BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004717
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_200667.2| Ran-binding protein 1-c [Arabidopsis thaliana] ...   101   6e-20
ref|XP_002866276.1| hypothetical protein ARALYDRAFT_495982 [Arab...   101   6e-20
dbj|BAA97328.1| unnamed protein product [Arabidopsis thaliana]        101   6e-20
ref|XP_002892383.1| hypothetical protein ARALYDRAFT_334013 [Arab...   100   2e-19
emb|CAA66046.1| atranbp1b [Arabidopsis thaliana]                       99   3e-19

>ref|NP_200667.2| Ran-binding protein 1-c [Arabidopsis thaliana]
           gi|75275082|sp|P92985.1|RBP1C_ARATH RecName:
           Full=Ran-binding protein 1 homolog c
           gi|1732511|gb|AAB38776.1| Ran binding protein 1 homolog
           [Arabidopsis thaliana] gi|90568020|gb|ABD94080.1|
           At5g58590 [Arabidopsis thaliana]
           gi|332009690|gb|AED97073.1| Ran-binding protein 1-c
           [Arabidopsis thaliana]
          Length = 219

 Score =  101 bits (252), Expect = 6e-20
 Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
 Frame = -1

Query: 286 GTVKLLNHKITGKVRLIMR-SKSLKIYANHRISSGMLVDVCTSNSTSCVWAAPDFSEGDS 110
           GTVKLL HK TGKVRL+MR SK+LKI ANH ISSGM V   + N  SC+W A DFS+G+ 
Sbjct: 71  GTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLWHATDFSDGEL 130

Query: 109 KEKLFRIQFGSVDNCDTFMQLF 44
           K++LF I+F S++NC TFM+ F
Sbjct: 131 KDELFCIRFASIENCKTFMEKF 152


>ref|XP_002866276.1| hypothetical protein ARALYDRAFT_495982 [Arabidopsis lyrata subsp.
           lyrata] gi|297312111|gb|EFH42535.1| hypothetical protein
           ARALYDRAFT_495982 [Arabidopsis lyrata subsp. lyrata]
          Length = 219

 Score =  101 bits (252), Expect = 6e-20
 Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
 Frame = -1

Query: 286 GTVKLLNHKITGKVRLIMR-SKSLKIYANHRISSGMLVDVCTSNSTSCVWAAPDFSEGDS 110
           GTVKLL HK TGKVRL+MR SK+LKI ANH ISSGM V   + N  SC+W A DFS+G+ 
Sbjct: 71  GTVKLLKHKQTGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLWHATDFSDGEL 130

Query: 109 KEKLFRIQFGSVDNCDTFMQLF 44
           K++LF I+F S++NC TFM+ F
Sbjct: 131 KDELFCIRFASIENCKTFMEKF 152


>dbj|BAA97328.1| unnamed protein product [Arabidopsis thaliana]
          Length = 248

 Score =  101 bits (252), Expect = 6e-20
 Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
 Frame = -1

Query: 286 GTVKLLNHKITGKVRLIMR-SKSLKIYANHRISSGMLVDVCTSNSTSCVWAAPDFSEGDS 110
           GTVKLL HK TGKVRL+MR SK+LKI ANH ISSGM V   + N  SC+W A DFS+G+ 
Sbjct: 71  GTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLWHATDFSDGEL 130

Query: 109 KEKLFRIQFGSVDNCDTFMQLF 44
           K++LF I+F S++NC TFM+ F
Sbjct: 131 KDELFCIRFASIENCKTFMEKF 152


>ref|XP_002892383.1| hypothetical protein ARALYDRAFT_334013 [Arabidopsis lyrata subsp.
           lyrata] gi|297338225|gb|EFH68642.1| hypothetical protein
           ARALYDRAFT_334013 [Arabidopsis lyrata subsp. lyrata]
          Length = 705

 Score =  100 bits (248), Expect = 2e-19
 Identities = 49/83 (59%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
 Frame = -1

Query: 286 GTVKLLNHKITGKVRLIMR-SKSLKIYANHRISSGMLVDVCTSNSTSCVWAAPDFSEGDS 110
           GTVKLL HK TGK+RL+MR SK+LKI ANH + SGM V     N  SCVW A DF++G+ 
Sbjct: 549 GTVKLLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCVWHARDFADGEL 608

Query: 109 KEKLFRIQFGSVDNCDTFMQLFR 41
           K++LF I+F S++NC TFMQ F+
Sbjct: 609 KDELFCIRFASIENCKTFMQKFK 631


>emb|CAA66046.1| atranbp1b [Arabidopsis thaliana]
          Length = 217

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 47/83 (56%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
 Frame = -1

Query: 286 GTVKLLNHKITGKVRLIMR-SKSLKIYANHRISSGMLVDVCTSNSTSCVWAAPDFSEGDS 110
           GTVK + H+++GK+RL+MR SK+LKI ANH + SGM V     N  SCVW A DFS+G+ 
Sbjct: 74  GTVKFVKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARDFSDGEL 133

Query: 109 KEKLFRIQFGSVDNCDTFMQLFR 41
           K++LF I+FGSV+NC  FMQ F+
Sbjct: 134 KDELFCIRFGSVENCKAFMQKFK 156