BLASTX nr result

ID: Coptis25_contig00004908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004908
         (2635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26975.3| unnamed protein product [Vitis vinifera]              565   e-158
ref|XP_002283677.1| PREDICTED: uncharacterized protein LOC100264...   565   e-158
ref|XP_002314838.1| predicted protein [Populus trichocarpa] gi|2...   560   e-157
ref|XP_002526281.1| conserved hypothetical protein [Ricinus comm...   545   e-152
gb|ACJ84556.1| unknown [Medicago truncatula]                          532   e-148

>emb|CBI26975.3| unnamed protein product [Vitis vinifera]
          Length = 390

 Score =  565 bits (1457), Expect = e-158
 Identities = 280/354 (79%), Positives = 321/354 (90%), Gaps = 1/354 (0%)
 Frame = -2

Query: 1311 QSLGHLMSVPGASNTVLEAVVPYSRISMLQLLNKLPTQFASKQTAEDMALSAYNRALKLS 1132
            Q+LGHLMSVPGASNTVLE+VVPYSR+SM+QLL ++PT FAS+QTAE+MAL AYNRALKLS
Sbjct: 29   QALGHLMSVPGASNTVLESVVPYSRMSMIQLLGRIPTHFASQQTAEEMALLAYNRALKLS 88

Query: 1131 SPGLSVLGVGFTGSLASTRPKQGDHRFYLSTRTSDRLWVSGVTLSKGLRTREQEDTVSSR 952
            +PG  VLGVGFTGSLASTRPK+GDHRF+LSTRTSDRLW S VTLSKGLRTREQE+ VSS 
Sbjct: 89   NPGSPVLGVGFTGSLASTRPKRGDHRFHLSTRTSDRLWASTVTLSKGLRTREQEEKVSSL 148

Query: 951  FLLKAVGDACKVSSTFVSELTETEVPDEREKLFSEDEELQQLIDGEICMKVYPFSNESHV 772
             LLKA+  ACKV +TFVSELTE+EV +E EK F+EDEEL+QLI+G+IC KVYPFS+E++ 
Sbjct: 149  CLLKAIAYACKVPATFVSELTESEVYEECEKQFNEDEELEQLINGQICFKVYPFSSEANK 208

Query: 771  STSEKKIILSGSFNPLHDGHLRLLEVATSICD-DGYPCFEISAINADKPPLTVSQIKERV 595
            S +++KIILSGSFNPLHDGHL+LL+VATSIC  DGYPCFEISA+NADKPPLTVSQIKERV
Sbjct: 209  SNADRKIILSGSFNPLHDGHLKLLDVATSICGRDGYPCFEISAVNADKPPLTVSQIKERV 268

Query: 594  KQFEKAGKTVIISSQPYFYKKAELFPGSAFVIGADTAARLINPKYYGGDHNKMLEILNGC 415
            KQFE+ GKTVIIS+QPYFYKKAELFPGSAFVIGADT  RLINPKYY G + KMLEIL GC
Sbjct: 269  KQFERVGKTVIISTQPYFYKKAELFPGSAFVIGADTVVRLINPKYYDGSNQKMLEILGGC 328

Query: 414  QKLGCTFLVGGRNVDGIFKVLEDLEIPAELKDLFISIPEERFRVDVSSTELRKK 253
            ++ GC FLVGGRN+DG+FKVLEDLEIP ELKD+FI IP ERFR+D+SSTE+R+K
Sbjct: 329  KRTGCIFLVGGRNIDGVFKVLEDLEIPEELKDMFIPIPAERFRMDISSTEIRQK 382


>ref|XP_002283677.1| PREDICTED: uncharacterized protein LOC100264619 [Vitis vinifera]
          Length = 391

 Score =  565 bits (1457), Expect = e-158
 Identities = 280/354 (79%), Positives = 321/354 (90%), Gaps = 1/354 (0%)
 Frame = -2

