BLASTX nr result

ID: Coptis25_contig00004651 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004651
         (2060 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163832.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   888   0.0  
ref|XP_004141878.1| PREDICTED: uncharacterized protein LOC101207...   888   0.0  
ref|XP_002284222.1| PREDICTED: uncharacterized protein LOC100254...   888   0.0  
ref|XP_002533159.1| RNA binding protein, putative [Ricinus commu...   880   0.0  
ref|XP_002304313.1| predicted protein [Populus trichocarpa] gi|2...   864   0.0  

>ref|XP_004163832.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101231265
            [Cucumis sativus]
          Length = 534

 Score =  888 bits (2295), Expect = 0.0
 Identities = 414/504 (82%), Positives = 466/504 (92%), Gaps = 1/504 (0%)
 Frame = -2

Query: 1891 HSKNPISKHSISIP-RIYAVAIDPQEKLPRSSPQRLLKELAERKRAVSPKKKVPPRRFIL 1715
            H  +PI  +  S   R++AVA+DPQ++LP+++PQRLLKELAERKRA SPKKKVPPRRFIL
Sbjct: 31   HPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFIL 90

Query: 1714 KPPLDDARLAQRFLNSPQLSLKSFPLLSSCLPSARLNNADKTWIDEYLLEAKQALGYPLE 1535
            +PPLDD RLA+RFLNSPQL+LKSFPLLSSCLPS+RLNNADKTW+DEYLLEAKQALGYPLE
Sbjct: 91   RPPLDDKRLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLE 150

Query: 1534 PSDTFGDDNPAKQFDTLFYLAFQHPSCERTRTRHVRSGHSRLSFLGEYVLELGLAEYFLQ 1355
            PSD++GDDNPAKQFDTL YLAFQHPSCERT+ RH+RSGHSRL FLG+YVLEL LAEYFLQ
Sbjct: 151  PSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLXFLGQYVLELALAEYFLQ 210

Query: 1354 RYPRESPAPMRERVFGLIGKRNIPKWIKAASLQNLVFPFDDMDRLPRKDREPPAKSVFWA 1175
            RYPRESP PMRERVF LIGKRN+PKWIKAASLQNL+FP+DDMD++ RKDREPP KSVFWA
Sbjct: 211  RYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWA 270

Query: 1174 LFGAIYLCFGMPEVYRVLFEVFGMDPEDESCQPKLRRQLEDVDYVSVEFEGKKLGWQDVS 995
            LFGAIYLCFGMPEVYRVLFEVFGMDP+ + C+P+LRRQLEDVDYVSVEFE K++GWQD+ 
Sbjct: 271  LFGAIYLCFGMPEVYRVLFEVFGMDPDAKECEPRLRRQLEDVDYVSVEFEDKRIGWQDMV 330

Query: 994  VYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYESRPQVMQTLGYPLRMTDRIPEITEA 815
             YKPPEDALFAHPRLFRACVPPGMHRFRGNIWDY+SRPQVMQ LGYPL +TD+IP+ITEA
Sbjct: 331  SYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEA 390

Query: 814  RNIELGLGLQLSFLHPSKHKFEHPRFCNERLEYVGQKIQDLVMAEKLLMKHIDAPGRWLQ 635
            RNIELGLGLQL FLHPSKHKFEHPRFC ERLEY+GQKIQD+VMAE+LLMKH+DAPGRWLQ
Sbjct: 391  RNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQ 450

Query: 634  ERHRRLLLNKFCGKYFRDKNLHRFIIYDEQIQDKYEHNRRLRNPVTTAIQQAIHGLSYTV 455
             +HRRLL+NKFCG+Y R++ LH+ IIY E++QD YE+NRRLRNP TTA+QQA+HGLSY V
Sbjct: 451  VKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVV 510

Query: 454  YGKADVRRLMFEVFDFEQIQPKEV 383
            YGK DVRR+MFEVFDFEQIQPK V
Sbjct: 511  YGKPDVRRIMFEVFDFEQIQPKAV 534


>ref|XP_004141878.1| PREDICTED: uncharacterized protein LOC101207336 [Cucumis sativus]
          Length = 533

