BLASTX nr result

ID: Coptis25_contig00004730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004730
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37208.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_002268946.1| PREDICTED: uncharacterized protein LOC100258...   116   2e-24
emb|CAN61503.1| hypothetical protein VITISV_011734 [Vitis vinifera]   115   4e-24
ref|NP_194598.1| uncharacterized protein [Arabidopsis thaliana] ...   111   7e-23
emb|CAA22983.1| hypothetical protein [Arabidopsis thaliana] gi|7...   111   7e-23

>emb|CBI37208.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  116 bits (290), Expect = 2e-24
 Identities = 47/102 (46%), Positives = 67/102 (65%)
 Frame = -1

Query: 458 CARFPFNTNAHEKHCDLCHCYVCDTRAPCVYWGTGGSGGDHCHSTDKEKTWREQRECFKQ 279
           CA+FPFN+  H++HCD CHCYVCD+ APC +WGTG +  DHCH+T+K++ W +QR+ F+ 
Sbjct: 117 CAKFPFNSTTHDRHCDQCHCYVCDSLAPCGHWGTGMNIVDHCHATNKDEFWVDQRKSFRL 176

Query: 278 GKMAQIPASKHHETIPLVAPTTHPTLTHSEPLNSGNVSTRTN 153
           GK  Q+P  KH   +P V+  +   L    P+    VS  T+
Sbjct: 177 GKSQQVPIQKHATALPQVSQNSSFPLLQPNPIWQNQVSRPTS 218


>ref|XP_002268946.1| PREDICTED: uncharacterized protein LOC100258397 [Vitis vinifera]
          Length = 511

 Score =  116 bits (290), Expect = 2e-24
 Identities = 47/102 (46%), Positives = 67/102 (65%)
 Frame = -1

Query: 458 CARFPFNTNAHEKHCDLCHCYVCDTRAPCVYWGTGGSGGDHCHSTDKEKTWREQRECFKQ 279
           CA+FPFN+  H++HCD CHCYVCD+ APC +WGTG +  DHCH+T+K++ W +QR+ F+ 
Sbjct: 117 CAKFPFNSTTHDRHCDQCHCYVCDSLAPCGHWGTGMNIVDHCHATNKDEFWVDQRKSFRL 176

Query: 278 GKMAQIPASKHHETIPLVAPTTHPTLTHSEPLNSGNVSTRTN 153
           GK  Q+P  KH   +P V+  +   L    P+    VS  T+
Sbjct: 177 GKSQQVPIQKHATALPQVSQNSSFPLLQPNPIWQNQVSRPTS 218


>emb|CAN61503.1| hypothetical protein VITISV_011734 [Vitis vinifera]
          Length = 441

 Score =  115 bits (288), Expect = 4e-24
 Identities = 47/102 (46%), Positives = 66/102 (64%)
 Frame = -1

Query: 458 CARFPFNTNAHEKHCDLCHCYVCDTRAPCVYWGTGGSGGDHCHSTDKEKTWREQRECFKQ 279
           CA+FPFN+  H++HCD CHCYVCD+ APC +WGTG +  DHCH+T+K++ W  QR+ F+ 
Sbjct: 47  CAKFPFNSTTHDRHCDQCHCYVCDSLAPCGHWGTGMNIVDHCHATNKDEFWVNQRKSFRL 106

Query: 278 GKMAQIPASKHHETIPLVAPTTHPTLTHSEPLNSGNVSTRTN 153
           GK  Q+P  KH   +P V+  +   L    P+    VS  T+
Sbjct: 107 GKSQQVPIQKHATALPQVSQNSSFPLLQPNPIWQNQVSRPTS 148


>ref|NP_194598.1| uncharacterized protein [Arabidopsis thaliana]
           gi|115311409|gb|ABI93885.1| At4g28690 [Arabidopsis
           thaliana] gi|332660126|gb|AEE85526.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 448

 Score =  111 bits (277), Expect = 7e-23
 Identities = 43/73 (58%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
 Frame = -1

Query: 464 HLCARFPFNTNAHEKHCDLCHCYVCDTRAPCVYWGTGG-SGGDHCHSTDKEKTWREQREC 288
           H CA++PF +  H+  C++CHCYVCDTRAPC YW +GG S  DHCH+ DKEKTW +QREC
Sbjct: 100 HACAKYPFKSTLHQTFCEMCHCYVCDTRAPCTYWFSGGISNTDHCHANDKEKTWNDQREC 159

Query: 287 FKQGKMAQIPASK 249
            + G M   P SK
Sbjct: 160 IRTGNMLPRPVSK 172


>emb|CAA22983.1| hypothetical protein [Arabidopsis thaliana]
           gi|7269724|emb|CAB81457.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 419

 Score =  111 bits (277), Expect = 7e-23
 Identities = 43/73 (58%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
 Frame = -1

Query: 464 HLCARFPFNTNAHEKHCDLCHCYVCDTRAPCVYWGTGG-SGGDHCHSTDKEKTWREQREC 288
           H CA++PF +  H+  C++CHCYVCDTRAPC YW +GG S  DHCH+ DKEKTW +QREC
Sbjct: 71  HACAKYPFKSTLHQTFCEMCHCYVCDTRAPCTYWFSGGISNTDHCHANDKEKTWNDQREC 130

Query: 287 FKQGKMAQIPASK 249
            + G M   P SK
Sbjct: 131 IRTGNMLPRPVSK 143


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