BLASTX nr result

ID: Coptis25_contig00004845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004845
         (1550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322732.1| predicted protein [Populus trichocarpa] gi|2...   217   8e-54
ref|XP_002275794.1| PREDICTED: thioredoxin-like 3-1, chloroplast...   214   6e-53
ref|XP_003625285.1| Thioredoxin-like protein [Medicago truncatul...   213   1e-52
ref|XP_003554219.1| PREDICTED: thioredoxin-like 3-1, chloroplast...   209   2e-51
ref|NP_001239801.1| uncharacterized protein LOC100783648 [Glycin...   208   3e-51

>ref|XP_002322732.1| predicted protein [Populus trichocarpa] gi|222867362|gb|EEF04493.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score =  217 bits (552), Expect = 8e-54
 Identities = 102/134 (76%), Positives = 114/134 (85%)
 Frame = +3

Query: 84  SNRSVKAQAFWQGTAKPTTLEMEAITSVEHLDQILIEAQEQSQPVIIDWMAAWCRKCIYL 263
           S R +K  A W G  +PT++EME I    HLD+IL++A E SQP+IIDWMA+WCRKCIYL
Sbjct: 61  SKRDLKVAASWPGMTRPTSVEMEPIDDSHHLDKILLQAHELSQPIIIDWMASWCRKCIYL 120

Query: 264 KPKLEKLAAEYDTKIKFYYVDVNNVSQLLVKRGNISKMPTIQLWKDGEMKEEVIGGHKAW 443
           KPKLEKLAAEYDTKIKFY VDVN V Q LVKRGNISKMPTIQLWKDGEMK EVIGGHKAW
Sbjct: 121 KPKLEKLAAEYDTKIKFYCVDVNKVPQALVKRGNISKMPTIQLWKDGEMKAEVIGGHKAW 180

Query: 444 LVVDEVREMIQKFI 485
           LV++EVREMIQKF+
Sbjct: 181 LVMEEVREMIQKFV 194


>ref|XP_002275794.1| PREDICTED: thioredoxin-like 3-1, chloroplastic isoform 1 [Vitis
           vinifera]
          Length = 185

 Score =  214 bits (544), Expect = 6e-53
 Identities = 99/132 (75%), Positives = 111/132 (84%)
 Frame = +3

Query: 90  RSVKAQAFWQGTAKPTTLEMEAITSVEHLDQILIEAQEQSQPVIIDWMAAWCRKCIYLKP 269
           R  + +AFW    +P  +EM+ I   + LDQIL  AQE  QP+IIDWMAAWCRKCIYLKP
Sbjct: 54  RDFRVEAFWPDMTRPNVIEMQPIKDCDQLDQILARAQELPQPIIIDWMAAWCRKCIYLKP 113

Query: 270 KLEKLAAEYDTKIKFYYVDVNNVSQLLVKRGNISKMPTIQLWKDGEMKEEVIGGHKAWLV 449
           KLEKLAAEYDTKIKFY VDVNNVSQ LVKRGNI+KMPTIQLWKDGEMK EVIGGHKAW+V
Sbjct: 114 KLEKLAAEYDTKIKFYSVDVNNVSQALVKRGNITKMPTIQLWKDGEMKAEVIGGHKAWIV 173

Query: 450 VDEVREMIQKFI 485
           +DEVREMI+KF+
Sbjct: 174 IDEVREMIKKFV 185


>ref|XP_003625285.1| Thioredoxin-like protein [Medicago truncatula]
           gi|355500300|gb|AES81503.1| Thioredoxin-like protein
           [Medicago truncatula]
          Length = 187

 Score =  213 bits (542), Expect = 1e-52
 Identities = 96/139 (69%), Positives = 117/139 (84%)
 Frame = +3