 Score =  888 bits (2294), Expect = 0.0
 Identities = 414/504 (82%), Positives = 466/504 (92%), Gaps = 1/504 (0%)
 Frame = -2

Query: 1891 HSKNPISKHSISIP-RIYAVAIDPQEKLPRSSPQRLLKELAERKRAVSPKKKVPPRRFIL 1715
            H  +PI  +  S   R++AVA+DPQ++LP+++PQRLLKELAERKRA SPKKKVPPRRFIL
Sbjct: 30   HPNHPIFPNPSSANLRVFAVAVDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFIL 89

Query: 1714 KPPLDDARLAQRFLNSPQLSLKSFPLLSSCLPSARLNNADKTWIDEYLLEAKQALGYPLE 1535
            +PPLDD RLA+RFLNSPQL+LKSFPLLSSCLPS+RLNNADKTW+DEYLLEAKQALGYPLE
Sbjct: 90   RPPLDDKRLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLE 149

Query: 1534 PSDTFGDDNPAKQFDTLFYLAFQHPSCERTRTRHVRSGHSRLSFLGEYVLELGLAEYFLQ 1355
            PSD++GDDNPAKQFDTL YLAFQHPSCERT+ RH+RSGHSRL FLG+YVLEL LAEYFLQ
Sbjct: 150  PSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLFFLGQYVLELALAEYFLQ 209

Query: 1354 RYPRESPAPMRERVFGLIGKRNIPKWIKAASLQNLVFPFDDMDRLPRKDREPPAKSVFWA 1175
            RYPRESP PMRERVF LIGKRN+PKWIKAASLQNL+FP+DDMD++ RKDREPP KSVFWA
Sbjct: 210  RYPRESPGPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDMDKIIRKDREPPVKSVFWA 269

Query: 1174 LFGAIYLCFGMPEVYRVLFEVFGMDPEDESCQPKLRRQLEDVDYVSVEFEGKKLGWQDVS 995
            LFGAIYLCFGMPEVYRVLFEVFGMDP+ + C+P+LRRQLEDVDYVSVEFE K++GWQD+ 
Sbjct: 270  LFGAIYLCFGMPEVYRVLFEVFGMDPDAKECEPRLRRQLEDVDYVSVEFEDKRIGWQDMV 329

Query: 994  VYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYESRPQVMQTLGYPLRMTDRIPEITEA 815
             YKPPEDALFAHPRLFRACVPPGMHRFRGNIWDY+SRPQVMQ LGYPL +TD+IP+ITEA
Sbjct: 330  SYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPLPVTDKIPDITEA 389

Query: 814  RNIELGLGLQLSFLHPSKHKFEHPRFCNERLEYVGQKIQDLVMAEKLLMKHIDAPGRWLQ 635
            RNIELGLGLQL FLHPSKHKFEHPRFC ERLEY+GQKIQD+VMAE+LLMKH+DAPGRWLQ
Sbjct: 390  RNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGRWLQ 449

Query: 634  ERHRRLLLNKFCGKYFRDKNLHRFIIYDEQIQDKYEHNRRLRNPVTTAIQQAIHGLSYTV 455
             +HRRLL+NKFCG+Y R++ LH+ IIY E++QD YE+NRRLRNP TTA+QQA+HGLSY V
Sbjct: 450  VKHRRLLMNKFCGRYLRERYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVV 509

Query: 454  YGKADVRRLMFEVFDFEQIQPKEV 383
            YGK DVRR+MFEVFDFEQIQPK V
Sbjct: 510  YGKPDVRRIMFEVFDFEQIQPKAV 533


>ref|XP_002284222.1| PREDICTED: uncharacterized protein LOC100254381 [Vitis vinifera]
          Length = 542

 Score =  888 bits (2294), Expect = 0.0
 Identities = 427/506 (84%), Positives = 458/506 (90%), Gaps = 1/506 (0%)
 Frame = -2

