BLASTX nr result

ID: Coptis25_contig00004746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004746
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_671779.1| Aminotransferase-like, plant mobile domain fami...    55   6e-06

>ref|NP_671779.1| Aminotransferase-like, plant mobile domain family protein
           [Arabidopsis thaliana] gi|330250784|gb|AEC05878.1|
           Aminotransferase-like, plant mobile domain family
           protein [Arabidopsis thaliana]
          Length = 667

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/84 (38%), Positives = 44/84 (52%)
 Frame = -1

Query: 254 DYAVHVAHDIWERRKDCGALKCVSHLAKLSQWDFKNECERSSRFAQQLRRTGLFDLVEGY 75
           D   HV+  +W+ ++  GAL+C  H +KL +W  K       +  + + R G   L    
Sbjct: 17  DQEKHVSSAVWDGQER-GALRCHEHTSKLGEWKLK------PKQIELVERAGFGFLRRIP 69

Query: 74  HEHMDPPLISAFVERWHPETNTFH 3
              +D PLISA VERW  ETNTFH
Sbjct: 70  AISLDNPLISALVERWRRETNTFH 93


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