Query: 1311 QSLGHLMSVPGASNTVLEAVVPYSRISMLQLLNKLPTQFASKQTAEDMALSAYNRALKLS 1132
            Q+LGHLMSVPGASNTVLE+VVPYSR+SM+QLL ++PT FAS+QTAE+MAL AYNRALKLS
Sbjct: 30   QALGHLMSVPGASNTVLESVVPYSRMSMIQLLGRIPTHFASQQTAEEMALLAYNRALKLS 89

Query: 1131 SPGLSVLGVGFTGSLASTRPKQGDHRFYLSTRTSDRLWVSGVTLSKGLRTREQEDTVSSR 952
            +PG  VLGVGFTGSLASTRPK+GDHRF+LSTRTSDRLW S VTLSKGLRTREQE+ VSS 
Sbjct: 90   NPGSPVLGVGFTGSLASTRPKRGDHRFHLSTRTSDRLWASTVTLSKGLRTREQEEKVSSL 149

Query: 951  FLLKAVGDACKVSSTFVSELTETEVPDEREKLFSEDEELQQLIDGEICMKVYPFSNESHV 772
             LLKA+  ACKV +TFVSELTE+EV +E EK F+EDEEL+QLI+G+IC KVYPFS+E++ 
Sbjct: 150  CLLKAIAYACKVPATFVSELTESEVYEECEKQFNEDEELEQLINGQICFKVYPFSSEANK 209

Query: 771  STSEKKIILSGSFNPLHDGHLRLLEVATSICD-DGYPCFEISAINADKPPLTVSQIKERV 595
            S +++KIILSGSFNPLHDGHL+LL+VATSIC  DGYPCFEISA+NADKPPLTVSQIKERV
Sbjct: 210  SNADRKIILSGSFNPLHDGHLKLLDVATSICGRDGYPCFEISAVNADKPPLTVSQIKERV 269

Query: 594  KQFEKAGKTVIISSQPYFYKKAELFPGSAFVIGADTAARLINPKYYGGDHNKMLEILNGC 415
            KQFE+ GKTVIIS+QPYFYKKAELFPGSAFVIGADT  RLINPKYY G + KMLEIL GC
Sbjct: 270  KQFERVGKTVIISTQPYFYKKAELFPGSAFVIGADTVVRLINPKYYDGSNQKMLEILGGC 329

Query: 414  QKLGCTFLVGGRNVDGIFKVLEDLEIPAELKDLFISIPEERFRVDVSSTELRKK 253
            ++ GC FLVGGRN+DG+FKVLEDLEIP ELKD+FI IP ERFR+D+SSTE+R+K
Sbjct: 330  KRTGCIFLVGGRNIDGVFKVLEDLEIPEELKDMFIPIPAERFRMDISSTEIRQK 383


>ref|XP_002314838.1| predicted protein [Populus trichocarpa] gi|222863878|gb|EEF01009.1|
            predicted protein [Populus trichocarpa]
          Length = 385

 Score =  560 bits (1444), Expect = e-157
 Identities = 273/356 (76%), Positives = 318/356 (89%)
 Frame = -2

Query: 1311 QSLGHLMSVPGASNTVLEAVVPYSRISMLQLLNKLPTQFASKQTAEDMALSAYNRALKLS 1132
            Q+LG L+SVPGASNTVLEAVVPYSR+S +QLL K+P+Q  S+QTAE+MAL AYNR LKLS
Sbjct: 30   QALGWLLSVPGASNTVLEAVVPYSRMSFIQLLGKIPSQHCSQQTAEEMALLAYNRGLKLS 89

Query: 1131 SPGLSVLGVGFTGSLASTRPKQGDHRFYLSTRTSDRLWVSGVTLSKGLRTREQEDTVSSR 952
            SPG  V+GVGFTGSLAS+RPK GDHRFYLSTRTSDRL VS VTLSKGLRTREQEDTVSS 
Sbjct: 90   SPGYPVVGVGFTGSLASSRPKFGDHRFYLSTRTSDRLSVSTVTLSKGLRTREQEDTVSSH 149

