BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004743
         (1094 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276595.1| PREDICTED: mRNA turnover protein 4 homolog [...   387   e-105
gb|ABA40425.1| unknown [Solanum tuberosum] gi|413968558|gb|AFW90...   377   e-102
ref|XP_002317075.1| predicted protein [Populus trichocarpa] gi|2...   369   e-100
ref|XP_002299012.1| predicted protein [Populus trichocarpa] gi|1...   366   5e-99
gb|AFK33945.1| unknown [Lotus japonicus]                              355   8e-96

>ref|XP_002276595.1| PREDICTED: mRNA turnover protein 4 homolog [Vitis vinifera]
           gi|298204604|emb|CBI23879.3| unnamed protein product
           [Vitis vinifera]
          Length = 229

 Score =  387 bits (993), Expect = e-105
 Identities = 190/229 (82%), Positives = 215/229 (93%)
 Frame = +2

Query: 68  MPKSKRNRAVTLSKTKKKGRGHKEEIVNTIRQAIENYNSIYVFTYENMRNLKFKEFREQL 247
           MPKSKR+R VTLSKTKKKGRGHKE IVN+IRQA+ENY+SIYVF++ENMRNLKFKEFRE+L
Sbjct: 1   MPKSKRDRPVTLSKTKKKGRGHKESIVNSIRQAVENYSSIYVFSFENMRNLKFKEFREKL 60

Query: 248 KSTSRFFLGSNKVMQVSLGRSDSDEIRPGLYKVSKLLRGNSGLFFTNLPKEEVVRLFEEF 427
           KSTSRFFLGSNKVMQ+++GRS +DEIRPGL KVSKLL G++GLFFTNLPKEEV RLF E+
Sbjct: 61  KSTSRFFLGSNKVMQIAIGRSVADEIRPGLRKVSKLLHGDTGLFFTNLPKEEVQRLFNEY 120

Query: 428 KVHDFARTGSTITEKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 607
           + +DFARTGST  EKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG
Sbjct: 121 EEYDFARTGSTAVEKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 180

Query: 608 SSLSPESARILRLLGIQMATFRLQLLCRWSPEDFEVFKEGQEFSDVESS 754
           + LSPESARILRLLGI+MATFRL L+CRWSP++F+++KEG + SDVESS
Sbjct: 181 TPLSPESARILRLLGIKMATFRLHLVCRWSPDEFDLYKEGLDDSDVESS 229


>gb|ABA40425.1| unknown [Solanum tuberosum] gi|413968558|gb|AFW90616.1| putative
           ribosomal protein L1 [Solanum tuberosum]
          Length = 229

 Score =  377 bits (968), Expect = e-102
 Identities = 184/229 (80%), Positives = 211/229 (92%)
 Frame = +2

Query: 68  MPKSKRNRAVTLSKTKKKGRGHKEEIVNTIRQAIENYNSIYVFTYENMRNLKFKEFREQL 247
           MPKSKRNRAVTLSKTKKKG+ HKE IVN+IR+  E Y+S YVF++ENMRNLKFKEFR+QL
Sbjct: 1   MPKSKRNRAVTLSKTKKKGKEHKENIVNSIRECAEKYSSAYVFSFENMRNLKFKEFRDQL 60

Query: 248 KSTSRFFLGSNKVMQVSLGRSDSDEIRPGLYKVSKLLRGNSGLFFTNLPKEEVVRLFEEF 427
           KS+SRFFLGSNKVMQV+LGRSDSDEIRPGL+K+SKL+RG+SGL FTNL KEEV RLF E+
Sbjct: 61  KSSSRFFLGSNKVMQVALGRSDSDEIRPGLHKISKLVRGDSGLCFTNLSKEEVQRLFNEY 120

Query: 428 KVHDFARTGSTITEKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 607
           + HDFARTG+T TEKVEL+EGPLDQFTHEMEPFLRKQGMPVRLN+GVVELVSDFVVCEEG
Sbjct: 121 EEHDFARTGTTATEKVELQEGPLDQFTHEMEPFLRKQGMPVRLNRGVVELVSDFVVCEEG 180

Query: 608 SSLSPESARILRLLGIQMATFRLQLLCRWSPEDFEVFKEGQEFSDVESS 754
             LSPE+ARILRLLG +MATFRL L+CRWSP++FE+++EG E SD+ESS
Sbjct: 181 RPLSPEAARILRLLGKKMATFRLHLICRWSPDEFEIYREGLEESDIESS 229


>ref|XP_002317075.1| predicted protein [Populus trichocarpa] gi|222860140|gb|EEE97687.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score =  369 bits (948), Expect = e-100
 Identities = 183/229 (79%), Positives = 207/229 (90%)
 Frame = +2

Query: 68  MPKSKRNRAVTLSKTKKKGRGHKEEIVNTIRQAIENYNSIYVFTYENMRNLKFKEFREQL 247
           MPKSKRNR VTLSKTKKKGR HKE IVN+IR A+E YNSIYVF++ENMRNLKFKEFREQ 
Sbjct: 1   MPKSKRNRPVTLSKTKKKGREHKESIVNSIRDAVEKYNSIYVFSFENMRNLKFKEFREQH 60

