BLASTX nr result
ID: Coptis25_contig00004758
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00004758 (2160 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EAW92202.1| hCG1809684 [Homo sapiens] 60 2e-06 >gb|EAW92202.1| hCG1809684 [Homo sapiens] Length = 712 Score = 60.1 bits (144), Expect = 2e-06 Identities = 49/150 (32%), Positives = 79/150 (52%), Gaps = 12/150 (8%) Frame = -2 Query: 2033 GKTCEPLE--PLCQSASYDVESTLLPGKTCDSLELPSQNASYCE--NSTLILGKTCKPLE 1866 G +C+ L P+ S+ + + S+ PG CD L S C+ +S+LI G +C L Sbjct: 256 GSSCDMLSSSPIPGSSCHLLSSSPNPGSYCDLLSSSPNPGSSCDLLSSSLIPGSSCDLLS 315 Query: 1865 LSSQNASSDE--NSTLIPGKTCKSLELSNQNESSDE--NSTLIPGNACESYRSKKR--KT 1704 S SS + +S+LIPG +C L S SS + +S+LIPG++C+ S + Sbjct: 316 SSPNPGSSCDLLSSSLIPGSSCDLLSSSPNPGSSCDLLSSSLIPGSSCDLLSSSPNPGSS 375 Query: 1703 CE-SLELPNQIASYN-ENSTPIPGKTCESL 1620 C+ PN +S + +S+P PG +C++L Sbjct: 376 CDLRSSSPNPGSSCDLRSSSPNPGSSCDTL 405 Score = 58.5 bits (140), Expect = 7e-06 Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 12/176 (6%) Frame = -2 Query: 2111 LPGNTRELLEPPCQSVAYDD--KSALLAGKTCEPLEPLCQSASYDVESTLLPGKTCDSLE 1938 +PG++ LL +Y D S+ G +C+ L S+L+PG +CD L Sbjct: 267 IPGSSCHLLSSSPNPGSYCDLLSSSPNPGSSCDLLS-----------SSLIPGSSCDLLS 315 Query: 1937 LPSQNASYCE--NSTLILGKTCKPLELSSQNASSDE--NSTLIPGKTCKSLELS-NQNES 1773 S C+ +S+LI G +C L S SS + +S+LIPG +C L S N S Sbjct: 316 SSPNPGSSCDLLSSSLIPGSSCDLLSSSPNPGSSCDLLSSSLIPGSSCDLLSSSPNPGSS 375 Query: 1772 SD-ENSTLIPGNACESYRSKKR--KTCESL-ELPNQIASYN-ENSTPIPGKTCESL 1620 D +S+ PG++C+ S +C++L PN +S + +S+P PG +C+ L Sbjct: 376 CDLRSSSPNPGSSCDLRSSSPNPGSSCDTLSSSPNPGSSCDLLSSSPNPGSSCDLL 431