BLASTX nr result

ID: Coptis25_contig00004709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004709
         (1579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAO91858.1| putative lysine decarbxylase [Nicotiana tabacum]      283   2e-87
ref|XP_002311733.1| predicted protein [Populus trichocarpa] gi|2...   278   3e-87
ref|XP_002529033.1| carboxy-lyase, putative [Ricinus communis] g...   271   4e-86
ref|XP_002276560.1| PREDICTED: uncharacterized protein LOC100243...   266   4e-83
ref|XP_003532159.1| PREDICTED: probable cytokinin riboside 5'-mo...   270   6e-83

>emb|CAO91858.1| putative lysine decarbxylase [Nicotiana tabacum]
          Length = 305

 Score =  283 bits (725), Expect(2) = 2e-87
 Identities = 139/205 (67%), Positives = 156/205 (76%)
 Frame = +3

Query: 555  IGNLLDCTTWTGVGPGLMDAATKGALQAKKPVGGFKIGREAGEWTTSQFHPYLPSETYLT 734
            I  LLDCTTW+G GPGLMDAAT+GALQA KPVGGFKIGREAGEWT S FHPYLPSE+YLT
Sbjct: 115  IATLLDCTTWSGAGPGLMDAATQGALQAGKPVGGFKIGREAGEWTASNFHPYLPSESYLT 174

Query: 735  CRXXXXXXXXXXXXXXXXXXETYLTCRFFSARKHGLVDAAMRCAASDRTAVIALPGGVGT 914
                                     CRFFSARKHGLVDA +RC +S+RTAV+ALPGG+GT
Sbjct: 175  -------------------------CRFFSARKHGLVDAVVRCKSSERTAVVALPGGIGT 209

Query: 915  LDEMFEILALIQLERVGSEHPVPFLVMNYDLYYSKLLAFFDDCEDWGTVSKGEVGSLWKV 1094
            LDE+FEI+ALIQLER+GS+ PVPFL+MNYD +YS LL F +DCE WGTVSK EV SLWKV
Sbjct: 210  LDEIFEIMALIQLERIGSQLPVPFLLMNYDSFYSNLLEFLNDCEKWGTVSKNEVSSLWKV 269

Query: 1095 CNGNTEALEYLREFYSCS*SKTERK 1169
            CN N+EAL YL EFY  S  +T RK
Sbjct: 270  CNNNSEALAYLTEFYGLSPVETGRK 294



 Score = 67.4 bits (163), Expect(2) = 2e-87
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = +2

Query: 359 KEIQNCYALIHKLGRGVVYLGSSRMGPGHPHYMQTVEL 472
           KEI  CY LIH+LGRG VYLGSSRMGP HPHY++T EL
Sbjct: 74  KEIDQCYELIHRLGRGAVYLGSSRMGPEHPHYIKTFEL 111


>ref|XP_002311733.1| predicted protein [Populus trichocarpa] gi|222851553|gb|EEE89100.1|
            predicted protein [Populus trichocarpa]
          Length = 226

 Score =  278 bits (711), Expect(2) = 3e-87
 Identities = 135/195 (69%), Positives = 149/195 (76%)
 Frame = +3

Query: 555  IGNLLDCTTWTGVGPGLMDAATKGALQAKKPVGGFKIGREAGEWTTSQFHPYLPSETYLT 734
            + NLLDCT+WTG GPGLMDAATKGAL+A KPVGGFKI +EAGEWT S FH YLPSETYLT
Sbjct: 54   VANLLDCTSWTGAGPGLMDAATKGALEAGKPVGGFKIAKEAGEWTASNFHSYLPSETYLT 113

Query: 735  CRXXXXXXXXXXXXXXXXXXETYLTCRFFSARKHGLVDAAMRCAASDRTAVIALPGGVGT 914
                                     CRFFSARKHGLVDAA+R + SDRTAV+ALPGG+GT
Sbjct: 114  -------------------------CRFFSARKHGLVDAAVRSSCSDRTAVVALPGGIGT 148