Query: 1897 QTHSKNPISKHSISIP-RIYAVAIDPQEKLPRSSPQRLLKELAERKRAVSPKKKVPPRRF 1721
            Q   KN  S +  S+  RI AVA+DP+E LP++SPQRLLKELAERK+  SPKKK PP+RF
Sbjct: 35   QIDLKNSKSTNPTSLKFRILAVAVDPKE-LPQNSPQRLLKELAERKKITSPKKKFPPKRF 93

Query: 1720 ILKPPLDDARLAQRFLNSPQLSLKSFPLLSSCLPSARLNNADKTWIDEYLLEAKQALGYP 1541
            ILKPPLDDARLA+RFLNSPQLSLKSFPLLSSCLPS+RLNNADK WIDEYLLEAKQALGYP
Sbjct: 94   ILKPPLDDARLARRFLNSPQLSLKSFPLLSSCLPSSRLNNADKAWIDEYLLEAKQALGYP 153

Query: 1540 LEPSDTFGDDNPAKQFDTLFYLAFQHPSCERTRTRHVRSGHSRLSFLGEYVLELGLAEYF 1361
            LEPSD +GDDNPAKQFD L YLAFQHPSC+R   RHVRSGHSRL FLG+YVLEL  AEYF
Sbjct: 154  LEPSDQYGDDNPAKQFDALLYLAFQHPSCDRANARHVRSGHSRLWFLGQYVLELAFAEYF 213

Query: 1360 LQRYPRESPAPMRERVFGLIGKRNIPKWIKAASLQNLVFPFDDMDRLPRKDREPPAKSVF 1181
            LQRYPRESPAPMRERVF LIGKRN+P+WIKAASLQNLVFPFDDMDRL RK+REPP KSVF
Sbjct: 214  LQRYPRESPAPMRERVFELIGKRNLPQWIKAASLQNLVFPFDDMDRLIRKEREPPVKSVF 273

Query: 1180 WALFGAIYLCFGMPEVYRVLFEVFGMDPEDESCQPKLRRQLEDVDYVSVEFEGKKLGWQD 1001
            WALFGAIYLC+GMPEVYRVLFEVFGMDPE E CQPKLRRQLEDVDYVSVEFE  KL WQD
Sbjct: 274  WALFGAIYLCYGMPEVYRVLFEVFGMDPEHEDCQPKLRRQLEDVDYVSVEFENNKLSWQD 333

Query: 1000 VSVYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYESRPQVMQTLGYPLRMTDRIPEIT 821
            V+ YKPPEDALFAHPRLFRACVPPGMHRFRGNIWDY+ RPQVM  LGYPL +TDRIP+IT
Sbjct: 334  VAAYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDCRPQVMHALGYPLPVTDRIPDIT 393

Query: 820  EARNIELGLGLQLSFLHPSKHKFEHPRFCNERLEYVGQKIQDLVMAEKLLMKHIDAPGRW 641
            +ARNIELGLGLQL FLHPSKHKFEHPRFC ERLEYVGQKIQD+VMAE+LLMKH+DAPG+W
Sbjct: 394  KARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYVGQKIQDIVMAERLLMKHLDAPGKW 453

Query: 640  LQERHRRLLLNKFCGKYFRDKNLHRFIIYDEQIQDKYEHNRRLRNPVTTAIQQAIHGLSY 461
            LQE+HRRLL+NKFCG+Y RDK LHRFIIY EQ+QD YEHNRRLRNP TTA+QQAIHGLSY
Sbjct: 454  LQEKHRRLLMNKFCGRYLRDKYLHRFIIYSEQVQDSYEHNRRLRNPATTAVQQAIHGLSY 513

Query: 460  TVYGKADVRRLMFEVFDFEQIQPKEV 383
             VYGK DVRRLMFEVFDFEQIQPK V
Sbjct: 514  LVYGKPDVRRLMFEVFDFEQIQPKPV 539


>ref|XP_002533159.1| RNA binding protein, putative [Ricinus communis]
            gi|223527031|gb|EEF29218.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 532

 Score =  880 bits (2274), Expect = 0.0
 Identities = 421/507 (83%), Positives = 461/507 (90%), Gaps = 2/507 (0%)
 Frame = -2

