BLASTX nr result

ID: Coptis25_contig00004905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004905
         (850 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272164.1| PREDICTED: uncharacterized protein LOC100258...   170   3e-40
ref|XP_002313486.1| predicted protein [Populus trichocarpa] gi|2...   157   3e-36
ref|XP_002298275.1| predicted protein [Populus trichocarpa] gi|2...   150   3e-34
ref|XP_002523872.1| conserved hypothetical protein [Ricinus comm...   146   5e-33
ref|XP_003543419.1| PREDICTED: uncharacterized protein LOC100780...   142   1e-31

>ref|XP_002272164.1| PREDICTED: uncharacterized protein LOC100258714 [Vitis vinifera]
          Length = 239

 Score =  170 bits (431), Expect = 3e-40
 Identities = 86/198 (43%), Positives = 123/198 (62%)
 Frame = +2

Query: 233 PAYTTQRAALFRRVLIIFVSICIIFGALSLILWLVLRPHIPEFQINSATVSPFNVSTSSS 412
           P Y++ RA   RR L   ++  II G +  I+WLVLRP +P F + SA++S FNVS  +S
Sbjct: 47  PPYSSPRATFLRRFLAAMIAFFIIVGTIIFIVWLVLRPRLPYFSVASASLSSFNVS--AS 104

Query: 413 QVSGNWDIEFIAKNPNKKLNVYYDTIQGGVFYGRELLSETTLAPFYQGTLNETKFGAKFA 592
           Q+SG W+I F  +NPNKK+++ YD I+  + Y    LS+TT+APFYQGT NET   A FA
Sbjct: 105 QLSGEWNISFDVRNPNKKISISYDRIESSIAYKSATLSQTTIAPFYQGTKNETTVTATFA 164

Query: 593 SSDAYVGDFFSKKMDRERKSGTVNFNVRLKGLVKFRSSTWRTRVHLLSVLCEGVSIGFTS 772
           +  AYV       ++ ER  G+V+F V++   V F+S  W+ R   LS  C  +++G  S
Sbjct: 165 AIGAYVDVL---AINAERTRGSVSFTVKVFARVSFKSGVWKARSRFLSAQCNDIALGLPS 221

Query: 773 NSGLGTLAGGPKKCDVKL 826
           N+  G+L GG ++C V L
Sbjct: 222 NASRGSLVGGSRECRVGL 239


>ref|XP_002313486.1| predicted protein [Populus trichocarpa] gi|222849894|gb|EEE87441.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  157 bits (397), Expect = 3e-36
 Identities = 74/194 (38%), Positives = 117/194 (60%)
 Frame = +2

Query: 239 YTTQRAALFRRVLIIFVSICIIFGALSLILWLVLRPHIPEFQINSATVSPFNVSTSSSQV 418
           Y  QRA L RR++   + + +IF  +  I+WLV+RPH+PEF++ S +VS FN S+SSS V
Sbjct: 52  YPNQRATLLRRLIAALIIVTVIFFTILFIVWLVIRPHLPEFRVTSLSVSSFNASSSSSSV 111

Query: 419 SGNWDIEFIAKNPNKKLNVYYDTIQGGVFYGRELLSETTLAPFYQGTLNETKFGAKFASS 598
           SGNW+  F   NPN KL + Y  IQ  ++Y  E LS+T + PF Q   N T   A++ + 
Sbjct: 112 SGNWNARFQVYNPN-KLKISYGDIQSSIYYKSEFLSQTRIPPFKQAKKNVTDINAEYGAM 170

Query: 599 DAYVGDFFSKKMDRERKSGTVNFNVRLKGLVKFRSSTWRTRVHLLSVLCEGVSIGFTSNS 778
            +Y+      +++ ++  G+V+FN+++     +R   +R R  LL V C+ +++G + N 
Sbjct: 171 GSYIAGRAVNQINGDKGRGSVSFNLKIVADAVYRVGGFRARRRLLRVFCDDLAVGISGNG 230

Query: 779 GLGTLAGGPKKCDV 820
           G G L GG ++C V
Sbjct: 231 GSGNLTGGARRCKV 244


>ref|XP_002298275.1| predicted protein [Populus trichocarpa] gi|222845533|gb|EEE83080.1|
           predicted protein [Populus trichocarpa]
          Length = 248

 Score =  150 bits (380), Expect = 3e-34
 Identities = 73/194 (37%), Positives = 111/194 (57%)
 Frame = +2

Query: 239 YTTQRAALFRRVLIIFVSICIIFGALSLILWLVLRPHIPEFQINSATVSPFNVSTSSSQV 418
           Y  QRA   RR++I  +    IF  +  I WLV+RPH PEF++ S ++S FNVS+SSS V
Sbjct: 53  YPNQRAIFLRRLIIALIIFTGIFFTILFICWLVIRPHFPEFRVTSLSISNFNVSSSSSSV 112