Query: 951  FLLKAVGDACKVSSTFVSELTETEVPDEREKLFSEDEELQQLIDGEICMKVYPFSNESHV 772
             LLKA+ +ACKV +  VS LTE+++ DE E  FSED+EL+QLIDG+IC KVYPFS+E++ 
Sbjct: 150  LLLKAIANACKVQAASVSHLTESDMSDEHETHFSEDQELEQLIDGKICFKVYPFSSETYT 209

Query: 771  STSEKKIILSGSFNPLHDGHLRLLEVATSICDDGYPCFEISAINADKPPLTVSQIKERVK 592
             T+E+KIILSGSFNPLHDGH++LLEVATS C +GYPCFEISA+NADKPPL+VSQIK+R+K
Sbjct: 210  PTAERKIILSGSFNPLHDGHVKLLEVATSFCGNGYPCFEISAVNADKPPLSVSQIKDRIK 269

Query: 591  QFEKAGKTVIISSQPYFYKKAELFPGSAFVIGADTAARLINPKYYGGDHNKMLEILNGCQ 412
            QFEKAGKTVIIS+QPYFYKKAELFPGSAFVIGADT ARLINPKYY GDH KMLEIL+GC+
Sbjct: 270  QFEKAGKTVIISNQPYFYKKAELFPGSAFVIGADTVARLINPKYYDGDHGKMLEILDGCK 329

Query: 411  KLGCTFLVGGRNVDGIFKVLEDLEIPAELKDLFISIPEERFRVDVSSTELRKKLGM 244
            ++GCTFLVGGRNVDG+FKVLED +IP  LKD+F+SIP +RFR+D+SSTE+R   G+
Sbjct: 330  RIGCTFLVGGRNVDGVFKVLEDFDIPETLKDMFVSIPADRFRIDISSTEIRNSGGL 385


>ref|XP_002526281.1| conserved hypothetical protein [Ricinus communis]
            gi|223534362|gb|EEF36070.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 385

 Score =  545 bits (1404), Expect = e-152
 Identities = 263/356 (73%), Positives = 317/356 (89%)
 Frame = -2

Query: 1311 QSLGHLMSVPGASNTVLEAVVPYSRISMLQLLNKLPTQFASKQTAEDMALSAYNRALKLS 1132
            Q++G L+SVPGASNTVLE+VVPYSR+SM+QLL K+P+ F S QTAEDMAL AY+RALKLS
Sbjct: 30   QAIGWLVSVPGASNTVLESVVPYSRMSMIQLLGKIPSHFVSLQTAEDMALLAYSRALKLS 89

Query: 1131 SPGLSVLGVGFTGSLASTRPKQGDHRFYLSTRTSDRLWVSGVTLSKGLRTREQEDTVSSR 952
            +PG  VLGVGFTGSLASTRPK GDHRF+LSTRTSDRLW S VTLSKGLRTREQED +SS+
Sbjct: 90   TPGSPVLGVGFTGSLASTRPKLGDHRFHLSTRTSDRLWTSTVTLSKGLRTREQEDALSSQ 149

Query: 951  FLLKAVGDACKVSSTFVSELTETEVPDEREKLFSEDEELQQLIDGEICMKVYPFSNESHV 772
             LLKA+ +A KV +TFVS+LTE++  +E EK FSED+EL+QLI+G+IC KVYPFS+ SH 
Sbjct: 150  ILLKAIANASKVQATFVSDLTESDASNECEKQFSEDQELEQLINGQICFKVYPFSSVSHT 209

Query: 771  STSEKKIILSGSFNPLHDGHLRLLEVATSICDDGYPCFEISAINADKPPLTVSQIKERVK 592
            S+ E+KIILSGSFNPLH+GHL+L+EVA SIC +GYPCFE+SA+NADKPPL+VSQIK+RVK
Sbjct: 210  SSEERKIILSGSFNPLHEGHLKLMEVAASICGNGYPCFELSAVNADKPPLSVSQIKDRVK 269