Query: 1897 QTHSKNPISKHSISIPRIYAVAIDPQE--KLPRSSPQRLLKELAERKRAVSPKKKVPPRR 1724
            Q H K PI K   ++ R+ AVAIDP +  +LP++SPQRLLKELAERK+  SPKKKVPP+R
Sbjct: 28   QIHLKKPI-KFPPNL-RVLAVAIDPPQPQELPQNSPQRLLKELAERKKITSPKKKVPPKR 85

Query: 1723 FILKPPLDDARLAQRFLNSPQLSLKSFPLLSSCLPSARLNNADKTWIDEYLLEAKQALGY 1544
            FILKPPLDD +LAQRFLNSPQLSLK FPLLSSCLPS+RLN+ DKTWIDEYLLEAKQALGY
Sbjct: 86   FILKPPLDDKKLAQRFLNSPQLSLKQFPLLSSCLPSSRLNSVDKTWIDEYLLEAKQALGY 145

Query: 1543 PLEPSDTFGDDNPAKQFDTLFYLAFQHPSCERTRTRHVRSGHSRLSFLGEYVLELGLAEY 1364
             LEPSD FGDDNPAKQFDTL YLAFQHPSCERT  RHV+ GHSRL FLG+YVLEL   E+
Sbjct: 146  SLEPSDNFGDDNPAKQFDTLLYLAFQHPSCERTNARHVKYGHSRLCFLGQYVLELAFCEF 205

Query: 1363 FLQRYPRESPAPMRERVFGLIGKRNIPKWIKAASLQNLVFPFDDMDRLPRKDREPPAKSV 1184
            FLQRYPRESPAPMRERVF LIGKRN+PKWIKAASLQNL+FP+DD+D+L RKDREPP KSV
Sbjct: 206  FLQRYPRESPAPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDIDKLLRKDREPPVKSV 265

Query: 1183 FWALFGAIYLCFGMPEVYRVLFEVFGMDPEDESCQPKLRRQLEDVDYVSVEFEGKKLGWQ 1004
            FWALFGAIYLCFGMPEVYRVLFEVFGMDPE E CQPKLRRQLEDVDYVSVEFEG KL WQ
Sbjct: 266  FWALFGAIYLCFGMPEVYRVLFEVFGMDPEAEDCQPKLRRQLEDVDYVSVEFEGNKLSWQ 325

Query: 1003 DVSVYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYESRPQVMQTLGYPLRMTDRIPEI 824
            DV+ YKPPEDALFAHPRLFRACVPPGMHRFRGNIWDY+SRP+VM+TLGYPL M+DRIP+I
Sbjct: 326  DVAAYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPKVMKTLGYPLAMSDRIPDI 385

Query: 823  TEARNIELGLGLQLSFLHPSKHKFEHPRFCNERLEYVGQKIQDLVMAEKLLMKHIDAPGR 644
            TEARNIELGLGLQL FLHPSK+KFEHPRFC ERLE+VGQKIQDLV+AE+LLMKH+DAPG+
Sbjct: 386  TEARNIELGLGLQLCFLHPSKYKFEHPRFCYERLEFVGQKIQDLVLAERLLMKHLDAPGK 445

Query: 643  WLQERHRRLLLNKFCGKYFRDKNLHRFIIYDEQIQDKYEHNRRLRNPVTTAIQQAIHGLS 464
            WLQERHRRLL+NKFCG+Y RDK+LH FI+Y EQ+ D YE+NRRLRNP TTA+QQA+HGLS
Sbjct: 446  WLQERHRRLLMNKFCGRYLRDKHLHHFIVYSEQVIDAYENNRRLRNPATTAVQQALHGLS 505

Query: 463  YTVYGKADVRRLMFEVFDFEQIQPKEV 383
            YTVYGK DVRRLMFEVFDFEQIQPK V
Sbjct: 506  YTVYGKPDVRRLMFEVFDFEQIQPKAV 532


>ref|XP_002304313.1| predicted protein [Populus trichocarpa] gi|222841745|gb|EEE79292.1|
            predicted protein [Populus trichocarpa]
          Length = 535

