BLASTX nr result

ID: Coptis25_contig00004590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004590
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD93873.1| dihydropyrimidinase like protein [Arabidopsis th...   149   2e-34
gb|AAK44096.1|AF370281_1 putative dihydropyrimidinase [Arabidops...   149   2e-34
ref|NP_568258.2| pyrimidine 2 [Arabidopsis thaliana] gi|28194047...   149   2e-34
ref|XP_002313270.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34
ref|XP_002299970.1| predicted protein [Populus trichocarpa] gi|2...   148   5e-34

>dbj|BAD93873.1| dihydropyrimidinase like protein [Arabidopsis thaliana]
          Length = 243

 Score =  149 bits (376), Expect = 2e-34
 Identities = 70/79 (88%), Positives = 78/79 (98%)
 Frame = -2

Query: 237 VTSTECAQIFNIYPRKGAILAGSDADIIIFNPNSSFKISARSHHSRSDTNVYEGRRGKGK 58
           +TSTECA+IFNIYPRKGAILAGSDADIII NPNSS++IS++SHHSRSDTNVYEGRRGKGK
Sbjct: 122 ITSTECARIFNIYPRKGAILAGSDADIIILNPNSSYEISSKSHHSRSDTNVYEGRRGKGK 181

Query: 57  VEVTISGGRIVWENDELKV 1
           VEVTI+GGRIVWEN+ELKV
Sbjct: 182 VEVTIAGGRIVWENEELKV 200


>gb|AAK44096.1|AF370281_1 putative dihydropyrimidinase [Arabidopsis thaliana]
           gi|17104601|gb|AAL34189.1| putative dihydropyrimidinase
           [Arabidopsis thaliana]
          Length = 248

 Score =  149 bits (376), Expect = 2e-34
 Identities = 70/79 (88%), Positives = 78/79 (98%)
 Frame = -2

Query: 237 VTSTECAQIFNIYPRKGAILAGSDADIIIFNPNSSFKISARSHHSRSDTNVYEGRRGKGK 58
           +TSTECA+IFNIYPRKGAILAGSDADIII NPNSS++IS++SHHSRSDTNVYEGRRGKGK
Sbjct: 127 ITSTECARIFNIYPRKGAILAGSDADIIILNPNSSYEISSKSHHSRSDTNVYEGRRGKGK 186

Query: 57  VEVTISGGRIVWENDELKV 1
           VEVTI+GGRIVWEN+ELKV
Sbjct: 187 VEVTIAGGRIVWENEELKV 205


>ref|NP_568258.2| pyrimidine 2 [Arabidopsis thaliana]
           gi|28194047|gb|AAO33381.1|AF465755_1 dihydropyrimidine
           amidohydrolase [Arabidopsis thaliana]
           gi|9759387|dbj|BAB10038.1| dihydropyrimidinase
           [Arabidopsis thaliana] gi|332004390|gb|AED91773.1|
           pyrimidine 2 [Arabidopsis thaliana]
          Length = 531

 Score =  149 bits (376), Expect = 2e-34
 Identities = 70/79 (88%), Positives = 78/79 (98%)
 Frame = -2

Query: 237 VTSTECAQIFNIYPRKGAILAGSDADIIIFNPNSSFKISARSHHSRSDTNVYEGRRGKGK 58
           +TSTECA+IFNIYPRKGAILAGSDADIII NPNSS++IS++SHHSRSDTNVYEGRRGKGK
Sbjct: 410 ITSTECARIFNIYPRKGAILAGSDADIIILNPNSSYEISSKSHHSRSDTNVYEGRRGKGK 469

Query: 57  VEVTISGGRIVWENDELKV 1
           VEVTI+GGRIVWEN+ELKV
Sbjct: 470 VEVTIAGGRIVWENEELKV 488


>ref|XP_002313270.1| predicted protein [Populus trichocarpa] gi|222849678|gb|EEE87225.1|
           predicted protein [Populus trichocarpa]
          Length = 531

 Score =  149 bits (375), Expect = 3e-34
 Identities = 69/79 (87%), Positives = 78/79 (98%)
 Frame = -2

Query: 237 VTSTECAQIFNIYPRKGAILAGSDADIIIFNPNSSFKISARSHHSRSDTNVYEGRRGKGK 58
           VTSTECA++FNIYPRKGAI+AGSDADIII NPNSSF+I+ARSHHSR+DTNVYEGRRGKGK
Sbjct: 411 VTSTECARVFNIYPRKGAIIAGSDADIIILNPNSSFEINARSHHSRTDTNVYEGRRGKGK 470

Query: 57  VEVTISGGRIVWENDELKV 1
           VEVTI+GGR+VWEN+ELKV
Sbjct: 471 VEVTIAGGRVVWENNELKV 489


>ref|XP_002299970.1| predicted protein [Populus trichocarpa] gi|222847228|gb|EEE84775.1|
           predicted protein [Populus trichocarpa]
          Length = 506

 Score =  148 bits (373), Expect = 5e-34
 Identities = 69/79 (87%), Positives = 78/79 (98%)
 Frame = -2

Query: 237 VTSTECAQIFNIYPRKGAILAGSDADIIIFNPNSSFKISARSHHSRSDTNVYEGRRGKGK 58
           VTSTECA+IFNIYPRKGAI+AGSDADIII NPNS+F+I+ARSHHSR+DTNVYEGRRGKGK
Sbjct: 386 VTSTECARIFNIYPRKGAIIAGSDADIIILNPNSTFEINARSHHSRTDTNVYEGRRGKGK 445

Query: 57  VEVTISGGRIVWENDELKV 1
           VEVTI+GGR+VWEN+ELKV
Sbjct: 446 VEVTIAGGRVVWENNELKV 464


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