BLASTX nr result

ID: Coptis25_contig00004909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004909
         (1036 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271650.1| PREDICTED: ELMO domain-containing protein A ...   410   e-112
ref|XP_003552489.1| PREDICTED: ELMO domain-containing protein A-...   406   e-111
ref|XP_002526467.1| ELMO domain-containing protein, putative [Ri...   404   e-110
ref|XP_003534475.1| PREDICTED: ELMO domain-containing protein A-...   403   e-110
ref|XP_003624290.1| ELMO domain-containing protein A [Medicago t...   402   e-110

>ref|XP_002271650.1| PREDICTED: ELMO domain-containing protein A [Vitis vinifera]
          Length = 267

 Score =  410 bits (1055), Expect = e-112
 Identities = 204/263 (77%), Positives = 225/263 (85%), Gaps = 2/263 (0%)
 Frame = -1

Query: 1036 GGGSFVAVRRIEH--TSGCSTHXXXXXXXXXXXAWLGRGLSCVCAQRRDSDARPSFDLTP 863
            GGGSFVAVRRI      G + H           AWLGRGLSCVCAQRR+SDARPSFDLTP
Sbjct: 5    GGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSFDLTP 64

Query: 862  SQDECLQRLQRRLYVPYDSSNSEHQETLRALWSAAYPGEELSGLISEQWKEMGWQGKDPS 683
            +Q+ECLQRLQ R+ V YDSS SEHQE LRALW+A++P EEL  LISEQWKEMGWQGKDPS
Sbjct: 65   AQEECLQRLQSRIEVSYDSSISEHQEALRALWNASFPEEELRDLISEQWKEMGWQGKDPS 124

Query: 682  TDFRGGGYISVENLLFFARAYPQSFQDLLQKQEGERALWEYPFAVAGVNITFMLIQMLDL 503
            TDFRGGG+IS+ENLLFFAR YP+SFQDLL+KQEG+RALWEYPFAVAGVNITFMLIQMLDL
Sbjct: 125  TDFRGGGFISLENLLFFARNYPKSFQDLLRKQEGDRALWEYPFAVAGVNITFMLIQMLDL 184

Query: 502  EAVKPRTWMGAVFLKFLSENVSAFDILYCMAFKLMDQQWLEMRASYMDFNMVMKSTRRQI 323
            EAVKPR+  GA+FLKFLSEN SAFD+LYC+ FKLMD QWL M ASYMDFN VMKSTR Q+
Sbjct: 185  EAVKPRSMAGAIFLKFLSENESAFDLLYCITFKLMDNQWLAMHASYMDFNTVMKSTRCQL 244

Query: 322  ERELLLEDITRLEDMPSYSLLQR 254
            ERELLLED++RLED+PSYSLL R
Sbjct: 245  ERELLLEDVSRLEDLPSYSLLTR 267


>ref|XP_003552489.1| PREDICTED: ELMO domain-containing protein A-like [Glycine max]
          Length = 266

 Score =  406 bits (1043), Expect = e-111
 Identities = 200/262 (76%), Positives = 223/262 (85%), Gaps = 2/262 (0%)
 Frame = -1

Query: 1033 GGSFVAVRRIEHTSGCST--HXXXXXXXXXXXAWLGRGLSCVCAQRRDSDARPSFDLTPS 860
            GGSFVAVRRI      S   H           AWLGRGLSCVCAQRR+SDARPSFDLTP+
Sbjct: 5    GGSFVAVRRISQGLDRSNTCHSSSAEFVTGSTAWLGRGLSCVCAQRRESDARPSFDLTPA 64

Query: 859  QDECLQRLQRRLYVPYDSSNSEHQETLRALWSAAYPGEELSGLISEQWKEMGWQGKDPST 680
            Q+ECLQRLQ R+ +PYD S  EHQ+ LRALWSAA+P EEL GLISEQWK MGWQGKDPST
Sbjct: 65   QEECLQRLQNRIDIPYDGSIPEHQDALRALWSAAFPEEELHGLISEQWKNMGWQGKDPST 124

