BLASTX nr result

ID: Coptis25_contig00004646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004646
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ34354.1| unnamed protein product [Thellungiella halophila]      71   8e-11
ref|NP_174617.1| protein MOS2 [Arabidopsis thaliana] gi|75169419...    69   5e-10
ref|XP_002276861.1| PREDICTED: protein MOS2-like [Vitis vinifera]      69   5e-10
ref|XP_002522998.1| Protein MOS2, putative [Ricinus communis] gi...    67   2e-09
ref|XP_002893773.1| hypothetical protein ARALYDRAFT_890931 [Arab...    67   2e-09

>dbj|BAJ34354.1| unnamed protein product [Thellungiella halophila]
          Length = 453

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
 Frame = -3

Query: 304 QQFVTEFDPSKPPTLINNNT-LVIPRLENTWNPYKKMKNIDTPLQN-IQDPNLTFELETT 131
           ++FVTEFDPSK  TL ++    VIP +ENTW P+KKMKN+D PLQ+      L FE E  
Sbjct: 31  KEFVTEFDPSK--TLADSTPKYVIPPIENTWRPHKKMKNLDLPLQSGNTGSGLEFEPEVP 88

Query: 130 PALNMDTDPSMSYGLNIRDKNIK 62
              +  +D +++YGLN+R K +K
Sbjct: 89  LGDSKGSDSNITYGLNLRQKVVK 111


>ref|NP_174617.1| protein MOS2 [Arabidopsis thaliana]
           gi|75169419|sp|Q9C801.1|MOS2_ARATH RecName: Full=Protein
           MOS2 gi|12322393|gb|AAG51225.1|AC051630_22 unknown
           protein; 82634-81246 [Arabidopsis thaliana]
           gi|20259490|gb|AAM13865.1| unknown protein [Arabidopsis
           thaliana] gi|29824125|gb|AAP04023.1| unknown protein
           [Arabidopsis thaliana] gi|77176696|gb|ABA64466.1|
           putative nucleic-acid binding protein [Arabidopsis
           thaliana] gi|332193481|gb|AEE31602.1| protein MOS2
           [Arabidopsis thaliana]
          Length = 462

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
 Frame = -3

Query: 304 QQFVTEFDPSKPPTLINN-NTLVIPRLENTWNPYKKMKNIDTPLQN-IQDPNLTFELETT 131
           ++FVTEFDPSK  TL N+    VIP +ENTW P+KKMKN+D PLQ+      L FE E  
Sbjct: 32  KEFVTEFDPSK--TLANSIPKYVIPPIENTWRPHKKMKNLDLPLQSGNAGSGLEFEPE-V 88

Query: 130 PALNMDTDPSMSYGLNIRDK 71
           P    +   ++SYGLN+R K
Sbjct: 89  PLPGTEKPDNISYGLNLRQK 108


>ref|XP_002276861.1| PREDICTED: protein MOS2-like [Vitis vinifera]
          Length = 422

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
 Frame = -3

Query: 307 QQQFVTEFDPSKPPTLINNNTLVIPRLENTWNPYKKMKNIDTPLQN-IQDPNLTFELETT 131
           + ++VTEFD SK         L++P  EN W P KKMKN+D PLQ+  +  ++ FELE++
Sbjct: 30  RHEYVTEFDASKTLADTQTKRLIVPPKENEWRPEKKMKNLDLPLQSTTESTDIRFELESS 89

Query: 130 PALNMDTDPSMSYGLNIRDKN 68
            A   D+  S+SYGLNIR+ +
Sbjct: 90  DAAAGDS--SVSYGLNIRENS 108


>ref|XP_002522998.1| Protein MOS2, putative [Ricinus communis]
           gi|223537810|gb|EEF39428.1| Protein MOS2, putative
           [Ricinus communis]
          Length = 479

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/78 (51%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
 Frame = -3

Query: 304 QQFVTEFDPSKPPTLINNNTLVIPRLENTWNPYKKMKNID-TPLQNIQDPN-LTFELETT 131
           +QFVTEFDPSK  TL   N ++IP  EN W P+KKMKN+   P     DP+ L FE+ T 
Sbjct: 36  KQFVTEFDPSK--TLTKQNRIIIPPKENEWRPHKKMKNLALLPSLQSSDPDALRFEIATD 93

Query: 130 PALNMDTDPSMSYGLNIR 77
              +   D SMSYGLN+R
Sbjct: 94  --ADDGDDKSMSYGLNVR 109


>ref|XP_002893773.1| hypothetical protein ARALYDRAFT_890931 [Arabidopsis lyrata subsp.
           lyrata] gi|297339615|gb|EFH70032.1| hypothetical protein
           ARALYDRAFT_890931 [Arabidopsis lyrata subsp. lyrata]
          Length = 461

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 40/80 (50%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
 Frame = -3

Query: 304 QQFVTEFDPSKPPTLINN-NTLVIPRLENTWNPYKKMKNIDTPLQN-IQDPNLTFELETT 131
           ++FVTEFDPSK  TL N+    VIP +ENTW P+KKMKN+D PLQ+      L FE E  
Sbjct: 31  KEFVTEFDPSK--TLSNSIPKYVIPPIENTWRPHKKMKNLDLPLQSGNTGSGLEFEPE-V 87

Query: 130 PALNMDTDPSMSYGLNIRDK 71
           P    +   +++YGLN+R K
Sbjct: 88  PLPGHERPDNITYGLNLRQK 107


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