BLASTX nr result

ID: Coptis25_contig00004802 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004802
         (2304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66049.1| hypothetical protein [Beta vulgaris subsp. vulga...    71   1e-09
emb|CCA66039.1| hypothetical protein [Beta vulgaris subsp. vulga...    70   2e-09
gb|AAQ19327.1| bZIP-like protein [Oryza sativa Japonica Group]         70   2e-09
emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]    69   4e-09
gb|EEE65704.1| hypothetical protein OsJ_21338 [Oryza sativa Japo...    69   6e-09

>emb|CCA66049.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 465

 Score = 71.2 bits (173), Expect = 1e-09
 Identities = 36/96 (37%), Positives = 57/96 (59%)
 Frame = +3

Query: 741  FWVQIWDLPKVRINQANIRKIGAELGEVCEVDLSCPPDFNQPVARVKIEMDIKERLTKEQ 920
            FWV++++LP    ++ +IR IG  +G+V EVD           AR+++ +DI + L + Q
Sbjct: 126  FWVRVYNLPMRCRSEQHIRMIGGCIGDVLEVDTH--EILWDKSARIRVLIDITKPLRRVQ 183

Query: 921  NIKLETGESLVVRFKYEKLEIFCYFCGIIGHDQYNC 1028
               L+ G S +V  KYE+L  FC+ CG+IGH   +C
Sbjct: 184  RFALKNGVSALVEIKYERLPTFCFLCGVIGHIGRDC 219


>emb|CCA66039.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 488

 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 36/97 (37%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
 Frame = +3

Query: 741  FWVQIWDLPKVRINQANIRKIGAELGEVCEVDLSCPPDFN-QPVARVKIEMDIKERLTKE 917
            FWV+I++LP    +   +R I   LG V EVD+    DF  +   RVK+E++I + L + 
Sbjct: 126  FWVRIYNLPFNCRSDTEVRAIAGGLGPVLEVDID---DFGLERFCRVKVELNIFKPLRRR 182

Query: 918  QNIKLETGESLVVRFKYEKLEIFCYFCGIIGHDQYNC 1028
            Q I+ + G    + +KYE+L  FC+ CG++GH   +C
Sbjct: 183  QRIRRKDGAVASIDYKYERLPHFCFRCGVLGHGDKDC 219


>gb|AAQ19327.1| bZIP-like protein [Oryza sativa Japonica Group]
          Length = 2367

 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
 Frame = +3

Query: 723  NFDLVKFWVQIWDLPKVRINQANIRKIGAELGEVCEVDLSCPPDFNQPVARVKIEMDIKE 902
            N D V  WV+I+DLP V +N+A     G+++G+V EVD+           R+++++ +  
Sbjct: 438  NLDTVPIWVRIYDLPLVMMNRARGELYGSKMGKVREVDVQEDGCNKHDFFRIRVDLPVNR 497

Query: 903  RLTKEQNIKLET-GESLVVRF--KYEKLEIFCYFCGIIGHDQYNCRIR 1037
             L +   IK++  G+    RF  +YE++  FC+FCG IGH    C  R
Sbjct: 498  PLRRMLAIKIKVQGKEETRRFHLRYERVPHFCFFCGFIGHSDKECEKR 545


>emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]
          Length = 652

 Score = 69.3 bits (168), Expect = 4e-09
 Identities = 29/98 (29%), Positives = 59/98 (60%)
 Frame = +3

Query: 735  VKFWVQIWDLPKVRINQANIRKIGAELGEVCEVDLSCPPDFNQPVARVKIEMDIKERLTK 914
            V FW+Q++D+P   ++    +++G  +G+  + D++      +   R+++ +D+++ L +
Sbjct: 70   VLFWIQVYDIPVGSMSLNVGKQLGNFIGKFVDYDINNNAGLWRNFMRIRVLLDVRQPLKR 129

Query: 915  EQNIKLETGESLVVRFKYEKLEIFCYFCGIIGHDQYNC 1028
             + I+   GE  +V FKYE+L  FCY CG++GH +  C
Sbjct: 130  WKKIRKPQGEWSLVHFKYERLSTFCYLCGMLGHSEKFC 167


>gb|EEE65704.1| hypothetical protein OsJ_21338 [Oryza sativa Japonica Group]
          Length = 901

 Score = 68.9 bits (167), Expect = 6e-09
 Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
 Frame = +3

Query: 735  VKFWVQIWDLPKVRINQANIRKIGAELGEVCEVDLSCPPDFNQPVARVKIEMDIKERLTK 914
            V  WV+I+DLP V +N+A     G++LG+V EVD+           R+++++ +   L +
Sbjct: 363  VPIWVRIYDLPLVMMNKARGELYGSKLGKVREVDVQQNGSNKHDFFRIRVDLPVNRPLKR 422

Query: 915  EQNIKLE-TGESLVVRF--KYEKLEIFCYFCGIIGHDQYNCRIR 1037
            +  IK++  G   + RF  +YE++  FC+FCG IGH    C  R
Sbjct: 423  QIAIKIKIKGAEEIRRFNLRYERVPHFCFFCGFIGHSDKECEKR 466


Top