Query: 591  QFEKAGKTVIISSQPYFYKKAELFPGSAFVIGADTAARLINPKYYGGDHNKMLEILNGCQ 412
            QFE+ GKTVI+S+QP+FYKKAELFPGSAFVIGADTAARLIN KYY GD+ KM+EIL GC+
Sbjct: 270  QFEEVGKTVIVSNQPFFYKKAELFPGSAFVIGADTAARLINTKYYDGDYGKMIEILMGCK 329

Query: 411  KLGCTFLVGGRNVDGIFKVLEDLEIPAELKDLFISIPEERFRVDVSSTELRKKLGM 244
            + GCTFLVGGRNVDG+FKVLED +IP  LKD+F+ IP E+FR+D+SST++R+  G+
Sbjct: 330  RTGCTFLVGGRNVDGVFKVLEDFDIPEVLKDMFVPIPPEKFRMDISSTDIRESRGL 385


>gb|ACJ84556.1| unknown [Medicago truncatula]
          Length = 382

 Score =  532 bits (1371), Expect = e-148
 Identities = 259/355 (72%), Positives = 309/355 (87%)
 Frame = -2

Query: 1311 QSLGHLMSVPGASNTVLEAVVPYSRISMLQLLNKLPTQFASKQTAEDMALSAYNRALKLS 1132
            Q LG L+SVPGASNTVLEAVVPYSR+S++QLL K+P  F S+QTA+DMAL AYNRALKLS
Sbjct: 30   QILGLLLSVPGASNTVLEAVVPYSRMSLIQLLAKIPLHFCSQQTADDMALLAYNRALKLS 89

Query: 1131 SPGLSVLGVGFTGSLASTRPKQGDHRFYLSTRTSDRLWVSGVTLSKGLRTREQEDTVSSR 952
            SPG  V+GVGFTGSLAS RPK G+HRFY+STRT+DRLW+S VTL+KGLRTRE+ED VSS 
Sbjct: 90   SPGSPVIGVGFTGSLASGRPKHGEHRFYMSTRTADRLWISKVTLTKGLRTREEEDRVSSH 149

Query: 951  FLLKAVGDACKVSSTFVSELTETEVPDEREKLFSEDEELQQLIDGEICMKVYPFSNESHV 772
             LLKA+ +ACKV S  + EL+E++V DE  K F+ED+EL+QLI+G+IC K+YPF +E   
Sbjct: 150  LLLKAIANACKVPSNDIPELSESDVSDECVKQFNEDQELEQLINGQICFKIYPFRSEI-- 207

Query: 771  STSEKKIILSGSFNPLHDGHLRLLEVATSICDDGYPCFEISAINADKPPLTVSQIKERVK 592
              +E+KIIL GSFNPLHDGH++L+EVAT IC DGYPCFE+SA+NADKPPL+VSQIK+RV 
Sbjct: 208  -PAERKIILPGSFNPLHDGHIKLMEVATRICGDGYPCFELSAVNADKPPLSVSQIKDRVN 266

Query: 591  QFEKAGKTVIISSQPYFYKKAELFPGSAFVIGADTAARLINPKYYGGDHNKMLEILNGCQ 412
            QFEK G+TVIIS+QPYFYKKAELFPGSAFVIGADTA RLINPKYY GD+NKML+IL GC+
Sbjct: 267  QFEKVGQTVIISNQPYFYKKAELFPGSAFVIGADTAVRLINPKYYDGDYNKMLKILGGCK 326

Query: 411  KLGCTFLVGGRNVDGIFKVLEDLEIPAELKDLFISIPEERFRVDVSSTELRKKLG 247
            + GCTFLV GRNVDG FKVL+DL +P E+KD+FISIP E+FR+D+SSTE+RKK G
Sbjct: 327  ETGCTFLVAGRNVDGAFKVLDDLNVPEEIKDMFISIPAEQFRMDISSTEIRKKSG 381


Top