BLASTX nr result

ID: Coptis25_contig00004831 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004831
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527329.1| ATP-binding cassette transporter, putative [...   340   8e-92
ref|XP_002528564.1| ATP-binding cassette transporter, putative [...   340   1e-91
ref|XP_003526427.1| PREDICTED: pleiotropic drug resistance prote...   338   5e-91
ref|XP_003543663.1| PREDICTED: pleiotropic drug resistance prote...   337   7e-91
emb|CBI20978.3| unnamed protein product [Vitis vinifera]              337   7e-91

>ref|XP_002527329.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223533329|gb|EEF35081.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 1434

 Score =  340 bits (873), Expect = 8e-92
 Identities = 169/192 (88%), Positives = 185/192 (96%)
 Frame = -3

Query: 577 DVSGVIKPSRMTLLLGPPSSGKTTFLLALAGKLDSDLKVSGRVTYNGHAMDEFVPQRTSA 398
           DV+GVIKP RMTLLLGPPSSGKTT LLALAGKLD +LK SG VTYNGHAM+EF+PQRT+A
Sbjct: 170 DVNGVIKPRRMTLLLGPPSSGKTTLLLALAGKLDPNLKFSGNVTYNGHAMNEFIPQRTAA 229

Query: 397 YISQYDLHIGEMTVRETLAFSARCQGVGTGYEMLAELSRREKAANIKPDPNIDVYMKAAA 218
           YISQ+DLHIGEMTV+ETLAFSARCQGVGT +EMLAELSRREKAANIKPDP+IDV+MKAAA
Sbjct: 230 YISQHDLHIGEMTVKETLAFSARCQGVGTQHEMLAELSRREKAANIKPDPDIDVFMKAAA 289

Query: 217 TEGQEASVVTDYILKILGLDVCADTLVGNDMLRGISGGQRKRVTTGEMLVGPAKALFMDE 38
           TEGQE SVVTDY+LKILGL+VCADTLVGN+M+RGISGGQ+KRVTTGEMLVGPAKALFMDE
Sbjct: 290 TEGQETSVVTDYVLKILGLEVCADTLVGNEMIRGISGGQKKRVTTGEMLVGPAKALFMDE 349

Query: 37  ISTGLDSSTTFQ 2
           ISTGLDSSTT+Q
Sbjct: 350 ISTGLDSSTTYQ 361


>ref|XP_002528564.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223532008|gb|EEF33819.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 1423

 Score =  340 bits (871), Expect = 1e-91
 Identities = 169/192 (88%), Positives = 184/192 (95%)
 Frame = -3

Query: 577 DVSGVIKPSRMTLLLGPPSSGKTTFLLALAGKLDSDLKVSGRVTYNGHAMDEFVPQRTSA 398
           +VSG+IKPSRMTLLLGPPSSGKTT LLALAGKLD  LKVSGRVTYNGH M+EFVPQR++A
Sbjct: 169 NVSGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPTLKVSGRVTYNGHGMNEFVPQRSAA 228

Query: 397 YISQYDLHIGEMTVRETLAFSARCQGVGTGYEMLAELSRREKAANIKPDPNIDVYMKAAA 218
           YISQYDLHIGEMTVRETLAFSARC+GVGT Y+MLAELSRREKA NIKPDP+IDV+MKAAA
Sbjct: 229 YISQYDLHIGEMTVRETLAFSARCEGVGTRYDMLAELSRREKAMNIKPDPDIDVFMKAAA 288

Query: 217 TEGQEASVVTDYILKILGLDVCADTLVGNDMLRGISGGQRKRVTTGEMLVGPAKALFMDE 38
            EG+E SVVTDYILK+LGL+VCADT+VG+DMLRGISGGQRKRVTTGEMLVGPAKALFMDE
Sbjct: 289 IEGEETSVVTDYILKVLGLEVCADTMVGDDMLRGISGGQRKRVTTGEMLVGPAKALFMDE 348

Query: 37  ISTGLDSSTTFQ 2
           ISTGLDSSTT+Q
Sbjct: 349 ISTGLDSSTTYQ 360



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 54/186 (29%), Positives = 86/186 (46%)
 Frame = -3

Query: 574  VSGVIKPSRMTLLLGPPSSGKTTFLLALAGKLDSDLKVSGRVTYNGHAMDEFVPQRTSAY 395
            VSG  +P  +T L+G   +GKTT +  LAG+      + G +T +G+   +    R S Y
Sbjct: 857  VSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-HIEGNITVSGYPKKQETFARISGY 915