Query: 679  DFRGGGYISVENLLFFARAYPQSFQDLLQKQEGERALWEYPFAVAGVNITFMLIQMLDLE 500
            DFRGGG+IS+ENLLFFAR +P+SFQDLL+KQEG+R++WEYPFAVAGVNITFMLIQMLDLE
Sbjct: 125  DFRGGGFISLENLLFFARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLE 184

Query: 499  AVKPRTWMGAVFLKFLSENVSAFDILYCMAFKLMDQQWLEMRASYMDFNMVMKSTRRQIE 320
            AVKPRT +GA FLKFL+EN SAFD+LYC+ FK+MDQQWL MRASYMDFN VMKSTRRQ+E
Sbjct: 185  AVKPRTLVGATFLKFLAENDSAFDLLYCITFKMMDQQWLSMRASYMDFNTVMKSTRRQLE 244

Query: 319  RELLLEDITRLEDMPSYSLLQR 254
            +ELLLEDI RLED+PSY LL R
Sbjct: 245  KELLLEDIMRLEDVPSYKLLTR 266


>ref|XP_002526467.1| ELMO domain-containing protein, putative [Ricinus communis]
            gi|223534142|gb|EEF35858.1| ELMO domain-containing
            protein, putative [Ricinus communis]
          Length = 267

 Score =  404 bits (1038), Expect = e-110
 Identities = 203/263 (77%), Positives = 224/263 (85%), Gaps = 3/263 (1%)
 Frame = -1

Query: 1033 GGSFVAVRRIEH--TSGCST-HXXXXXXXXXXXAWLGRGLSCVCAQRRDSDARPSFDLTP 863
            GGSFVAVRRI      G +T H           AWLGRGLSCVCAQRR+SDARPSFDLT 
Sbjct: 5    GGSFVAVRRISQGLERGSNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSFDLTL 64

Query: 862  SQDECLQRLQRRLYVPYDSSNSEHQETLRALWSAAYPGEELSGLISEQWKEMGWQGKDPS 683
            +Q+ECLQRLQ R+ V YDSS  EHQE LRALW+AA+P EEL GLISEQWKEMGWQGKDPS
Sbjct: 65   TQEECLQRLQSRIDVAYDSSIPEHQEALRALWNAAFPEEELRGLISEQWKEMGWQGKDPS 124

Query: 682  TDFRGGGYISVENLLFFARAYPQSFQDLLQKQEGERALWEYPFAVAGVNITFMLIQMLDL 503
            TDFRGGG+IS+ENLLFFA+ +P SFQDLLQK+EG+R++WEYPFAVAGVNITFMLIQMLDL
Sbjct: 125  TDFRGGGFISLENLLFFAKNFPTSFQDLLQKREGDRSVWEYPFAVAGVNITFMLIQMLDL 184

Query: 502  EAVKPRTWMGAVFLKFLSENVSAFDILYCMAFKLMDQQWLEMRASYMDFNMVMKSTRRQI 323
            EAVKPRT +GAVFLKFL+EN SAFD+LYC+ FKLMD QWL M ASYMDFN VMKSTRRQ+
Sbjct: 185  EAVKPRTMVGAVFLKFLTENESAFDLLYCITFKLMDHQWLNMHASYMDFNTVMKSTRRQL 244

Query: 322  ERELLLEDITRLEDMPSYSLLQR 254
            ERELLLEDITRLED+PSY LL R
Sbjct: 245  ERELLLEDITRLEDLPSYGLLTR 267


>ref|XP_003534475.1| PREDICTED: ELMO domain-containing protein A-like [Glycine max]
          Length = 266

 Score =  403 bits (1035), Expect = e-110
 Identities = 198/262 (75%), Positives = 223/262 (85%), Gaps = 2/262 (0%)
 Frame = -1

Query: 1033 GGSFVAVRRIEHTSGCST--HXXXXXXXXXXXAWLGRGLSCVCAQRRDSDARPSFDLTPS 860
            GGSFVAVRRI      S   H           AWLGRGLSCVCAQRR+SDARPSFDLTP+
Sbjct: 5    GGSFVAVRRISQGLDRSNTCHSSSAEFVTGSTAWLGRGLSCVCAQRRESDARPSFDLTPA 64

