BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004678
         (1370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135093.1| PREDICTED: 50S ribosomal protein L15, chloro...   167   6e-66
ref|XP_002312401.1| predicted protein [Populus trichocarpa] gi|2...   162   2e-65
ref|XP_002531621.1| 50S ribosomal protein L15, putative [Ricinus...   160   2e-64
ref|XP_002279311.2| PREDICTED: 50S ribosomal protein L15, chloro...   160   1e-62
gb|AFK35360.1| unknown [Lotus japonicus]                              157   1e-62

>ref|XP_004135093.1| PREDICTED: 50S ribosomal protein L15, chloroplastic-like [Cucumis
           sativus] gi|449512847|ref|XP_004164157.1| PREDICTED: 50S
           ribosomal protein L15, chloroplastic-like [Cucumis
           sativus]
          Length = 268

 Score =  167 bits (424), Expect(2) = 6e-66
 Identities = 81/108 (75%), Positives = 88/108 (81%)
 Frame = +2

Query: 425 SISLDASSSVRFRLNNLGPQPGSXXXXXXXXXXXXXXQGGSCGFGMRGQKSRSGPGVRRG 604
           S+S   + +VRFRL+NLGPQPGS              QGGSCGFGMRGQKSRSGPGVR+G
Sbjct: 65  SLSASPAENVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKG 124

Query: 605 FEGGQMPLYRRVPKLRGIAGGMSAGLPKYVPVNLKDIADAGFQEGEEV 748
           FEGGQMPLYRR+PKLRGIAGGM AGLPKYVPVNLKDI +AGFQEGEEV
Sbjct: 125 FEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEV 172



 Score =  111 bits (277), Expect(2) = 6e-66
 Identities = 53/62 (85%), Positives = 60/62 (96%)
 Frame = +3

Query: 867  ILGDGELTVKLNIKARAFSASAKEKLEAVGCALTVLPGRKKWVKPSVAKNIARADEYFAK 1046
            IL DGEL+VKLNIKARAFS++AKEKLEA GC+LTVLPGRKKWVKPSVAKN+ARA+EYFAK
Sbjct: 196  ILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAK 255

Query: 1047 KR 1052
            K+
Sbjct: 256  KK 257


>ref|XP_002312401.1| predicted protein [Populus trichocarpa] gi|222852221|gb|EEE89768.1|
           predicted protein [Populus trichocarpa]
          Length = 256

 Score =  162 bits (409), Expect(2) = 2e-65
 Identities = 87/144 (60%), Positives = 93/144 (64%)
 Frame = +2

Query: 317 KQTSLTFQPLKLHLKQTSKRLFLPLITASSSTTVPGSISLDASSSVRFRLNNLGPQPGSX 496
           K  +  F  L LH K     + +    A S  T         SS  R RL+NLGPQPGS 
Sbjct: 25  KPKTCNFTCLTLHSKNKRPSVVVNQAAAPSVVTT--------SSGARLRLDNLGPQPGSR 76

Query: 497 XXXXXXXXXXXXXQGGSCGFGMRGQKSRSGPGVRRGFEGGQMPLYRRVPKLRGIAGGMSA 676
                        QG SCGFGMRGQKSRSGPGVR+GFEGGQMPLYRR+PKLRGIAGGM A
Sbjct: 77  KKGKRKGRGISAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHA 136

Query: 677 GLPKYVPVNLKDIADAGFQEGEEV 748
           GLPKYVPVNLKDIA AGFQEG EV
Sbjct: 137 GLPKYVPVNLKDIASAGFQEGAEV 160



 Score =  115 bits (288), Expect(2) = 2e-65
 Identities = 55/62 (88%), Positives = 61/62 (98%)
 Frame = +3

Query: 867  ILGDGELTVKLNIKARAFSASAKEKLEAVGCALTVLPGRKKWVKPSVAKNIARADEYFAK 1046
            +LGDGEL+VKLNIKARAFSA+AKEKLEA GC+LTVLPGRKKWVKPSVAKN+ARA+EYFAK
Sbjct: 184  VLGDGELSVKLNIKARAFSAAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAK 243

Query: 1047 KR 1052
            KR
Sbjct: 244  KR 245


>ref|XP_002531621.1| 50S ribosomal protein L15, putative [Ricinus communis]
           gi|223528739|gb|EEF30749.1| 50S ribosomal protein L15,
           putative [Ricinus communis]
          Length = 263

 Score =  160 bits (406), Expect(2) = 2e-64
 Identities = 80/120 (66%), Positives = 89/120 (74%)
 Frame = +2

Query: 389 LITASSSTTVPGSISLDASSSVRFRLNNLGPQPGSXXXXXXXXXXXXXXQGGSCGFGMRG 568
           L+  + + +   +    ASS VRFRL+NLGPQ GS              QG SCGFGMRG
Sbjct: 46  LVVINQARSTAAAAIQSASSGVRFRLDNLGPQRGSRKRGKRKGRGIAAGQGNSCGFGMRG 105