Query: 394  ISQYDLHIGEMTVRETLAFSARCQGVGTGYEMLAELSRREKAANIKPDPNIDVYMKAAAT 215
              Q D+H   +TV E+L FSA          + +E+  R +                   
Sbjct: 916  CEQNDIHSPHVTVYESLVFSA-------WLRLPSEVDERTR------------------- 949

Query: 214  EGQEASVVTDYILKILGLDVCADTLVGNDMLRGISGGQRKRVTTGEMLVGPAKALFMDEI 35
                  + T+ ++++L L+     LVG   + G+S  QRKR+T    LV     +FMDE 
Sbjct: 950  -----KMFTEEVIELLELNPLRRELVGLPGINGLSTEQRKRLTIAVELVANPSIIFMDEP 1004

Query: 34   STGLDS 17
            ++GLD+
Sbjct: 1005 TSGLDA 1010


>ref|XP_003526427.1| PREDICTED: pleiotropic drug resistance protein 1-like [Glycine max]
          Length = 1448

 Score =  338 bits (866), Expect = 5e-91
 Identities = 166/192 (86%), Positives = 182/192 (94%)
 Frame = -3

Query: 577 DVSGVIKPSRMTLLLGPPSSGKTTFLLALAGKLDSDLKVSGRVTYNGHAMDEFVPQRTSA 398
           DVSG+IKP RMTLLLGPPSSGKTT LLALAG+L  DLK SGRV+YNGH M+EFVPQRTSA
Sbjct: 168 DVSGIIKPKRMTLLLGPPSSGKTTLLLALAGRLSKDLKFSGRVSYNGHGMEEFVPQRTSA 227

Query: 397 YISQYDLHIGEMTVRETLAFSARCQGVGTGYEMLAELSRREKAANIKPDPNIDVYMKAAA 218
           YISQ DLHIGEMTVRETLAFSARCQG+GT YEMLAELSRREKAANIKPDP++D+YMKAAA
Sbjct: 228 YISQTDLHIGEMTVRETLAFSARCQGIGTRYEMLAELSRREKAANIKPDPDLDIYMKAAA 287

Query: 217 TEGQEASVVTDYILKILGLDVCADTLVGNDMLRGISGGQRKRVTTGEMLVGPAKALFMDE 38
            EGQE +VVTDYI+KILGL+VCADT+VG+DM+RGISGGQ+KRVTTGEMLVGPA+ALFMDE
Sbjct: 288 LEGQETNVVTDYIMKILGLEVCADTMVGDDMIRGISGGQKKRVTTGEMLVGPARALFMDE 347

Query: 37  ISTGLDSSTTFQ 2
           ISTGLDSSTTFQ
Sbjct: 348 ISTGLDSSTTFQ 359



 Score = 68.6 bits (166), Expect = 7e-10
 Identities = 48/186 (25%), Positives = 86/186 (46%)
 Frame = -3

Query: 574  VSGVIKPSRMTLLLGPPSSGKTTFLLALAGKLDSDLKVSGRVTYNGHAMDEFVPQRTSAY 395
            V+G  +P  +T L+G   +GKTT +  L+G+  +   + G++T +G+   +    R + Y
Sbjct: 882  VNGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTAGY-IQGQITISGYPKRQETFARIAGY 940

Query: 394  ISQYDLHIGEMTVRETLAFSARCQGVGTGYEMLAELSRREKAANIKPDPNIDVYMKAAAT 215
              Q D+H   +TV E+L +SA                       ++  P +D        
Sbjct: 941  CEQTDIHSPHVTVYESLVYSAW----------------------LRLPPEVD-------- 970

Query: 214  EGQEASVVTDYILKILGLDVCADTLVGNDMLRGISGGQRKRVTTGEMLVGPAKALFMDEI 35
                  +  + +++++ L    + LVG   + G+S  QRKR+T    LV     +FMDE 
Sbjct: 971  -SSTRQMFIEEVMELVELTSLREALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 1029

Query: 34   STGLDS 17
            ++GLD+
Sbjct: 1030 TSGLDA 1035


>ref|XP_003543663.1| PREDICTED: pleiotropic drug resistance protein 1-like [Glycine max]
          Length = 1426

 Score =  337 bits (865), Expect = 7e-91
 Identities = 166/192 (86%), Positives = 183/192 (95%)
 Frame = -3

Query: 577 DVSGVIKPSRMTLLLGPPSSGKTTFLLALAGKLDSDLKVSGRVTYNGHAMDEFVPQRTSA 398
           DVSG+IKP RMTLLLGPPSSGKTT LLAL+GKLD  LKVSGRVTYNGH ++EFVPQRT+A
Sbjct: 169 DVSGIIKPRRMTLLLGPPSSGKTTLLLALSGKLDKTLKVSGRVTYNGHELNEFVPQRTAA 228

