BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004635
         (1570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001781989.1| predicted protein [Physcomitrella patens sub...   121   2e-44
ref|XP_001768092.1| predicted protein [Physcomitrella patens sub...   121   2e-44
ref|XP_003599718.1| WD repeat-containing protein, putative [Medi...   115   5e-43
ref|XP_002275116.1| PREDICTED: protein TOPLESS [Vitis vinifera] ...   119   8e-43
ref|XP_003545732.1| PREDICTED: topless-related protein 1-like is...   115   2e-42

>ref|XP_001781989.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162666562|gb|EDQ53213.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 1102

 Score =  121 bits (304), Expect(2) = 2e-44
 Identities = 71/135 (52%), Positives = 84/135 (62%), Gaps = 8/135 (5%)
 Frame = -1

Query: 1570 IDAHIGSVNDLVFSHPNKQLCIVSCGDDKAIKVWDAVTGDRCQAIHEYYV*RS*STCAFC 1391
            IDAH+G VNDL FSHPNKQLC+++CGDDK IKVWDA TG R Q   E +     S C   
Sbjct: 450  IDAHVGGVNDLAFSHPNKQLCVITCGDDKTIKVWDAATG-RKQYTFEGHEAPVYSVCPHH 508

Query: 1390 MASLQ--------GKHRVYLFDCYGWED*SLVV**FGIKS*LRCTRSYSADGTRLFSCGT 1235
              S+Q        GK + +L+D  G    S V   +        T +YSADGTRLFSCGT
Sbjct: 509  KESIQFIFSTAIDGKIKAWLYDLLG----SRVD--YDAPGHWCTTMAYSADGTRLFSCGT 562

Query: 1234 SKDEDSYLVKWNESE 1190
            SKD +SYLV+WNESE
Sbjct: 563  SKDGESYLVEWNESE 577



 Score = 85.9 bits (211), Expect(2) = 2e-44
 Identities = 38/55 (69%), Positives = 46/55 (83%)
 Frame = -3

Query: 1190 GAAMRTYQGFREQSIGVVQFDTTKNHFLAVGDEFVIKIWDMDNPDLMMTIEADGG 1026
            GA  RTY GFR++S GVVQFDTT+N FLA GDEF+IK WDMDN +L+ TI+A+GG
Sbjct: 578  GAIKRTYSGFRKRSAGVVQFDTTRNRFLAAGDEFLIKFWDMDNTNLLTTIDAEGG 632


>ref|XP_001768092.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162680730|gb|EDQ67164.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 1158

 Score =  121 bits (304), Expect(2) = 2e-44
 Identities = 71/135 (52%), Positives = 84/135 (62%), Gaps = 8/135 (5%)
 Frame = -1

Query: 1570 IDAHIGSVNDLVFSHPNKQLCIVSCGDDKAIKVWDAVTGDRCQAIHEYYV*RS*STCAFC 1391
            IDAH+G VNDL FSHPNKQLC+++CGDDK IKVWDA TG R Q   E +     S C   
Sbjct: 453  IDAHVGGVNDLAFSHPNKQLCVITCGDDKTIKVWDAATG-RKQYTFEGHEAPVYSVCPHH 511

Query: 1390 MASLQ--------GKHRVYLFDCYGWED*SLVV**FGIKS*LRCTRSYSADGTRLFSCGT 1235
              S+Q        GK + +L+D  G    S V   +        T +YSADGTRLFSCGT
Sbjct: 512  KESIQFIFSTAIDGKIKAWLYDLLG----SRVD--YDAPGHWCTTMAYSADGTRLFSCGT 565

Query: 1234 SKDEDSYLVKWNESE 1190
            SKD +SYLV+WNESE
Sbjct: 566  SKDGESYLVEWNESE 580



 Score = 85.5 bits (210), Expect(2) = 2e-44
 Identities = 38/55 (69%), Positives = 46/55 (83%)
 Frame = -3

Query: 1190 GAAMRTYQGFREQSIGVVQFDTTKNHFLAVGDEFVIKIWDMDNPDLMMTIEADGG 1026
            GA  RTY GFR++S GVVQFDTT+N FLA GDEF+IK WDMDN +L+ TI+A+GG
Sbjct: 581  GAIKRTYSGFRKRSSGVVQFDTTRNRFLAAGDEFLIKFWDMDNTNLLTTIDAEGG 635


>ref|XP_003599718.1| WD repeat-containing protein, putative [Medicago truncatula]
            gi|357468121|ref|XP_003604345.1| WD repeat-containing
            protein, putative [Medicago truncatula]
            gi|355488766|gb|AES69969.1| WD repeat-containing protein,
            putative [Medicago truncatula]
            gi|355505400|gb|AES86542.1| WD repeat-containing protein,
            putative [Medicago truncatula]
          Length = 1138

 Score =  115 bits (287), Expect(2) = 5e-43
 Identities = 67/135 (49%), Positives = 84/135 (62%), Gaps = 8/135 (5%)
 Frame = -1

Query: 1570 IDAHIGSVNDLVFSHPNKQLCIVSCGDDKAIKVWDAVTGDRCQAIHEYYV*RS*STCAFC 1391
            IDAH+G VNDL FSHPNKQLC+++CGDDK IKVWDAV+G + Q   E +     S C   
Sbjct: 459  IDAHVGGVNDLAFSHPNKQLCVITCGDDKTIKVWDAVSGAK-QYTFEGHEAPVYSVCPHY 517

Query: 1390 MASLQ--------GKHRVYLFDCYGWED*SLVV**FGIKS*LRCTRSYSADGTRLFSCGT 1235
              ++Q        GK + +L+D  G    S V   +        T +YSADGTRLFSCGT
Sbjct: 518  KENIQFIFSTALDGKIKAWLYDNLG----SRVD--YDAPGRWCTTMAYSADGTRLFSCGT 571

