BLASTX nr result

ID: Coptis25_contig00004607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004607
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318620.1| 5-formyltetrahydrofolate cyclo-ligase [Popul...    58   7e-07
ref|XP_002266146.2| PREDICTED: 5-formyltetrahydrofolate cyclo-li...    54   1e-06
emb|CBI15306.3| unnamed protein product [Vitis vinifera]               54   1e-06
ref|XP_002511485.1| 5-formyltetrahydrofolate cyclo-ligase, putat...    57   2e-06
ref|XP_004155072.1| PREDICTED: 5-formyltetrahydrofolate cyclo-li...    56   3e-06

>ref|XP_002318620.1| 5-formyltetrahydrofolate cyclo-ligase [Populus trichocarpa]
           gi|222859293|gb|EEE96840.1| 5-formyltetrahydrofolate
           cyclo-ligase [Populus trichocarpa]
          Length = 276

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = +1

Query: 1   KKYQELSMERKWKQPLLVALSYNLLILDDGVIPVT 105
           +KYQEL+ ER W+QPLLVALSY+L I+DDG IPVT
Sbjct: 214 RKYQELAEERDWRQPLLVALSYSLQIIDDGAIPVT 248


>ref|XP_002266146.2| PREDICTED: 5-formyltetrahydrofolate cyclo-ligase [Vitis vinifera]
          Length = 273

 Score = 54.3 bits (129), Expect(2) = 1e-06
 Identities = 25/35 (71%), Positives = 29/35 (82%)
 Frame = +1

Query: 1   KKYQELSMERKWKQPLLVALSYNLLILDDGVIPVT 105
           K Y EL  ER WKQPLLVALSY++ I+D+GVIPVT
Sbjct: 212 KNYLELVKERNWKQPLLVALSYSVQIMDEGVIPVT 246



 Score = 23.1 bits (48), Expect(2) = 1e-06
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +2

Query: 119 PNDVPVDAL 145
           PNDVPVDAL
Sbjct: 247 PNDVPVDAL 255


>emb|CBI15306.3| unnamed protein product [Vitis vinifera]
          Length = 242

 Score = 54.3 bits (129), Expect(2) = 1e-06
 Identities = 25/35 (71%), Positives = 29/35 (82%)
 Frame = +1

Query: 1   KKYQELSMERKWKQPLLVALSYNLLILDDGVIPVT 105
           K Y EL  ER WKQPLLVALSY++ I+D+GVIPVT
Sbjct: 181 KNYLELVKERNWKQPLLVALSYSVQIMDEGVIPVT 215



 Score = 23.1 bits (48), Expect(2) = 1e-06
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +2

Query: 119 PNDVPVDAL 145
           PNDVPVDAL
Sbjct: 216 PNDVPVDAL 224


>ref|XP_002511485.1| 5-formyltetrahydrofolate cyclo-ligase, putative [Ricinus communis]
           gi|223550600|gb|EEF52087.1| 5-formyltetrahydrofolate
           cyclo-ligase, putative [Ricinus communis]
          Length = 292

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = +1

Query: 1   KKYQELSMERKWKQPLLVALSYNLLILDDGVIPVT 105
           +KYQEL+ ER WKQPL V LSY+L I+D+GVIPVT
Sbjct: 215 RKYQELARERNWKQPLFVGLSYSLQIMDEGVIPVT 249


>ref|XP_004155072.1| PREDICTED: 5-formyltetrahydrofolate cyclo-ligase-like [Cucumis
           sativus]
          Length = 337

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/35 (68%), Positives = 31/35 (88%)
 Frame = +1

Query: 1   KKYQELSMERKWKQPLLVALSYNLLILDDGVIPVT 105
           KKYQEL+  R WKQPLLVALSY++ I+D+G+IP+T
Sbjct: 275 KKYQELAKARNWKQPLLVALSYSVQIMDEGIIPLT 309


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