Query: 397 YISQYDLHIGEMTVRETLAFSARCQGVGTGYEMLAELSRREKAANIKPDPNIDVYMKAAA 218
           YISQ+DLHIGEMTVRETLAFSARCQGVG+ Y+ML+ELSRREKAANIKPDP++DVYMKA A
Sbjct: 229 YISQHDLHIGEMTVRETLAFSARCQGVGSRYDMLSELSRREKAANIKPDPDLDVYMKATA 288

Query: 217 TEGQEASVVTDYILKILGLDVCADTLVGNDMLRGISGGQRKRVTTGEMLVGPAKALFMDE 38
           TEGQE+S+VTDY LKILGLD+CADT+VG++MLRGISGGQRKRVTTGEMLVGPA ALFMDE
Sbjct: 289 TEGQESSIVTDYTLKILGLDICADTMVGDEMLRGISGGQRKRVTTGEMLVGPANALFMDE 348

Query: 37  ISTGLDSSTTFQ 2
           ISTGLDSSTTFQ
Sbjct: 349 ISTGLDSSTTFQ 360


>emb|CBI20978.3| unnamed protein product [Vitis vinifera]
          Length = 1436

 Score =  337 bits (865), Expect = 7e-91
 Identities = 165/192 (85%), Positives = 183/192 (95%)
 Frame = -3

Query: 577 DVSGVIKPSRMTLLLGPPSSGKTTFLLALAGKLDSDLKVSGRVTYNGHAMDEFVPQRTSA 398
           DVSG+IKP RMTLLLGPPSSGKTT LL LAGKL SDLK+SGRV+YNGH MDEFVPQR+SA
Sbjct: 169 DVSGIIKPGRMTLLLGPPSSGKTTLLLTLAGKLGSDLKLSGRVSYNGHGMDEFVPQRSSA 228

Query: 397 YISQYDLHIGEMTVRETLAFSARCQGVGTGYEMLAELSRREKAANIKPDPNIDVYMKAAA 218
           YISQYDLHIGEMTVRETLAFSARCQGVGTGY+MLAELSRREK ANIKPDP+ID+YMKAAA
Sbjct: 229 YISQYDLHIGEMTVRETLAFSARCQGVGTGYDMLAELSRREKVANIKPDPDIDIYMKAAA 288

Query: 217 TEGQEASVVTDYILKILGLDVCADTLVGNDMLRGISGGQRKRVTTGEMLVGPAKALFMDE 38
            +GQ  S++TDYILKILGL+VCADT+VG++M+RGISGGQ++R+TTGEMLVGPAKALFMDE
Sbjct: 289 LKGQGGSLITDYILKILGLEVCADTIVGDEMVRGISGGQKRRLTTGEMLVGPAKALFMDE 348

Query: 37  ISTGLDSSTTFQ 2
           ISTGLDSSTTFQ
Sbjct: 349 ISTGLDSSTTFQ 360



 Score = 68.6 bits (166), Expect = 7e-10
 Identities = 52/186 (27%), Positives = 87/186 (46%)
 Frame = -3

Query: 574  VSGVIKPSRMTLLLGPPSSGKTTFLLALAGKLDSDLKVSGRVTYNGHAMDEFVPQRTSAY 395
            VSG  +P  +T L+G   +GKTT +  LAG+      + G +  +G+  ++    R S Y
Sbjct: 870  VSGSFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY-IDGSIKISGYPKNQKTFARISGY 928

Query: 394  ISQYDLHIGEMTVRETLAFSARCQGVGTGYEMLAELSRREKAANIKPDPNIDVYMKAAAT 215
              Q D+H   +TV E+L +SA                       ++  P +D     +AT
Sbjct: 929  CEQTDIHSPHVTVYESLLYSAW----------------------LRLPPEVD-----SAT 961

Query: 214  EGQEASVVTDYILKILGLDVCADTLVGNDMLRGISGGQRKRVTTGEMLVGPAKALFMDEI 35
                  +  + +++++ L+     LVG   + G+S  QRKR+T    LV     +FMDE 
Sbjct: 962  R----KMFIEEVMELVELNSLRQALVGLPGVDGLSTEQRKRLTVAVELVANPSIIFMDEP 1017

Query: 34   STGLDS 17
            ++GLD+
Sbjct: 1018 TSGLDA 1023


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