BLASTX nr result

ID: Coptis25_contig00004692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004692
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280965.1| PREDICTED: caseinolytic peptidase B protein ...   106   2e-21
ref|XP_002324992.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-20
ref|XP_003620671.1| Ankyrin repeat domain-containing protein [Me...   101   6e-20
ref|XP_002514299.1| Protein cbxX, chromosomal, putative [Ricinus...   101   6e-20
ref|XP_003528921.1| PREDICTED: protein CbxX, chromosomal-like [G...   100   2e-19

>ref|XP_002280965.1| PREDICTED: caseinolytic peptidase B protein homolog [Vitis
           vinifera] gi|297738825|emb|CBI28070.3| unnamed protein
           product [Vitis vinifera]
          Length = 484

 Score =  106 bits (265), Expect = 2e-21
 Identities = 66/140 (47%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
 Frame = -2

Query: 419 NGMTPLRHAVQHSLQA--VSTVKTLLEYNASCSVTDNVRISMIYFYYDKCGPYSFKISYK 246
           NGMTPL  AV +SL+A   STVKTLL+YNA CS  DN                       
Sbjct: 117 NGMTPLHLAVWYSLRAEDCSTVKTLLDYNADCSSKDN----------------------- 153

Query: 245 KPLELQHGLTLINHLSNGTGSKDLSELLHLLNEEQKQCRVDEVCGELKAKMAEIEDIIST 66
                  G+T +NHLS G GS+ L ELLH   +EQ + R  E C E KAKM E+ED +S 
Sbjct: 154 ------EGMTPLNHLSQGPGSEKLRELLHRYLDEQIKRRALEACSETKAKMDELEDALSN 207

Query: 65  TTGLDDLKLQLRAWAKEMFL 6
             GL+DLK QLR WAK M L
Sbjct: 208 IVGLNDLKSQLRRWAKGMLL 227


>ref|XP_002324992.1| predicted protein [Populus trichocarpa] gi|222866426|gb|EEF03557.1|
           predicted protein [Populus trichocarpa]
          Length = 477

 Score =  102 bits (255), Expect = 2e-20
 Identities = 61/140 (43%), Positives = 79/140 (56%), Gaps = 2/140 (1%)
 Frame = -2

Query: 419 NGMTPLRHAVQHSLQAV--STVKTLLEYNASCSVTDNVRISMIYFYYDKCGPYSFKISYK 246
           NGMTPL  AV +S++A   STVKTLLEYNA CS  DN                       
Sbjct: 117 NGMTPLHLAVWYSIRAEDHSTVKTLLEYNADCSAEDN----------------------- 153

Query: 245 KPLELQHGLTLINHLSNGTGSKDLSELLHLLNEEQKQCRVDEVCGELKAKMAEIEDIIST 66
                  G+T +NHLS G GS+++ +LLH   EEQ++ +  E C + KAKM E+ED ++ 
Sbjct: 154 ------EGMTPLNHLSPGPGSEEVRKLLHWHLEEQRKRKALEACSKTKAKMDELEDALTN 207

Query: 65  TTGLDDLKLQLRAWAKEMFL 6
             GL +LK+QLR WAK M L
Sbjct: 208 VVGLHELKVQLRKWAKGMLL 227


>ref|XP_003620671.1| Ankyrin repeat domain-containing protein [Medicago truncatula]
           gi|355495686|gb|AES76889.1| Ankyrin repeat
           domain-containing protein [Medicago truncatula]
          Length = 479

 Score =  101 bits (252), Expect = 6e-20
 Identities = 63/140 (45%), Positives = 76/140 (54%), Gaps = 2/140 (1%)
 Frame = -2

Query: 419 NGMTPLRHAVQHSLQAVS--TVKTLLEYNASCSVTDNVRISMIYFYYDKCGPYSFKISYK 246
           NGMTPL  AV HSL+A    TVKTLLE+NA CS  DN                       
Sbjct: 117 NGMTPLHLAVWHSLRAEEFLTVKTLLEHNADCSAKDN----------------------- 153

Query: 245 KPLELQHGLTLINHLSNGTGSKDLSELLHLLNEEQKQCRVDEVCGELKAKMAEIEDIIST 66
                  G+T +NHLS G G+  L ELL+   EEQ++ R  + C E KAKM E+E  +S 
Sbjct: 154 ------EGMTPLNHLSQGPGNDKLRELLNWHLEEQRKRRAIKACSETKAKMDELEKELSN 207

Query: 65  TTGLDDLKLQLRAWAKEMFL 6
             GL+DLK+QLR WAK M L
Sbjct: 208 IVGLNDLKIQLRKWAKGMLL 227


>ref|XP_002514299.1| Protein cbxX, chromosomal, putative [Ricinus communis]
           gi|223546755|gb|EEF48253.1| Protein cbxX, chromosomal,
           putative [Ricinus communis]
          Length = 481

 Score =  101 bits (252), Expect = 6e-20
 Identities = 62/144 (43%), Positives = 78/144 (54%), Gaps = 2/144 (1%)
 Frame = -2

Query: 431 SPLQNGMTPLRHAVQHSLQA--VSTVKTLLEYNASCSVTDNVRISMIYFYYDKCGPYSFK 258
           S   NGMTPL  AV +S+++   STVKTLLEYNA CS  DN                   
Sbjct: 115 SKANNGMTPLHLAVWYSIRSDDFSTVKTLLEYNADCSAKDN------------------- 155

Query: 257 ISYKKPLELQHGLTLINHLSNGTGSKDLSELLHLLNEEQKQCRVDEVCGELKAKMAEIED 78
                      G+T +NHLS G GS+ L +LL    +EQ++ R  E C E KAKM E+E+
Sbjct: 156 ----------EGMTPMNHLSRGPGSEKLRQLLQWHIDEQRKRRALEACSETKAKMEELEN 205

Query: 77  IISTTTGLDDLKLQLRAWAKEMFL 6
            +S   GL +LK+QLR WAK M L
Sbjct: 206 ALSNIVGLHELKIQLRKWAKGMLL 229


>ref|XP_003528921.1| PREDICTED: protein CbxX, chromosomal-like [Glycine max]
          Length = 480

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 63/140 (45%), Positives = 76/140 (54%), Gaps = 2/140 (1%)
 Frame = -2

Query: 419 NGMTPLRHAVQHSLQAVS--TVKTLLEYNASCSVTDNVRISMIYFYYDKCGPYSFKISYK 246
           NGMTPL  AV +SL+A    TVKTLLEYNA CS  D+                       
Sbjct: 118 NGMTPLHLAVWYSLRAEEFLTVKTLLEYNADCSAKDD----------------------- 154

Query: 245 KPLELQHGLTLINHLSNGTGSKDLSELLHLLNEEQKQCRVDEVCGELKAKMAEIEDIIST 66
                  G+T +NHLS G G++ L ELL    EEQ++ R  E C E KAKM E+E  +S 
Sbjct: 155 ------EGMTPLNHLSQGPGTEKLRELLLWHLEEQRKQRAIEACSETKAKMDELEKELSN 208

Query: 65  TTGLDDLKLQLRAWAKEMFL 6
             GL+DLK+QLR WAK M L
Sbjct: 209 IVGLNDLKVQLRKWAKGMLL 228


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