BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004684
         (1667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526000.1| cleavage and polyadenylation specificity fac...   261   3e-67
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261...   256   1e-65
ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-...   250   7e-64
ref|XP_003529221.1| PREDICTED: E3 ubiquitin protein ligase RIE1-...   248   4e-63
ref|XP_002314782.1| predicted protein [Populus trichocarpa] gi|2...   246   1e-62

>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
            communis] gi|223534732|gb|EEF36424.1| cleavage and
            polyadenylation specificity factor, putative [Ricinus
            communis]
          Length = 963

 Score =  261 bits (668), Expect = 3e-67
 Identities = 122/196 (62%), Positives = 142/196 (72%), Gaps = 3/196 (1%)
 Frame = +1

Query: 631  TGNRSSIAKRCESINTMASFFWWIVGFYWIVSGGDILLHNAPRLYWLXXXXXXXXXXXXX 810
            T NRSS+ KRCES+NTMASF WWIVGFYW+VSGGD LL NAP LYWL             
Sbjct: 768  TSNRSSVIKRCESVNTMASFLWWIVGFYWVVSGGDELLQNAPHLYWLAVVFLAFDVFFAI 827

Query: 811  XCVALACMXXXXXXXXXXXXXXVLYAVAGQEGATESDLSILRKYNYKVFTNGEKSTGGAG 990
             CV LAC+              +LYAVAGQEGA+E+DLSIL KY +++    EK + GAG
Sbjct: 828  FCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFQLTVEEEKPSVGAG 887

Query: 991  RMVPVH---GELADTHVLLPEDAECCICLSSYEDAAELHALPCSHHFHSTCIVKWLKINA 1161
            +MVP+    G LA+  +LLPEDAECCICL  YED AELH LPC+HHFHSTCIVKWLK+NA
Sbjct: 888  KMVPIETSSGYLANERILLPEDAECCICLCPYEDGAELHTLPCNHHFHSTCIVKWLKMNA 947

Query: 1162 SCPLCKYNILKGNDQI 1209
            +CPLCKYNILKGN+Q+
Sbjct: 948  TCPLCKYNILKGNEQV 963



 Score =  124 bits (312), Expect = 6e-26
 Identities = 62/113 (54%), Positives = 73/113 (64%)
 Frame = +1

Query: 100 MAEQQQQTIGSEEGVPLLRPRDVRPXXXXXXXXXXXXXXXXXPSNMVRETAAVQLEERRA 279
           M+     T  SE   PLL PR   P                 PS +VRETAA++LEERRA
Sbjct: 599 MSTTATTTAESESHAPLLHPRQEAPRAASLAMLLGRVTGRRGPSMLVRETAALELEERRA 658

Query: 280 DWGYSKPVVALDIAWNLAFTVVSIVMLSSTLGERPNTPIRVWIGGYALQCVIH 438
           DWGYSKPVVALD+ WN AF VVSI ML  ++ E+PNTPIR+WI GYALQC++H
Sbjct: 659 DWGYSKPVVALDMVWNTAFVVVSITMLILSVKEKPNTPIRIWICGYALQCLVH 711


>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
          Length = 2299

 Score =  256 bits (654), Expect = 1e-65
 Identities = 124/200 (62%), Positives = 146/200 (73%), Gaps = 4/200 (2%)
 Frame = +1

Query: 622  SANTG-NRSSIAKRCESINTMASFFWWIVGFYWIVSGGDILLHNAPRLYWLXXXXXXXXX 798
            SA+ G N+SS+ KRCES+NTMASF WWIVGFYW+VSGG+ LL NAPRLYWL         
Sbjct: 2101 SASGGFNQSSVTKRCESVNTMASFLWWIVGFYWVVSGGEALLQNAPRLYWLAVVFLAFDV 2160

Query: 799  XXXXXCVALACMXXXXXXXXXXXXXXVLYAVAGQEGATESDLSILRKYNYKVFTNGEKST 978
                 CV LAC+              +LYAVAGQEGA+E+DLS+L +Y ++   N EKS 
Sbjct: 2161 FFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPRYRFEA-NNEEKSG 2219

Query: 979  GGAGRMVPVH---GELADTHVLLPEDAECCICLSSYEDAAELHALPCSHHFHSTCIVKWL 1149
             GAG M+P     G LA+  +LLPEDAECCICLSSYED AELHALPC+HHFHSTCI KWL
Sbjct: 2220 VGAGTMIPTETSSGYLANERILLPEDAECCICLSSYEDGAELHALPCNHHFHSTCIAKWL 2279

