_003523126.1| PREDICTED: exodeoxyribonuclease-like [Glycin...   444   e-122

>ref|XP_002277389.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Vitis
           vinifera] gi|297733638|emb|CBI14885.3| unnamed protein
           product [Vitis vinifera]
          Length = 357

 Score =  468 bits (1203), Expect = e-129
 Identities = 222/299 (74%), Positives = 254/299 (84%)
 Frame = +2

Query: 44  FFQPVNKDGSLFKKPNLSPTPAPVDKADXXXXXXXXXXPLKFVTWNANSFLLRVKNNWPQ 223
           +FQP+ KDGS  KKP+LS      D+            PLKF+TWNANSFL+RVKNNWP+
Sbjct: 4   YFQPIGKDGSS-KKPSLSKEDG--DENTDQVSEEEKKEPLKFLTWNANSFLIRVKNNWPE 60

Query: 224 FTSFIHKLDPDVIAIQEVRMPAAGSKGSAKNPGELKDDTTSSGQEKQILMRAISSPPFQN 403
           FT F+  LDPDVIA+QEVRMPAAGSKG+ KN GELKDDT+SS +EK+ILM A+S PPF N
Sbjct: 61  FTKFVSDLDPDVIAVQEVRMPAAGSKGAPKNHGELKDDTSSSREEKKILMHALSRPPFGN 120

Query: 404 YQVWWSLSDSKYAGTGLLIKKCFRPKKVSFSLNQTVPSKHEADGRVILAEFESFRLLNTY 583
           Y+VWWSL+DSKYAGT L +KKCF+PKKVSFS++Q   SKHE +GRVILAEFESFRLLNTY
Sbjct: 121 YRVWWSLADSKYAGTALFVKKCFQPKKVSFSIDQKA-SKHEPEGRVILAEFESFRLLNTY 179

Query: 584 VPNNGWKEDETSFQRRRKWDKRIHEFVTQSTDKPLIWCGDLNVSHQEIDVSHPDFFSSAK 763
           VPNNGWK++ETSFQRRRKWDKR+ EFV QS+DKPLIWCGDLNVSH+EIDVSHP+FFS+AK
Sbjct: 180 VPNNGWKDEETSFQRRRKWDKRMLEFVVQSSDKPLIWCGDLNVSHEEIDVSHPEFFSAAK 239

Query: 764 QNGYCPPNKEDCGQPGFTLNERKRFGTILSEGKLIDAYRFLHKEKDMDRGFSWSGNPVG 940
            NGY PPNKEDCGQPGFTL ER+RFG IL EGKL+DAYR LHKEKDM+ GFSWSGNP+G
Sbjct: 240 HNGYVPPNKEDCGQPGFTLAERRRFGGILKEGKLVDAYRLLHKEKDMEGGFSWSGNPIG 298


>ref|XP_004157772.1| PREDICTED: LOW QUALITY PROTEIN: DNA-(apurinic or apyrimidinic site)
           lyase-like [Cucumis sativus]
          Length = 361

 Score =  460 bits (1184), Expect = e-127
 Identities = 220/299 (73%), Positives = 251/299 (83%)
 Frame = +2

Query: 44  FFQPVNKDGSLFKKPNLSPTPAPVDKADXXXXXXXXXXPLKFVTWNANSFLLRVKNNWPQ 223
           FF+P+ K+GS  KK  LSP+    D  D          PLKFVTWNANS LLRVKN+W +
Sbjct: 4   FFKPIEKEGSS-KKVALSPSLKDGDDGDSEASVPDKKEPLKFVTWNANSLLLRVKNDWSE 62

Query: 224 FTSFIHKLDPDVIAIQEVRMPAAGSKGSAKNPGELKDDTTSSGQEKQILMRAISSPPFQN 403
           FT F+  LDPD IAIQEVR+PAAGSKG++KN GELKDDT +S +EKQ+LMRA+SSPPF N
Sbjct: 63  FTKFVTNLDPDAIAIQEVRIPAAGSKGASKNQGELKDDTNTSREEKQMLMRALSSPPFAN 122

Query: 404 YQVWWSLSDSKYAGTGLLIKKCFRPKKVSFSLNQTVPSKHEADGRVILAEFESFRLLNTY 583
           Y+VWWSLSDSKYAGT L IKKCF+PKKV F+L++ + SKHE DGRVILAEFE+FRLLNTY
Sbjct: 123 YRVWWSLSDSKYAGTALFIKKCFQPKKVXFNLDR-IASKHEVDGRVILAEFETFRLLNTY 181