Query: 69  KEPRFSNRSVKAQAFWQGTAKPTTLEMEAITSVEHLDQILIEAQEQSQPVIIDWMAAWCR 248
           K+ +   ++++ +A W   ++P+++EMEAI   E LDQIL+ AQ+ S+P++IDWMAAWCR
Sbjct: 49  KQKKIRRKNLRVEAMWPDLSRPSSVEMEAIHDSEQLDQILVHAQQNSEPILIDWMAAWCR 108

Query: 249 KCIYLKPKLEKLAAEYDTKIKFYYVDVNNVSQLLVKRGNISKMPTIQLWKDGEMKEEVIG 428
           KCIYLKPKLEKLAAE+DTK KFYYVDVN V Q LVKRG ISKMPTIQLWKDGEMKEEVIG
Sbjct: 109 KCIYLKPKLEKLAAEFDTKAKFYYVDVNKVPQTLVKRGKISKMPTIQLWKDGEMKEEVIG 168

Query: 429 GHKAWLVVDEVREMIQKFI 485
           GHK WLV++EVREMIQ +I
Sbjct: 169 GHKGWLVIEEVREMIQNYI 187


>ref|XP_003554219.1| PREDICTED: thioredoxin-like 3-1, chloroplastic-like isoform 2
           [Glycine max]
          Length = 188

 Score =  209 bits (532), Expect = 2e-51
 Identities = 95/141 (67%), Positives = 114/141 (80%)
 Frame = +3

Query: 63  KRKEPRFSNRSVKAQAFWQGTAKPTTLEMEAITSVEHLDQILIEAQEQSQPVIIDWMAAW 242
           ++ E +   R+++ +A W   ++P  LEME I+  E LDQIL+ AQ+ SQP++IDWMA W
Sbjct: 48  RKSEGKIKRRNLRVEAMWPDLSRPNELEMEEISDSEQLDQILVHAQQNSQPILIDWMATW 107

Query: 243 CRKCIYLKPKLEKLAAEYDTKIKFYYVDVNNVSQLLVKRGNISKMPTIQLWKDGEMKEEV 422
           CRKCIYLKPKLEKLA EY  K KFY+VDVN V Q LVKRGNISKMPTIQLWKDGEMK EV
Sbjct: 108 CRKCIYLKPKLEKLAPEYHNKAKFYFVDVNKVPQTLVKRGNISKMPTIQLWKDGEMKAEV 167

Query: 423 IGGHKAWLVVDEVREMIQKFI 485
           IGGHKAWLV++EVREMIQK++
Sbjct: 168 IGGHKAWLVMEEVREMIQKYL 188


>ref|NP_001239801.1| uncharacterized protein LOC100783648 [Glycine max]
           gi|255640849|gb|ACU20707.1| unknown [Glycine max]
          Length = 189

 Score =  208 bits (530), Expect = 3e-51
 Identities = 94/132 (71%), Positives = 111/132 (84%)
 Frame = +3

Query: 90  RSVKAQAFWQGTAKPTTLEMEAITSVEHLDQILIEAQEQSQPVIIDWMAAWCRKCIYLKP 269
           R+ + +A W   ++P+ LEME I   E LDQIL+ AQ+ SQP++IDWMA WCRKCIYLKP
Sbjct: 58  RNFRVEAMWPDLSRPSELEMEEINDSEQLDQILVHAQQNSQPILIDWMATWCRKCIYLKP 117

Query: 270 KLEKLAAEYDTKIKFYYVDVNNVSQLLVKRGNISKMPTIQLWKDGEMKEEVIGGHKAWLV 449
           KLEKLA EY  K+KFY+VDVN V Q LVKRGNISKMPTIQLWKDGEMKEEVIGGHKAWLV
Sbjct: 118 KLEKLAPEYQDKVKFYFVDVNKVPQTLVKRGNISKMPTIQLWKDGEMKEEVIGGHKAWLV 177

Query: 450 VDEVREMIQKFI 485
           ++EV+EMIQK++
Sbjct: 178 IEEVKEMIQKYL 189


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