BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004740
         (1155 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531294.1| conserved hypothetical protein [Ricinus comm...   129   1e-27
ref|XP_002319073.1| predicted protein [Populus trichocarpa] gi|1...   128   2e-27
ref|XP_002328498.1| predicted protein [Populus trichocarpa] gi|1...   127   5e-27
ref|XP_004135654.1| PREDICTED: sec-independent protein transloca...   117   5e-24
ref|XP_004171639.1| PREDICTED: sec-independent protein transloca...   115   2e-23

>ref|XP_002531294.1| conserved hypothetical protein [Ricinus communis]
           gi|223529127|gb|EEF31107.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 149

 Score =  129 bits (325), Expect = 1e-27
 Identities = 82/153 (53%), Positives = 102/153 (66%), Gaps = 10/153 (6%)
 Frame = +3

Query: 51  MEISAIITCSVPKT----PFSSCNSSLFNNGSRTILLNNNKKRTS-CLVLNRNRSR---- 203
           MEIS++ T S+ +     PFSS +S+ FNN +   LLN NKK ++  LVL + RSR    
Sbjct: 1   MEISSM-TLSLSRPTHAFPFSSSHSTFFNNAN---LLNTNKKLSNKTLVLGKTRSRTERT 56

Query: 204 -KGLTVRSLFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKX 380
            KGLT  +LFGLGVPELVVIAGVAALVFGPKKLPEVG+SIGKTVKSFQ+AAKEFESELK 
Sbjct: 57  RKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQEAAKEFESELKK 116

Query: 381 XXXXXXXXXXXXXXXXXXXXQNETKIPSTEESL 479
                               + + ++ S++ES+
Sbjct: 117 EPDSALESPGETPTAISEEKKQDAEVSSSKESV 149


>ref|XP_002319073.1| predicted protein [Populus trichocarpa] gi|118483502|gb|ABK93649.1|
           unknown [Populus trichocarpa]
           gi|222857449|gb|EEE94996.1| predicted protein [Populus
           trichocarpa]
          Length = 150

 Score =  128 bits (322), Expect = 2e-27
 Identities = 77/118 (65%), Positives = 87/118 (73%), Gaps = 9/118 (7%)
 Frame = +3

Query: 51  MEISAIITCSVPKTP----FSSCNSSLFNNGSRTILLNNNKKRTSCLVLNRN-----RSR 203
           MEIS++ T S+PK P    FSS NS+ FN    T    N  K  + LVL +      R++
Sbjct: 3   MEISSV-TLSLPKPPRSLPFSSSNSTFFN----TTAFFNKTKSCNSLVLGKTTSGSQRAK 57

Query: 204 KGLTVRSLFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELK 377
           KGLT  +LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTV+SFQQAAKEFESELK
Sbjct: 58  KGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVRSFQQAAKEFESELK 115


>ref|XP_002328498.1| predicted protein [Populus trichocarpa] gi|118482145|gb|ABK93003.1|
           unknown [Populus trichocarpa]
           gi|222838213|gb|EEE76578.1| predicted protein [Populus
           trichocarpa]
          Length = 148

 Score =  127 bits (319), Expect = 5e-27
 Identities = 79/152 (51%), Positives = 97/152 (63%), Gaps = 9/152 (5%)
 Frame = +3

Query: 51  MEISAIITCSVPKTP----FSSCNSSLFNNGSRTILLNNNKKRTSCLVLNRNRSR----- 203
           MEIS+I T S PK P    FSS  S+ FN    T   N + K  + LVL + RSR     
Sbjct: 1   MEISSI-TLSFPKPPPCLPFSSSQSTFFNT---TAFFNKSSKSYNSLVLGKTRSRSQRAK 56

Query: 204 KGLTVRSLFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKXX 383
           KGLT  +LFGLGVPELVVIAGVA L+FGPK+LPEVG+SIGKTVKSFQQAAKEFESELK  
Sbjct: 57  KGLTCNALFGLGVPELVVIAGVATLLFGPKQLPEVGRSIGKTVKSFQQAAKEFESELKKE 116

Query: 384 XXXXXXXXXXXXXXXXXXXQNETKIPSTEESL 479
                              ++++++ S++ES+
Sbjct: 117 PDSTSDTPGEQPTTISEEKKHDSEVSSSKESV 148


>ref|XP_004135654.1| PREDICTED: sec-independent protein translocase protein TATA,
           chloroplastic-like [Cucumis sativus]
          Length = 158

 Score =  117 bits (293), Expect = 5e-24
 Identities = 70/114 (61%), Positives = 78/114 (68%), Gaps = 12/114 (10%)
 Frame = +3

Query: 72  TCSVPKTP------FSSCNSSLF-NNGSRTILLNNNKKRTSCLVLNRNRS-----RKGLT 215
           T S+PK P      FSS  S+ F NN + +     +   +S L L   R+      KG T
Sbjct: 11  TSSIPKLPPSLSPSFSSSKSAFFANNATTSFFTYGDHNHSSLLRLTSFRTTTKTTHKGFT 70

Query: 216 VRSLFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELK 377
             +LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELK
Sbjct: 71  CNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELK 124


>ref|XP_004171639.1| PREDICTED: sec-independent protein translocase protein TATA,
           chloroplastic-like, partial [Cucumis sativus]
          Length = 146

 Score =  115 bits (289), Expect = 2e-23
 Identities = 69/112 (61%), Positives = 77/112 (68%), Gaps = 12/112 (10%)
 Frame = +3

Query: 78  SVPKTP------FSSCNSSLF-NNGSRTILLNNNKKRTSCLVLNRNRS-----RKGLTVR 221
           S+PK P      FSS  S+ F NN + +     +   +S L L   R+      KG T  
Sbjct: 1   SIPKLPPSLSPSFSSSKSAFFANNATTSFFTYGDHNHSSLLRLTSFRTTTKTTHKGFTCN 60

Query: 222 SLFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELK 377
           +LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELK
Sbjct: 61  ALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELK 112