Query: 419 SGNWDIEFIAKNPNKKLNVYYDTIQGGVFYGRELLSETTLAPFYQGTLNETKFGAKFASS 598
           +G W+  F   NPNKK+ + Y+ IQ  +FY  E LS+T + PF QG  N T    ++ ++
Sbjct: 113 TGTWNARFQVSNPNKKMKISYNEIQTSIFYKSEFLSQTRIPPFRQGKRNVTDIDVEYGAT 172

Query: 599 DAYVGDFFSKKMDRERKSGTVNFNVRLKGLVKFRSSTWRTRVHLLSVLCEGVSIGFTSNS 778
            +Y+G+    +++ +     V+FN+R+     F+   +  R  LL V C  V++G + N 
Sbjct: 173 SSYIGERTVNQINSDEGRRLVSFNLRIVADAGFKVEGFWARRRLLRVYCNDVAVGTSGNG 232

Query: 779 GLGTLAGGPKKCDV 820
             G L GG  +C V
Sbjct: 233 RSGNLTGGAVRCSV 246


>ref|XP_002523872.1| conserved hypothetical protein [Ricinus communis]
           gi|223536960|gb|EEF38598.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 239

 Score =  146 bits (369), Expect = 5e-33
 Identities = 81/199 (40%), Positives = 112/199 (56%), Gaps = 1/199 (0%)
 Frame = +2

Query: 227 PHPAYTTQRAALFRRVLIIFVSICIIFGALSLILWLVLRPHIPEFQINSATVSPFNVSTS 406
           P P Y   R  L RR++   +   ++F  + LI WLV+RPH P+F I S ++S FN+S S
Sbjct: 44  PTPLY---RTTLLRRIIAAIIVATVLFFTIFLICWLVIRPHRPQFHITSFSISNFNISAS 100

Query: 407 SSQVSGNWDIEFIAKNPNKKLNVYYDTIQGGVFYGRELLSETTLAPFYQGTLNETKFGAK 586
           S +++ NW+  F   NPNKKL + YD I   +    ELLS+T + P YQ T N T   A 
Sbjct: 101 SQRLTANWNARFQVYNPNKKLKISYDNIVCSLLLKSELLSQTRIPPLYQDTKNLTSLDAS 160

Query: 587 FASSDAYVGDFFSKKMDRERKSGTVNFNVRLKGLVKFRSSTWRTRVHLLSVLCEGVSIGF 766
           F++ D YV D   K ++  R   T+ FNVRL   V F+   +R R  LL V C+ V +  
Sbjct: 161 FSALDTYVDDRVLKDINAARP--TLAFNVRLMADVGFKVGGFRARHRLLRVWCDNVPLSL 218

Query: 767 TS-NSGLGTLAGGPKKCDV 820
           +S  SG G L GG ++C V
Sbjct: 219 SSATSGSGNLTGGSRECKV 237


>ref|XP_003543419.1| PREDICTED: uncharacterized protein LOC100780672 [Glycine max]
          Length = 271

 Score =  142 bits (358), Expect = 1e-31
 Identities = 66/188 (35%), Positives = 110/188 (58%)
 Frame = +2

Query: 257 ALFRRVLIIFVSICIIFGALSLILWLVLRPHIPEFQINSATVSPFNVSTSSSQVSGNWDI 436
           + FR      + + ++FG + +I WLVLRP +P F ++S +VS  N+S++S  +S  W +
Sbjct: 84  SFFRAFFATMICLAVVFGVVLIITWLVLRPSLPHFTLHSLSVS--NLSSTSQSLSATWHL 141

Query: 437 EFIAKNPNKKLNVYYDTIQGGVFYGRELLSETTLAPFYQGTLNETKFGAKFASSDAYVGD 616
            F+ +N NKK+ V Y+ ++  +FY +  +SE+ LAPF Q T ++T   A   ++  Y+  
Sbjct: 142 SFLVRNGNKKMTVSYNALRSSIFYRQNYISESQLAPFRQDTRSQTTLNATLTAAGTYLEP 201

Query: 617 FFSKKMDRERKSGTVNFNVRLKGLVKFRSSTWRTRVHLLSVLCEGVSIGFTSNSGLGTLA 796
                ++ ER + +V F+V++     FRS +WR R  +L VLC  V +G +S S  G L 
Sbjct: 202 KLIDNLNAERNASSVLFDVQVVAATSFRSGSWRFRTRVLKVLCRKVPVGVSSKSSSGDLV 261

Query: 797 GGPKKCDV 820
           GG ++C V
Sbjct: 262 GGDRECQV 269


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