Query: 859  QDECLQRLQRRLYVPYDSSNSEHQETLRALWSAAYPGEELSGLISEQWKEMGWQGKDPST 680
            Q+ECLQRLQ R+ +PYD S  EHQ+ LR LW+AA+P EEL GLISEQWK+MGWQGKDPST
Sbjct: 65   QEECLQRLQSRIDIPYDGSVPEHQDALRDLWNAAFPEEELHGLISEQWKDMGWQGKDPST 124

Query: 679  DFRGGGYISVENLLFFARAYPQSFQDLLQKQEGERALWEYPFAVAGVNITFMLIQMLDLE 500
            DFRGGG+IS+ENLLFFAR +P+SFQDLL+KQEG+R++WEYPFAVAGVNITFMLIQMLDLE
Sbjct: 125  DFRGGGFISLENLLFFARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLE 184

Query: 499  AVKPRTWMGAVFLKFLSENVSAFDILYCMAFKLMDQQWLEMRASYMDFNMVMKSTRRQIE 320
            AVKPRT +GA FLKFL+EN SAFD+LYC+ FK+MDQQWL MRASYMDFN VMKSTRRQ+E
Sbjct: 185  AVKPRTLVGATFLKFLAENDSAFDLLYCITFKMMDQQWLSMRASYMDFNTVMKSTRRQLE 244

Query: 319  RELLLEDITRLEDMPSYSLLQR 254
            +ELLLEDI RLED+PSY LL R
Sbjct: 245  KELLLEDIMRLEDVPSYKLLTR 266


>ref|XP_003624290.1| ELMO domain-containing protein A [Medicago truncatula]
            gi|124359479|gb|ABN05917.1| Engulfment and cell motility,
            ELM [Medicago truncatula] gi|355499305|gb|AES80508.1|
            ELMO domain-containing protein A [Medicago truncatula]
          Length = 266

 Score =  402 bits (1032), Expect = e-110
 Identities = 198/262 (75%), Positives = 224/262 (85%), Gaps = 2/262 (0%)
 Frame = -1

Query: 1033 GGSFVAVRRIEH--TSGCSTHXXXXXXXXXXXAWLGRGLSCVCAQRRDSDARPSFDLTPS 860
            GGSFVAVRRI      G + H           AW+GRGLSCVCAQRR+SDAR SFDLTP 
Sbjct: 5    GGSFVAVRRISQGLDRGNAYHSSSAEFVTGSTAWIGRGLSCVCAQRRESDARLSFDLTPY 64

Query: 859  QDECLQRLQRRLYVPYDSSNSEHQETLRALWSAAYPGEELSGLISEQWKEMGWQGKDPST 680
            Q+ECLQRLQ R+ VPYDSS  EHQ +LRALW+AA+P EEL+GLISEQWK+MGWQGKDPST
Sbjct: 65   QEECLQRLQSRIDVPYDSSIPEHQASLRALWNAAFPEEELNGLISEQWKDMGWQGKDPST 124

Query: 679  DFRGGGYISVENLLFFARAYPQSFQDLLQKQEGERALWEYPFAVAGVNITFMLIQMLDLE 500
            DFRGGGYIS+ENLLFFAR +P+SFQDLL+KQEG+R++WEYPFAVAGVNITFMLIQMLDLE
Sbjct: 125  DFRGGGYISLENLLFFARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLE 184

Query: 499  AVKPRTWMGAVFLKFLSENVSAFDILYCMAFKLMDQQWLEMRASYMDFNMVMKSTRRQIE 320
            AVKPRT +GA FLKFL+EN SAFD+LYC+ FKLMD QWL M ASYMDFN VMKSTRRQ+E
Sbjct: 185  AVKPRTLVGATFLKFLAENESAFDLLYCITFKLMDNQWLSMHASYMDFNTVMKSTRRQLE 244

Query: 319  RELLLEDITRLEDMPSYSLLQR 254
            +ELLLED+T+LED+PSY LL R
Sbjct: 245  KELLLEDLTQLEDVPSYKLLTR 266


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