Query: 915  LDEMFEILALIQLERVGSEHPVPFLVMNYDLYYSKLLAFFDDCEDWGTVSKGEVGSLWKV 1094
            LDEMFEIL LIQL+R+GSE PVPFLVMNYD YY KLL F  DCE+WGTVSKGEV SLWK+
Sbjct: 149  LDEMFEILTLIQLQRIGSELPVPFLVMNYDSYYQKLLDFLGDCENWGTVSKGEVASLWKI 208

Query: 1095 CNGNTEALEYLREFY 1139
            C  N+EAL YL +FY
Sbjct: 209  CENNSEALAYLADFY 223



 Score = 72.0 bits (175), Expect(2) = 3e-87
 Identities = 32/41 (78%), Positives = 34/41 (82%)
 Frame = +2

Query: 359 KEIQNCYALIHKLGRGVVYLGSSRMGPGHPHYMQTVELARE 481
           KEI  CY LIH+LGRGVVYLGSSRMGP HPHY Q +EL RE
Sbjct: 13  KEIGRCYELIHRLGRGVVYLGSSRMGPDHPHYSQALELGRE 53


>ref|XP_002529033.1| carboxy-lyase, putative [Ricinus communis]
            gi|223531513|gb|EEF33344.1| carboxy-lyase, putative
            [Ricinus communis]
          Length = 302

 Score =  271 bits (694), Expect(2) = 4e-86
 Identities = 134/203 (66%), Positives = 148/203 (72%)
 Frame = +3

Query: 555  IGNLLDCTTWTGVGPGLMDAATKGALQAKKPVGGFKIGREAGEWTTSQFHPYLPSETYLT 734
            +  LLDCT+W G GPGLMDA  KGALQA KPVGGFKI +EAGEWT S FHPYLPSETYLT
Sbjct: 114  VAKLLDCTSWMGAGPGLMDATIKGALQAGKPVGGFKIAKEAGEWTASNFHPYLPSETYLT 173

Query: 735  CRXXXXXXXXXXXXXXXXXXETYLTCRFFSARKHGLVDAAMRCAASDRTAVIALPGGVGT 914
                                     CRFFSARKHGLVDAA+R   SDRTAV+ALPGG+GT
Sbjct: 174  -------------------------CRFFSARKHGLVDAAVRNTRSDRTAVVALPGGIGT 208

Query: 915  LDEMFEILALIQLERVGSEHPVPFLVMNYDLYYSKLLAFFDDCEDWGTVSKGEVGSLWKV 1094
            LDEMFEILALIQLER+GS  PVPF+VMNYD +Y KLL F  +CEDWGTVSKGEV  LWK+
Sbjct: 209  LDEMFEILALIQLERIGSALPVPFIVMNYDSFYQKLLDFIQNCEDWGTVSKGEVTPLWKI 268

Query: 1095 CNGNTEALEYLREFYSCS*SKTE 1163
            CN N+EAL YL +FY+   S  E
Sbjct: 269  CNSNSEALAYLTDFYNLHSSSDE 291



 Score = 75.1 bits (183), Expect(2) = 4e-86
 Identities = 32/41 (78%), Positives = 37/41 (90%)
 Frame = +2

Query: 359 KEIQNCYALIHKLGRGVVYLGSSRMGPGHPHYMQTVELARE 481
           KEI+ CY LIH+LGRGVVYLGSSRMGP HPHY+Q +EL+RE
Sbjct: 73  KEIERCYELIHRLGRGVVYLGSSRMGPDHPHYLQALELSRE 113


>ref|XP_002276560.1| PREDICTED: uncharacterized protein LOC100243479 [Vitis vinifera]
            gi|297737525|emb|CBI26726.3| unnamed protein product
            [Vitis vinifera]
          Length = 310

 Score =  266 bits (681), Expect(2) = 4e-83
 Identities = 133/195 (68%), Positives = 146/195 (74%)
 Frame = +3

Query: 555  IGNLLDCTTWTGVGPGLMDAATKGALQAKKPVGGFKIGREAGEWTTSQFHPYLPSETYLT 734
            + NLLDCT+WTG GPGLMDAA+KGALQA KPVGGFKIGREAG+ T   FHPYLPSETY T
Sbjct: 110  VANLLDCTSWTGAGPGLMDAASKGALQAGKPVGGFKIGREAGQQTALSFHPYLPSETYFT 169