Query: 1234 SKDEDSYLVKWNESE 1190
            SKD +S +V+WNESE
Sbjct: 572  SKDGESSIVEWNESE 586



 Score = 87.8 bits (216), Expect(2) = 5e-43
 Identities = 39/55 (70%), Positives = 46/55 (83%)
 Frame = -3

Query: 1190 GAAMRTYQGFREQSIGVVQFDTTKNHFLAVGDEFVIKIWDMDNPDLMMTIEADGG 1026
            GA  RTYQGFR++S+GVVQFDTTKN FLA GD+F IK WDMDN  L+ T++ADGG
Sbjct: 587  GAVKRTYQGFRKRSMGVVQFDTTKNRFLAAGDDFSIKFWDMDNIQLLTTVDADGG 641


>ref|XP_002275116.1| PREDICTED: protein TOPLESS [Vitis vinifera]
            gi|297737353|emb|CBI26554.3| unnamed protein product
            [Vitis vinifera]
          Length = 1135

 Score =  119 bits (297), Expect(2) = 8e-43
 Identities = 71/137 (51%), Positives = 84/137 (61%), Gaps = 10/137 (7%)
 Frame = -1

Query: 1570 IDAHIGSVNDLVFSHPNKQLCIVSCGDDKAIKVWDAVTGDRCQAI--HEYYV*RS*STCA 1397
            IDAHIG VND+ F+HPNKQLCIV+CGDDK IKVWDA TG R      HE  V    S C 
Sbjct: 448  IDAHIGGVNDVAFAHPNKQLCIVTCGDDKTIKVWDAQTGRRLYTFEGHEAPV---YSVCP 504

Query: 1396 FCMASLQ--------GKHRVYLFDCYGWED*SLVV**FGIKS*LRCTRSYSADGTRLFSC 1241
                ++Q        GK + +L+DC G    S V   +          +YSADGTRLFSC
Sbjct: 505  HYKENIQFIFSTAIDGKIKAWLYDCLG----SRVD--YDAPGHWCTMMAYSADGTRLFSC 558

Query: 1240 GTSKDEDSYLVKWNESE 1190
            GTSKD +S+LV+WNESE
Sbjct: 559  GTSKDGESHLVEWNESE 575



 Score = 83.2 bits (204), Expect(2) = 8e-43
 Identities = 36/55 (65%), Positives = 45/55 (81%)
 Frame = -3

Query: 1190 GAAMRTYQGFREQSIGVVQFDTTKNHFLAVGDEFVIKIWDMDNPDLMMTIEADGG 1026
            GA  RTY GFR++S+GVVQFDTT+N FLA GDEF IK WDMDN +++  +EA+GG
Sbjct: 576  GAIKRTYLGFRKRSLGVVQFDTTRNRFLAAGDEFQIKFWDMDNTNILTAVEAEGG 630



 Score = 98.2 bits (243), Expect = 5e-18
 Identities = 55/103 (53%), Positives = 63/103 (61%)
 Frame = -2

Query: 1452 TGAKQYMNIMFEGHEAPVLSVWPHYKENIEFIFSTAMDGKIKAWLYDNLGSRVDYDAPGP 1273
            TG + Y    FEGHEAPV SV PHYKENI+FIFSTA+DGKIKAWLYD LGSRVDYDAPG 
Sbjct: 485  TGRRLYT---FEGHEAPVYSVCPHYKENIQFIFSTAIDGKIKAWLYDCLGSRVDYDAPGH 541

Query: 1272 TVPMGQGFFHVELVKMKILIL*NGMRVRSCHANLSGFS*AIHW 1144
               M             +    +G R+ SC  +  G S  + W
Sbjct: 542  WCTM-------------MAYSADGTRLFSCGTSKDGESHLVEW 571


>ref|XP_003545732.1| PREDICTED: topless-related protein 1-like isoform 2 [Glycine max]
          Length = 1120

 Score =  115 bits (288), Expect(2) = 2e-42
 Identities = 66/129 (51%), Positives = 80/129 (62%), Gaps = 2/129 (1%)
 Frame = -1

Query: 1570 IDAHIGSVNDLVFSHPNKQLCIVSCGDDKAIKVWDAVTGDRCQAI--HEYYV*RS*STCA 1397
            IDAH+G VNDL FSHPNKQLC+++CGDDK IKVWDA TG +      HE  V        
Sbjct: 460  IDAHVGGVNDLAFSHPNKQLCVITCGDDKTIKVWDAATGAKQYTFEGHEAPV-----YSF 514

Query: 1396 FCMASLQGKHRVYLFDCYGWED*SLVV**FGIKS*LRCTRSYSADGTRLFSCGTSKDEDS 1217
                +L GK + +L+D  G    S V   +        T +YSADGTRLFSCGTSKD +S
Sbjct: 515  IFSTALDGKIKAWLYDNLG----SRVD--YEAPGRWCTTMAYSADGTRLFSCGTSKDAES 568

Query: 1216 YLVKWNESE 1190
             +V+WNESE
Sbjct: 569  SIVEWNESE 577



 Score = 85.1 bits (209), Expect(2) = 2e-42
 Identities = 37/55 (67%), Positives = 45/55 (81%)
 Frame = -3

Query: 1190 GAAMRTYQGFREQSIGVVQFDTTKNHFLAVGDEFVIKIWDMDNPDLMMTIEADGG 1026
            GA  RTYQGFR++S+G VQFDTTKN +LA GD+F IK WDMDN  L+ T++ADGG
Sbjct: 578  GAVKRTYQGFRKRSLGFVQFDTTKNRYLAAGDDFSIKFWDMDNIQLLTTVDADGG 632