Query: 248 KSTSRFFLGSNKVMQVSLGRSDSDEIRPGLYKVSKLLRGNSGLFFTNLPKEEVVRLFEEF 427
           K TSRFFLGSNKVMQVSLGRS +DEIRPGL+KVSKLL G+SGLF TNL +EEV RLF E+
Sbjct: 61  KLTSRFFLGSNKVMQVSLGRSAADEIRPGLHKVSKLLCGDSGLFLTNLSREEVERLFNEY 120

Query: 428 KVHDFARTGSTITEKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 607
           + +DFARTG+T TE VELKEGPL+QFTHEMEPFLRKQGMPVRLNKGV++LVS+FVVCEEG
Sbjct: 121 EEYDFARTGTTATEMVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGVIDLVSNFVVCEEG 180

Query: 608 SSLSPESARILRLLGIQMATFRLQLLCRWSPEDFEVFKEGQEFSDVESS 754
             LSPES+RILRLLG +MATFRL L+CRWSPEDFE+++EG + SDVES+
Sbjct: 181 KPLSPESSRILRLLGTKMATFRLHLICRWSPEDFELYREGLDESDVESA 229


>ref|XP_002299012.1| predicted protein [Populus trichocarpa] gi|118486150|gb|ABK94918.1|
           unknown [Populus trichocarpa]
           gi|222846270|gb|EEE83817.1| predicted protein [Populus
           trichocarpa]
          Length = 229

 Score =  366 bits (940), Expect = 5e-99
 Identities = 182/229 (79%), Positives = 205/229 (89%)
 Frame = +2

Query: 68  MPKSKRNRAVTLSKTKKKGRGHKEEIVNTIRQAIENYNSIYVFTYENMRNLKFKEFREQL 247
           MPKSKRNR VTLSKTKKKGR HKE IVN+IR A+E YNSIYVF++ENMRNLKFKEFREQ 
Sbjct: 1   MPKSKRNRPVTLSKTKKKGREHKESIVNSIRDAVEKYNSIYVFSFENMRNLKFKEFREQH 60

Query: 248 KSTSRFFLGSNKVMQVSLGRSDSDEIRPGLYKVSKLLRGNSGLFFTNLPKEEVVRLFEEF 427
           K TSRFFLGSNKVMQVSLGRS +DEIRPGL+KVSKLL G++GLF TNLP+EEV RLF E+
Sbjct: 61  KLTSRFFLGSNKVMQVSLGRSAADEIRPGLHKVSKLLCGDAGLFLTNLPREEVERLFNEY 120

Query: 428 KVHDFARTGSTITEKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 607
           + +DFARTG+T TE VELKEGPL+QFTHEMEPFLRKQGMPVRLNKGV+ELVSDFVV EEG
Sbjct: 121 EEYDFARTGTTATETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGVIELVSDFVVSEEG 180

Query: 608 SSLSPESARILRLLGIQMATFRLQLLCRWSPEDFEVFKEGQEFSDVESS 754
             LSPE ARILRLLG + ATF+L L+CRWSPEDFE+++EG + SDVES+
Sbjct: 181 KPLSPECARILRLLGTKTATFKLHLICRWSPEDFELYREGLDDSDVESA 229


>gb|AFK33945.1| unknown [Lotus japonicus]
          Length = 229

 Score =  355 bits (912), Expect = 8e-96
 Identities = 176/229 (76%), Positives = 203/229 (88%)
 Frame = +2

Query: 68  MPKSKRNRAVTLSKTKKKGRGHKEEIVNTIRQAIENYNSIYVFTYENMRNLKFKEFREQL 247
           MPKSKRN+ VTLSKTKKKGR HKE IVN IR A E Y+S+YVF++ENMRNLKFKEFR++L
Sbjct: 1   MPKSKRNKQVTLSKTKKKGREHKEVIVNAIRDAAEKYSSLYVFSFENMRNLKFKEFRDRL 60

Query: 248 KSTSRFFLGSNKVMQVSLGRSDSDEIRPGLYKVSKLLRGNSGLFFTNLPKEEVVRLFEEF 427
           KS+SRFFLGSNKVMQV+LGRS SDEI+P LYKVSKLLRG+SG+FFTNL KEEV RLF  +
Sbjct: 61  KSSSRFFLGSNKVMQVALGRSASDEIKPRLYKVSKLLRGDSGMFFTNLSKEEVERLFNGY 120

Query: 428 KVHDFARTGSTITEKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 607
           + +DFARTG   TEKV+L+EGPL+QFTHEMEPFLRKQGMPVRLNKGVVELVSD VVCEEG
Sbjct: 121 EEYDFARTGGIATEKVDLQEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDLVVCEEG 180

Query: 608 SSLSPESARILRLLGIQMATFRLQLLCRWSPEDFEVFKEGQEFSDVESS 754
             LSPE++RILRLLGI+MATFRL L+CRW+P+DFE++ +G   SDVE S
Sbjct: 181 KPLSPEASRILRLLGIKMATFRLHLVCRWTPDDFELYIDGPGDSDVECS 229