Query: 584 VPNNGWKEDETSFQRRRKWDKRIHEFVTQSTDKPLIWCGDLNVSHQEIDVSHPDFFSSAK 763
            PNNGWKE+E SF+RRRKWDKR+ EFV QS+DKPLIWCGDLNVSH+EIDVSHPDFFS+AK
Sbjct: 182 SPNNGWKEEEKSFKRRRKWDKRMLEFVIQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAK 241

Query: 764 QNGYCPPNKEDCGQPGFTLNERKRFGTILSEGKLIDAYRFLHKEKDMDRGFSWSGNPVG 940
            NGY PPNKEDCGQPGFTL ER RF  IL EGKLIDA+RFLHKEKDM+RGFSWSG+P+G
Sbjct: 242 LNGYIPPNKEDCGQPGFTLAERNRFNAILKEGKLIDAHRFLHKEKDMERGFSWSGHPIG 300


>ref|XP_004152506.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like [Cucumis
           sativus]
          Length = 361

 Score =  460 bits (1183), Expect = e-127
 Identities = 220/299 (73%), Positives = 251/299 (83%)
 Frame = +2

Query: 44  FFQPVNKDGSLFKKPNLSPTPAPVDKADXXXXXXXXXXPLKFVTWNANSFLLRVKNNWPQ 223
           FF+P+ K+GS  KK  LSP+    D  D          PLKFVTWNANS LLRVKN+W +
Sbjct: 4   FFKPIEKEGSS-KKVALSPSLKDGDDGDSEASVPDKKEPLKFVTWNANSLLLRVKNDWSE 62

Query: 224 FTSFIHKLDPDVIAIQEVRMPAAGSKGSAKNPGELKDDTTSSGQEKQILMRAISSPPFQN 403
           FT F+  LDPD IAIQEVR+PAAGSKG++KN GELKDDT +S +EKQ+LMRA+SSPPF N
Sbjct: 63  FTKFVTNLDPDAIAIQEVRIPAAGSKGASKNQGELKDDTNTSREEKQMLMRALSSPPFAN 122

Query: 404 YQVWWSLSDSKYAGTGLLIKKCFRPKKVSFSLNQTVPSKHEADGRVILAEFESFRLLNTY 583
           Y+VWWSLSDSKYAGT L IKKCF+PKKV F+L++ + SKHE DGRVILAEFE+FRLLNTY
Sbjct: 123 YRVWWSLSDSKYAGTALFIKKCFQPKKVFFNLDR-IASKHEVDGRVILAEFETFRLLNTY 181

Query: 584 VPNNGWKEDETSFQRRRKWDKRIHEFVTQSTDKPLIWCGDLNVSHQEIDVSHPDFFSSAK 763
            PNNGWKE+E SF+RRRKWDKR+ EFV QS+DKPLIWCGDLNVSH+EIDVSHPDFFS+AK
Sbjct: 182 SPNNGWKEEEKSFKRRRKWDKRMLEFVIQSSDKPLIWCGDLNVSHEEIDVSHPDFFSAAK 241

Query: 764 QNGYCPPNKEDCGQPGFTLNERKRFGTILSEGKLIDAYRFLHKEKDMDRGFSWSGNPVG 940
            NGY PPNKEDCGQPGFTL ER RF  IL EGKLIDA+RFLHKEKDM+RGFSWSG+P+G
Sbjct: 242 LNGYIPPNKEDCGQPGFTLAERNRFNAILKEGKLIDAHRFLHKEKDMERGFSWSGHPIG 300


>ref|XP_002321664.1| predicted protein [Populus trichocarpa] gi|222868660|gb|EEF05791.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  457 bits (1177), Expect = e-126
 Identities = 220/306 (71%), Positives = 250/306 (81%), Gaps = 7/306 (2%)
 Frame = +2

Query: 44  FFQPVNKDGSLFKKPNLSPTPAPVDKADXXXXXXXXXX-------PLKFVTWNANSFLLR 202
           FF+P+ KDGS  KKP LS      +K +                 PLKF+TWNANS LLR
Sbjct: 4   FFKPIEKDGSA-KKPTLSTNQEDNEKKEASESEETNNNGNTMKKEPLKFITWNANSLLLR 62

Query: 203 VKNNWPQFTSFIHKLDPDVIAIQEVRMPAAGSKGSAKNPGELKDDTTSSGQEKQILMRAI 382
           VKNNWP F+ F+  +DPDVI IQEVRMPAAGSKG+ KN GE+KDDT SS +EK+ILMRA+
Sbjct: 63  VKNNWPGFSKFVSDIDPDVIVIQEVRMPAAGSKGAPKNSGEIKDDTNSSREEKKILMRAL 122