 Score =  864 bits (2233), Expect = 0.0
 Identities = 406/493 (82%), Positives = 451/493 (91%), Gaps = 5/493 (1%)
 Frame = -2

Query: 1846 IYAVAIDPQEKLPRSSPQRLLKELAERKRAVSPKKKVPPRRFILKPPLDDARLAQRFLNS 1667
            ++AVAIDPQE LP++SPQRLLKELAERK+  SPKK++PP+RFILKPPLDD RLAQRFLNS
Sbjct: 44   VFAVAIDPQE-LPKNSPQRLLKELAERKKTTSPKKRIPPKRFILKPPLDDKRLAQRFLNS 102

Query: 1666 PQLSLKSFPLLSSCLPSARLNNADKTWIDEYLLEAKQALGYPLEPSDTFGDDNPAKQFDT 1487
            PQLSLK FPLLSSCLPS+RLNNAD+TWIDEYLLEAKQALGYPLEPSD FGDDNPAKQFDT
Sbjct: 103  PQLSLKQFPLLSSCLPSSRLNNADQTWIDEYLLEAKQALGYPLEPSDRFGDDNPAKQFDT 162

Query: 1486 LFYLAFQHPSCERTRTRHVRSGHSRLSFLGEYVLELGLAEYFLQRYPRESPAPMRERVFG 1307
            L YLAFQHPSCERT  RHVRSGHSRL FLG+YVLEL  AEYFLQRYPRESPAP+RERVFG
Sbjct: 163  LLYLAFQHPSCERTNARHVRSGHSRLCFLGQYVLELAFAEYFLQRYPRESPAPLRERVFG 222

Query: 1306 LIGKRNIPKWIKAASLQNLVFPFDDMDRLPRKDREPPAKSVFWALFGAIYLCFGMPEVYR 1127
            LIGKRN+PKWIKAASL NL+FP+D+MD+L RK+REPP KSVFWA+FGAIYLCFGMPEVYR
Sbjct: 223  LIGKRNLPKWIKAASLHNLIFPYDNMDKLQRKEREPPVKSVFWAVFGAIYLCFGMPEVYR 282

Query: 1126 VLFEVFGMDPEDESCQPKLRRQLEDVDYVSVEFEGKKLGWQDVSVYK-----PPEDALFA 962
            VLFEVF MDPE E CQPKLRRQ EDVDYVSVEFEGK+L WQDV+ YK     PPEDALFA
Sbjct: 283  VLFEVFEMDPEAEDCQPKLRRQFEDVDYVSVEFEGKQLSWQDVAAYKASSRFPPEDALFA 342

Query: 961  HPRLFRACVPPGMHRFRGNIWDYESRPQVMQTLGYPLRMTDRIPEITEARNIELGLGLQL 782
            HPRLFRACVPPGMHRFRGNIWDYESRP VM+TLGYPL M DRIP+IT+ARNIELGLGLQL
Sbjct: 343  HPRLFRACVPPGMHRFRGNIWDYESRPHVMRTLGYPLTMRDRIPDITKARNIELGLGLQL 402

Query: 781  SFLHPSKHKFEHPRFCNERLEYVGQKIQDLVMAEKLLMKHIDAPGRWLQERHRRLLLNKF 602
             FLHPS +KFEHPRFC ERLEYVGQKIQD+VMAE+LLMKH+DAPG+WLQE+HRR+L+NKF
Sbjct: 403  CFLHPSNYKFEHPRFCYERLEYVGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRVLMNKF 462

Query: 601  CGKYFRDKNLHRFIIYDEQIQDKYEHNRRLRNPVTTAIQQAIHGLSYTVYGKADVRRLMF 422
            CG+Y R+K+LH++I Y +++QD YEHNRRLRNP TTA+  ++HGLSYT+YGK DVRRLMF
Sbjct: 463  CGRYLREKHLHKYITYADKVQDAYEHNRRLRNPSTTAVNHSLHGLSYTIYGKPDVRRLMF 522

Query: 421  EVFDFEQIQPKEV 383
            +VFDFEQ QPK V
Sbjct: 523  DVFDFEQTQPKLV 535


Top