Query: 1150 KINASCPLCKYNILKGNDQI 1209
            K+NA+CPLCKYNILKG++QI
Sbjct: 2280 KMNATCPLCKYNILKGSEQI 2299



 Score =  114 bits (286), Expect = 6e-23
 Identities = 53/71 (74%), Positives = 61/71 (85%)
 Frame = +1

Query: 226  PSNMVRETAAVQLEERRADWGYSKPVVALDIAWNLAFTVVSIVMLSSTLGERPNTPIRVW 405
            PS +VRETAA +LEERRADWGYSKPVVALD+ WN++F +VSIVML  T  ERPNTPIR+W
Sbjct: 1988 PSMLVRETAARELEERRADWGYSKPVVALDMMWNMSFVIVSIVMLICTARERPNTPIRLW 2047

Query: 406  IGGYALQCVIH 438
            I GYALQC +H
Sbjct: 2048 ICGYALQCGVH 2058


>ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
          Length = 357

 Score =  250 bits (639), Expect = 7e-64
 Identities = 119/199 (59%), Positives = 143/199 (71%), Gaps = 3/199 (1%)
 Frame = +1

Query: 622  SANTGNRSSIAKRCESINTMASFFWWIVGFYWIVSGGDILLHNAPRLYWLXXXXXXXXXX 801
            S NT +RS  AKRCES+NT  SF WWIVGFYW+VSGGDILL +APRLYWL          
Sbjct: 160  SGNT-SRSRFAKRCESLNTGVSFLWWIVGFYWVVSGGDILLQDAPRLYWLAVVFLAFDVF 218

Query: 802  XXXXCVALACMXXXXXXXXXXXXXXVLYAVAGQEGATESDLSILRKYNYKVFTNGEKSTG 981
                CV LAC+              +LYAVAGQEGA+E+DLS+L KY +++ ++ +K +G
Sbjct: 219  FAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPKYKFRILSDVDKPSG 278

Query: 982  GAGRMVPVH---GELADTHVLLPEDAECCICLSSYEDAAELHALPCSHHFHSTCIVKWLK 1152
            GAG MVP+      L +   LL EDAECCICL SYED AELHALPC+HHFHS+CIVKWLK
Sbjct: 279  GAGSMVPIETSSAYLENERTLLLEDAECCICLCSYEDGAELHALPCNHHFHSSCIVKWLK 338

Query: 1153 INASCPLCKYNILKGNDQI 1209
            +NA+CPLCKYNILKGN+Q+
Sbjct: 339  MNATCPLCKYNILKGNEQV 357



 Score =  116 bits (291), Expect = 2e-23
 Identities = 62/114 (54%), Positives = 71/114 (62%), Gaps = 1/114 (0%)
 Frame = +1

Query: 100 MAEQQQQTIGSEEGVPLLRPR-DVRPXXXXXXXXXXXXXXXXXPSNMVRETAAVQLEERR 276
           M+ Q   T   E   PLLR R D                    PS +VRETAA +LEERR
Sbjct: 1   MSSQTAPTEAPEPYTPLLRSRTDAGRGPAPALALLLGRAGRRGPSMLVRETAARELEERR 60

Query: 277 ADWGYSKPVVALDIAWNLAFTVVSIVMLSSTLGERPNTPIRVWIGGYALQCVIH 438
           ADWGYSKPVVALD++WN+AF VVS  ML+ T  E P TPIRVWI GYALQC++H
Sbjct: 61  ADWGYSKPVVALDMSWNMAFVVVSAAMLACTTSEHPTTPIRVWIVGYALQCLVH 114


>ref|XP_003529221.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
          Length = 352

 Score =  248 bits (632), Expect = 4e-63
 Identities = 114/191 (59%), Positives = 138/191 (72%), Gaps = 3/191 (1%)
 Frame = +1

Query: 646  SIAKRCESINTMASFFWWIVGFYWIVSGGDILLHNAPRLYWLXXXXXXXXXXXXXXCVAL 825
            S  KRCE +NT  SF WWIVGFYW+VSGG+ILL +APRLYWL              CV L
Sbjct: 162  SFTKRCELLNTGVSFLWWIVGFYWVVSGGNILLQDAPRLYWLVVVFLAFDVFFAIFCVVL 221