Query: 569 QKSRSGPGVRRGFEGGQMPLYRRVPKLRGIAGGMSAGLPKYVPVNLKDIADAGFQEGEEV 748
           QKSRSGPGVR+GFEGGQMPLYRR+PKLRGIAGGM AGLPK+VPVNLKDI  AGFQEGEEV
Sbjct: 106 QKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKFVPVNLKDIEAAGFQEGEEV 165



 Score =  113 bits (282), Expect(2) = 2e-64
 Identities = 54/62 (87%), Positives = 60/62 (96%)
 Frame = +3

Query: 867  ILGDGELTVKLNIKARAFSASAKEKLEAVGCALTVLPGRKKWVKPSVAKNIARADEYFAK 1046
            ILGDGEL+VK+NIKARAFS SAKEKLEA GC+LTVLPGRKKWVKPSVAKN+ARA+EYFAK
Sbjct: 189  ILGDGELSVKVNIKARAFSTSAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAK 248

Query: 1047 KR 1052
            K+
Sbjct: 249  KK 250


>ref|XP_002279311.2| PREDICTED: 50S ribosomal protein L15, chloroplastic-like [Vitis
           vinifera] gi|297737813|emb|CBI27014.3| unnamed protein
           product [Vitis vinifera]
          Length = 262

 Score =  160 bits (405), Expect(2) = 1e-62
 Identities = 84/144 (58%), Positives = 98/144 (68%)
 Frame = +2

Query: 317 KQTSLTFQPLKLHLKQTSKRLFLPLITASSSTTVPGSISLDASSSVRFRLNNLGPQPGSX 496
           K     F  +KL +K+  ++  + + +  S ++V          +VRFRL+NLGPQPGS 
Sbjct: 34  KANPCQFLTIKLEVKEKVRKSGVVVASQGSPSSVV--------DNVRFRLDNLGPQPGSR 85

Query: 497 XXXXXXXXXXXXXQGGSCGFGMRGQKSRSGPGVRRGFEGGQMPLYRRVPKLRGIAGGMSA 676
                        QG SCGFGMRGQKSRSGPGV +GFEGGQMPLYRR+PKLRGIAGGM A
Sbjct: 86  KKAKRKGRGISAGQGNSCGFGMRGQKSRSGPGVMKGFEGGQMPLYRRIPKLRGIAGGMHA 145

Query: 677 GLPKYVPVNLKDIADAGFQEGEEV 748
           GLPKYVPVNLKDI  AGFQEGEEV
Sbjct: 146 GLPKYVPVNLKDIEAAGFQEGEEV 169



 Score =  107 bits (268), Expect(2) = 1e-62
 Identities = 51/62 (82%), Positives = 59/62 (95%)
 Frame = +3

Query: 867  ILGDGELTVKLNIKARAFSASAKEKLEAVGCALTVLPGRKKWVKPSVAKNIARADEYFAK 1046
            ILG G+L+VKLNIKARAFS+SAKEKLEA GC++TVLPGRKKW+KPSV KN+ARA+EYFAK
Sbjct: 193  ILGAGDLSVKLNIKARAFSSSAKEKLEAAGCSITVLPGRKKWLKPSVIKNLARAEEYFAK 252

Query: 1047 KR 1052
            KR
Sbjct: 253  KR 254


>gb|AFK35360.1| unknown [Lotus japonicus]
          Length = 256

 Score =  157 bits (396), Expect(2) = 1e-62
 Identities = 80/121 (66%), Positives = 89/121 (73%)
 Frame = +2

Query: 386 PLITASSSTTVPGSISLDASSSVRFRLNNLGPQPGSXXXXXXXXXXXXXXQGGSCGFGMR 565
           P +   +S   P S+S   +  VRFRL+NLGPQPGS              QG SCGFGMR
Sbjct: 41  PRVFVVTSAAAPVSVSAP-NVGVRFRLDNLGPQPGSRKKAKRKGRGISAGQGASCGFGMR 99

Query: 566 GQKSRSGPGVRRGFEGGQMPLYRRVPKLRGIAGGMSAGLPKYVPVNLKDIADAGFQEGEE 745
           GQKSRSGPGVRRGFEGGQMPLYRR+PKLRGIAGGMSAGLPKYV VNL+DI  A FQ+G+E
Sbjct: 100 GQKSRSGPGVRRGFEGGQMPLYRRIPKLRGIAGGMSAGLPKYVHVNLRDIEGAKFQDGDE 159

Query: 746 V 748
           V
Sbjct: 160 V 160



 Score =  111 bits (277), Expect(2) = 1e-62
 Identities = 53/62 (85%), Positives = 59/62 (95%)
 Frame = +3

Query: 867  ILGDGELTVKLNIKARAFSASAKEKLEAVGCALTVLPGRKKWVKPSVAKNIARADEYFAK 1046
            ILG+GEL+ KL +KARAFS SAKEKLE++GC+LTVLPGRKKWVKPSVAKNIARADEYFAK
Sbjct: 184  ILGEGELSKKLTVKARAFSTSAKEKLESIGCSLTVLPGRKKWVKPSVAKNIARADEYFAK 243

Query: 1047 KR 1052
            KR
Sbjct: 244  KR 245