Query: 383 SSPPFQNYQVWWSLSDSKYAGTGLLIKKCFRPKKVSFSLNQTVPSKHEADGRVILAEFES 562
           SS PF NY VWWSL+DSKYAGT LL+KKCF+P KVSF+L+QT  SKHE DGRVILAEF++
Sbjct: 123 SSSPFGNYNVWWSLADSKYAGTALLVKKCFQPVKVSFALDQTA-SKHEPDGRVILAEFKT 181

Query: 563 FRLLNTYVPNNGWKEDETSFQRRRKWDKRIHEFVTQSTDKPLIWCGDLNVSHQEIDVSHP 742
           FRLLNTY PNNGWKE+E SFQRRRKWDKR+ E V Q +DKPLIWCGDLNVSH+EIDVSHP
Sbjct: 182 FRLLNTYAPNNGWKEEEKSFQRRRKWDKRMLEVVVQLSDKPLIWCGDLNVSHEEIDVSHP 241

Query: 743 DFFSSAKQNGYCPPNKEDCGQPGFTLNERKRFGTILSEGKLIDAYRFLHKEKDMDRGFSW 922
           +FFS+AK NGY PPNKEDCGQPGFTL+ERKRFG IL EGKLIDAYRFLHKE+DM+RGFSW
Sbjct: 242 EFFSAAKVNGYVPPNKEDCGQPGFTLSERKRFGAILKEGKLIDAYRFLHKERDMERGFSW 301

Query: 923 SGNPVG 940
           SGNP+G
Sbjct: 302 SGNPIG 307


>ref|XP_003523126.1| PREDICTED: exodeoxyribonuclease-like [Glycine max]
          Length = 355

 Score =  444 bits (1143), Expect = e-122
 Identities = 216/301 (71%), Positives = 250/301 (83%), Gaps = 2/301 (0%)
 Frame = +2

Query: 44  FFQPVNKD--GSLFKKPNLSPTPAPVDKADXXXXXXXXXXPLKFVTWNANSFLLRVKNNW 217
           FF+ V KD  GS+ KKP  + + A                PLKF+TWNANSFLLRVKNNW
Sbjct: 4   FFKVVEKDSDGSV-KKPRENDSEAEESNEKKE--------PLKFMTWNANSFLLRVKNNW 54

Query: 218 PQFTSFIHKLDPDVIAIQEVRMPAAGSKGSAKNPGELKDDTTSSGQEKQILMRAISSPPF 397
           P FT+ I   DPD+IAIQEVRMPAAG+KG++K  GE+KDDT+++ +EK+IL RA+S+PPF
Sbjct: 55  PDFTNLITTFDPDLIAIQEVRMPAAGAKGASKIQGEIKDDTSAAREEKKILTRALSAPPF 114

Query: 398 QNYQVWWSLSDSKYAGTGLLIKKCFRPKKVSFSLNQTVPSKHEADGRVILAEFESFRLLN 577
            NY VWWSL+DSKYAGT LL+KKCF+PK V F+L++ + SKHE DGRVIL EFE+ RLLN
Sbjct: 115 GNYHVWWSLADSKYAGTALLVKKCFKPKSVVFNLDK-LASKHEPDGRVILVEFETLRLLN 173

Query: 578 TYVPNNGWKEDETSFQRRRKWDKRIHEFVTQSTDKPLIWCGDLNVSHQEIDVSHPDFFSS 757
           TYVPNNGWKE+  SFQRRRKWDKRI EFVTQS+DKPLIWCGDLNVSH+EIDVSHPDFFS 
Sbjct: 174 TYVPNNGWKEEANSFQRRRKWDKRILEFVTQSSDKPLIWCGDLNVSHEEIDVSHPDFFSV 233

Query: 758 AKQNGYCPPNKEDCGQPGFTLNERKRFGTILSEGKLIDAYRFLHKEKDMDRGFSWSGNPV 937
           AK NGY PPNKEDCGQPGFTL+ERKRFGTIL EGKL+DAYRFLH++KDM+RGFSWSGNPV
Sbjct: 234 AKLNGYIPPNKEDCGQPGFTLSERKRFGTILREGKLVDAYRFLHEDKDMERGFSWSGNPV 293

Query: 938 G 940
           G
Sbjct: 294 G 294