Query: 735  CRXXXXXXXXXXXXXXXXXXETYLTCRFFSARKHGLVDAAMRCAASDRTAVIALPGGVGT 914
                                     CRFFSARKHGLVDAA+R    DRTAV+ALPGG+GT
Sbjct: 170  -------------------------CRFFSARKHGLVDAAVRSCNCDRTAVVALPGGIGT 204

Query: 915  LDEMFEILALIQLERVGSEHPVPFLVMNYDLYYSKLLAFFDDCEDWGTVSKGEVGSLWKV 1094
            LDE+FEILALIQL+R+GSE PVPFL+MNYD +YSKLL F  D E WGTV KGEV SLWKV
Sbjct: 205  LDEVFEILALIQLQRIGSELPVPFLLMNYDSFYSKLLDFLSDSECWGTVCKGEVESLWKV 264

Query: 1095 CNGNTEALEYLREFY 1139
            CN N+EAL YL EFY
Sbjct: 265  CNNNSEALSYLAEFY 279



 Score = 70.1 bits (170), Expect(2) = 4e-83
 Identities = 31/41 (75%), Positives = 35/41 (85%)
 Frame = +2

Query: 359 KEIQNCYALIHKLGRGVVYLGSSRMGPGHPHYMQTVELARE 481
           KEI+ CY LI+KLGRGVVYLGSSRMGP H HY+Q +EL RE
Sbjct: 69  KEIEQCYELINKLGRGVVYLGSSRMGPDHSHYLQALELGRE 109


>ref|XP_003532159.1| PREDICTED: probable cytokinin riboside 5'-monophosphate
            phosphoribohydrolase LOGL3-like [Glycine max]
          Length = 305

 Score =  270 bits (689), Expect(2) = 6e-83
 Identities = 136/213 (63%), Positives = 156/213 (73%), Gaps = 1/213 (0%)
 Frame = +3

Query: 555  IGNLLDCTTWTGVGPGLMDAATKGALQAKKPVGGFKIGREAGEWTTSQFHPYLPSETYLT 734
            I NLLDCT+W+G GPGLMDA T+G++ A KPVGGFKIGREAGEWT S FHPYLPSE YLT
Sbjct: 113  IANLLDCTSWSGAGPGLMDAVTQGSMLAGKPVGGFKIGREAGEWTASNFHPYLPSENYLT 172

Query: 735  CRXXXXXXXXXXXXXXXXXXETYLTCRFFSARKHGLVDAAMRCAASDRTAVIALPGGVGT 914
             R                         FFSARKHGLVDA +R  + D+TAV+ALPGG+GT
Sbjct: 173  FR-------------------------FFSARKHGLVDAVVRNNSFDKTAVVALPGGIGT 207

Query: 915  LDEMFEILALIQLERVGSEHPVPFLVMNYDLYYSKLLAFFDDCEDWGTVSKGEVGSLWKV 1094
            LDE+FEILALIQLER+GS+ PVPFL+MNYD +YSKLL F +DCE WGTVSKGEV SLWKV
Sbjct: 208  LDEVFEILALIQLERIGSKFPVPFLLMNYDSFYSKLLEFLNDCEGWGTVSKGEVASLWKV 267

Query: 1095 CNGNTEALEYLREFYSCS*S-KTERKTR*QMVY 1190
            CN N+EAL YL EFY  S S K++  T+    Y
Sbjct: 268  CNSNSEALAYLEEFYGISSSDKSKNVTKLYSTY 300



 Score = 66.2 bits (160), Expect(2) = 6e-83
 Identities = 29/41 (70%), Positives = 35/41 (85%)
 Frame = +2

Query: 359 KEIQNCYALIHKLGRGVVYLGSSRMGPGHPHYMQTVELARE 481
           +EI+ CY LI++LGRGVVYLGSSRMGP H HY+Q  ELA+E
Sbjct: 72  EEIKKCYELINRLGRGVVYLGSSRMGPSHSHYVQAQELAKE 112


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