Query: 826  ACMXXXXXXXXXXXXXXVLYAVAGQEGATESDLSILRKYNYKVFTNGEKSTGGAGRMVPV 1005
            AC+              +LYAVAGQEGA+E+DLS+L KY +++ ++ +K +GGAG MVP+
Sbjct: 222  ACLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPKYRFRILSDEDKPSGGAGSMVPI 281

Query: 1006 H---GELADTHVLLPEDAECCICLSSYEDAAELHALPCSHHFHSTCIVKWLKINASCPLC 1176
                  LA+   LLPEDAECCICL SYED AELHALPC+HHFHS+CIVKWLK+NA+CPLC
Sbjct: 282  ETSSAYLANERTLLPEDAECCICLCSYEDGAELHALPCNHHFHSSCIVKWLKMNATCPLC 341

Query: 1177 KYNILKGNDQI 1209
            KYNILKGN+Q+
Sbjct: 342  KYNILKGNEQV 352



 Score =  119 bits (299), Expect = 2e-24
 Identities = 61/103 (59%), Positives = 70/103 (67%), Gaps = 1/103 (0%)
 Frame = +1

Query: 133 EEGVPLLRP-RDVRPXXXXXXXXXXXXXXXXXPSNMVRETAAVQLEERRADWGYSKPVVA 309
           E   PLLRP  D                    PS +VRETAA +LEERRADWGYSKPVVA
Sbjct: 13  ESHAPLLRPLTDASRAPVPTLALLLGRAGRRGPSMLVRETAARELEERRADWGYSKPVVA 72

Query: 310 LDIAWNLAFTVVSIVMLSSTLGERPNTPIRVWIGGYALQCVIH 438
           LD++WN+AF VV+ VML+ T  ERPNTPIRVWI GYALQC++H
Sbjct: 73  LDMSWNMAFVVVTAVMLACTTAERPNTPIRVWIVGYALQCLVH 115


>ref|XP_002314782.1| predicted protein [Populus trichocarpa] gi|222863822|gb|EEF00953.1|
            predicted protein [Populus trichocarpa]
          Length = 295

 Score =  246 bits (629), Expect = 1e-62
 Identities = 120/186 (64%), Positives = 132/186 (70%), Gaps = 4/186 (2%)
 Frame = +1

Query: 655  KRCESINTMASFFWWIVGFYWIVSGGDILLHNAPRLYWLXXXXXXXXXXXXXXCVALACM 834
            KRCES+NTM SF WWIVGFYW+VSGGD LL NAPRLYWL              CV LAC+
Sbjct: 110  KRCESVNTMVSFLWWIVGFYWVVSGGDALLQNAPRLYWLAVVFLAFDVFFAIFCVVLACL 169

Query: 835  XXXXXXXXXXXXXXVLYAVAGQEGATESDLSILRKYNYKVFTNGEKSTG-GAGRMVPVH- 1008
                          +LYAVAGQEGA+E+DLSIL KY Y V  N EK    GAG+MVPV  
Sbjct: 170  IGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYKYLVMGNEEKRPRVGAGKMVPVET 229

Query: 1009 --GELADTHVLLPEDAECCICLSSYEDAAELHALPCSHHFHSTCIVKWLKINASCPLCKY 1182
              G L+   VLLPEDAECCICLS YED AELHALPC+HHFH+ CIVKWLK+NA+CPLCKY
Sbjct: 230  SSGYLSTERVLLPEDAECCICLSPYEDGAELHALPCNHHFHAMCIVKWLKMNATCPLCKY 289

Query: 1183 NILKGN 1200
            NILKGN
Sbjct: 290  NILKGN 295



 Score =  108 bits (269), Expect = 6e-21
 Identities = 51/71 (71%), Positives = 59/71 (83%)
 Frame = +1

Query: 226 PSNMVRETAAVQLEERRADWGYSKPVVALDIAWNLAFTVVSIVMLSSTLGERPNTPIRVW 405
           PS +VRETAA +L+ERRAD GYSKPVVALDI WN AF VVS+ ML  T  ERPNTPIR+W
Sbjct: 13  PSMLVRETAARELDERRADLGYSKPVVALDILWNAAFVVVSVTMLVVTAKERPNTPIRLW 72

Query: 406 IGGYALQCVIH 438
           I GY+LQC++H
Sbjct: 73  ICGYSLQCLVH 83