BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004874
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264869.2| PREDICTED: 50S ribosomal protein L19, chloro...   156   4e-36
emb|CAN82787.1| hypothetical protein VITISV_037813 [Vitis vinifera]   153   3e-35
ref|XP_004147231.1| PREDICTED: 50S ribosomal protein L19, chloro...   145   8e-33
ref|NP_001236421.1| uncharacterized protein LOC100500328 [Glycin...   142   4e-32
gb|ACU14853.1| unknown [Glycine max]                                  142   4e-32

>ref|XP_002264869.2| PREDICTED: 50S ribosomal protein L19, chloroplastic [Vitis
           vinifera] gi|296088907|emb|CBI38456.3| unnamed protein
           product [Vitis vinifera]
          Length = 231

 Score =  156 bits (394), Expect = 4e-36
 Identities = 101/198 (51%), Positives = 115/198 (58%), Gaps = 23/198 (11%)
 Frame = +2

Query: 122 MASSLLPQALFSNPRTTH-----------FPS-HISSLKPSSITLSNVSSTRVRSKIVPI 265
           MAS +LPQALF  PR+++           FPS   SSL  + ++ S  SS        PI
Sbjct: 1   MASKVLPQALFITPRSSNQWPPKKLGLSTFPSPRSSSLNLNRLSTSRFSSNSFAFHFRPI 60

Query: 266 VTRQNKRRSVLVRAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------KLG 412
           V   + +R  +VRAE                                          KLG
Sbjct: 61  VV--SPKRFFIVRAEADNEGELGADENTEEEETVSETESEVKLDAEDEAKPPRKPRVKLG 118

Query: 413 DIMGILNKRAIEASDKERPTPDLRTGDIVQIKLEVPANRRRQSIYKGIVISKQNAGIHTT 592
           DIMGILNKRAIEAS+KERP PDLRTGDIV+IKLEVP NRRR SIYKGIVISKQNAGIHTT
Sbjct: 119 DIMGILNKRAIEASEKERPVPDLRTGDIVEIKLEVPENRRRLSIYKGIVISKQNAGIHTT 178

Query: 593 IRIRNIIAGIGVEIVFPV 646
           IR+R IIAG+GVEIVFPV
Sbjct: 179 IRVRRIIAGVGVEIVFPV 196


>emb|CAN82787.1| hypothetical protein VITISV_037813 [Vitis vinifera]
          Length = 231

 Score =  153 bits (386), Expect = 3e-35
 Identities = 99/196 (50%), Positives = 111/196 (56%), Gaps = 21/196 (10%)
 Frame = +2

Query: 122 MASSLLPQALFSNPRTTH-----------FPSHIS-SLKPSSITLSNVSSTRVRSKIVPI 265
           MAS +LPQALF  PR+++           FPS  S SL  + ++ S  SS        PI
Sbjct: 1   MASKVLPQALFITPRSSNQXPPKKLGLSTFPSPRSXSLNLNRLSTSRFSSNSFXFHFRPI 60

Query: 266 VTRQNKRRSVLVRA---------EGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLGDI 418
           V    +   V   A         E                               KLGDI
Sbjct: 61  VVSPKRFFIVXAEADNEGELGPDENTEEEETVSETESEVKLDAEDEAKPPRKPRVKLGDI 120

Query: 419 MGILNKRAIEASDKERPTPDLRTGDIVQIKLEVPANRRRQSIYKGIVISKQNAGIHTTIR 598
           MGILNKRAIEAS+KERP PDLRTGDIV+IKLEVP NRRR SIYKGIVISKQNAGIHTTIR
Sbjct: 121 MGILNKRAIEASEKERPVPDLRTGDIVEIKLEVPENRRRLSIYKGIVISKQNAGIHTTIR 180

Query: 599 IRNIIAGIGVEIVFPV 646
           +R IIAG+GVEIVFPV
Sbjct: 181 VRRIIAGVGVEIVFPV 196


>ref|XP_004147231.1| PREDICTED: 50S ribosomal protein L19, chloroplastic-like [Cucumis
           sativus] gi|449523724|ref|XP_004168873.1| PREDICTED: 50S
           ribosomal protein L19, chloroplastic-like [Cucumis
           sativus]
          Length = 221

 Score =  145 bits (365), Expect = 8e-33
 Identities = 90/187 (48%), Positives = 113/187 (60%), Gaps = 12/187 (6%)
 Frame = +2

Query: 122 MASSLLPQALFSNPRTTH--FPSHI---SSLKPSSITLSNVSSTRVRSKIVPIVTRQNKR 286
           MAS +LPQA+ S PR  +   P  +   S++  + ++ S +SS+ + S     V     R
Sbjct: 1   MASKILPQAVISIPRNPNQCAPRRLGFCSAVSGTRVSFSTLSSSSIGSHFHHTVAAP-LR 59

Query: 287 RSVLVRAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------KLGDIMGILNKRAI 445
           R+ +VRAE                                      KLGD+MGILNKRAI
Sbjct: 60  RAFVVRAEANPEADSAAEEAPEAEVEAAVESDAQPEEEKPSRKPRVKLGDVMGILNKRAI 119

Query: 446 EASDKERPTPDLRTGDIVQIKLEVPANRRRQSIYKGIVISKQNAGIHTTIRIRNIIAGIG 625
           EAS+KERP PD+RTGDIV++KLEV  NRRR S+Y+GIVISKQNAGIHTTIRIR IIAG+G
Sbjct: 120 EASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVG 179

Query: 626 VEIVFPV 646
           VEIVFP+
Sbjct: 180 VEIVFPL 186


>ref|NP_001236421.1| uncharacterized protein LOC100500328 [Glycine max]
           gi|255630036|gb|ACU15370.1| unknown [Glycine max]
          Length = 213

 Score =  142 bits (359), Expect = 4e-32
 Identities = 71/81 (87%), Positives = 77/81 (95%)
 Frame = +2

Query: 404 KLGDIMGILNKRAIEASDKERPTPDLRTGDIVQIKLEVPANRRRQSIYKGIVISKQNAGI 583
           KLGDIMGILN+RAIEAS+K+RPTPD+RTGDIV+IKLEVP N+RR SIYKGIVISKQNAGI
Sbjct: 98  KLGDIMGILNQRAIEASEKQRPTPDIRTGDIVEIKLEVPENKRRLSIYKGIVISKQNAGI 157

Query: 584 HTTIRIRNIIAGIGVEIVFPV 646
           HTTIRIR IIAG GVEIVFPV
Sbjct: 158 HTTIRIRRIIAGTGVEIVFPV 178


>gb|ACU14853.1| unknown [Glycine max]
          Length = 212

 Score =  142 bits (359), Expect = 4e-32
 Identities = 71/81 (87%), Positives = 77/81 (95%)
 Frame = +2

Query: 404 KLGDIMGILNKRAIEASDKERPTPDLRTGDIVQIKLEVPANRRRQSIYKGIVISKQNAGI 583
           KLGDIMGILN+RAIEAS+K+RPTPD+RTGDIV+IKLEVP N+RR SIYKGIVISKQNAGI
Sbjct: 97  KLGDIMGILNQRAIEASEKQRPTPDIRTGDIVEIKLEVPENKRRLSIYKGIVISKQNAGI 156

Query: 584 HTTIRIRNIIAGIGVEIVFPV 646
           HTTIRIR IIAG GVEIVFPV
Sbjct: 157 HTTIRIRRIIAGTGVEIVFPV 177