BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004543
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528761.1| isocitrate dehydrogenase, putative [Ricinus ...   166   2e-39
emb|CAA74776.1| NAD-dependent isocitrate dehydrogenase [Nicotian...   158   4e-37
ref|XP_002265376.2| PREDICTED: isocitrate dehydrogenase [NAD] re...   158   5e-37
ref|XP_004134829.1| PREDICTED: isocitrate dehydrogenase [NAD] re...   156   1e-36
ref|XP_004158894.1| PREDICTED: LOW QUALITY PROTEIN: isocitrate d...   154   7e-36

>ref|XP_002528761.1| isocitrate dehydrogenase, putative [Ricinus communis]
           gi|223531764|gb|EEF33583.1| isocitrate dehydrogenase,
           putative [Ricinus communis]
          Length = 372

 Score =  166 bits (419), Expect = 2e-39
 Identities = 79/102 (77%), Positives = 90/102 (88%)
 Frame = -1

Query: 306 MARRTLPILKQLLNSTKTHTPISHILATRSVTYMPRPGDGTPRAVTLIPGDGIGPLVTGA 127
           MARR++PILK+LL+S+   +  S +++ RSVTYMPRPGDG PR VTLIPGDGIGPLVTGA
Sbjct: 1   MARRSIPILKKLLSSSNNESTCSRLVSRRSVTYMPRPGDGAPRGVTLIPGDGIGPLVTGA 60

Query: 126 VEQVMEAMHAPVYFERYEVHGDMVKVPQEVLDSIMKNKVCLK 1
           VEQVMEAMHAPVYFERYEVHGDM KVP EV++SI KNKVCLK
Sbjct: 61  VEQVMEAMHAPVYFERYEVHGDMKKVPAEVIESIKKNKVCLK 102


>emb|CAA74776.1| NAD-dependent isocitrate dehydrogenase [Nicotiana tabacum]
          Length = 371

 Score =  158 bits (400), Expect = 4e-37
 Identities = 78/102 (76%), Positives = 89/102 (87%)
 Frame = -1

Query: 306 MARRTLPILKQLLNSTKTHTPISHILATRSVTYMPRPGDGTPRAVTLIPGDGIGPLVTGA 127
           MA+RTLP+L+ LL+S  +H     + +TRSVTYMPRPGDGTPRAVTLIPGDGIGPLVTGA
Sbjct: 1   MAKRTLPLLRHLLSSP-SHGFSHSLTSTRSVTYMPRPGDGTPRAVTLIPGDGIGPLVTGA 59

Query: 126 VEQVMEAMHAPVYFERYEVHGDMVKVPQEVLDSIMKNKVCLK 1
           VEQVM+AMHAPVYFERY+VHGDM  VP EV++SI KNKVCLK
Sbjct: 60  VEQVMDAMHAPVYFERYDVHGDMKSVPPEVMESIRKNKVCLK 101


>ref|XP_002265376.2| PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1,
           mitochondrial-like [Vitis vinifera]
          Length = 375

 Score =  158 bits (399), Expect = 5e-37
 Identities = 80/105 (76%), Positives = 87/105 (82%), Gaps = 3/105 (2%)
 Frame = -1

Query: 306 MARRTLPILKQLLNSTKTHTPI---SHILATRSVTYMPRPGDGTPRAVTLIPGDGIGPLV 136
           MA RTLPILKQLL+ + ++      S     RSVTYMPRPGDG PR VTLIPGDGIGPLV
Sbjct: 1   MAPRTLPILKQLLSKSSSYNTNFIGSRFAPKRSVTYMPRPGDGAPRPVTLIPGDGIGPLV 60

Query: 135 TGAVEQVMEAMHAPVYFERYEVHGDMVKVPQEVLDSIMKNKVCLK 1
           TGAVEQVM+AMHAPVYFERYEVHGDM KVP+EVL+SI KNKVCLK
Sbjct: 61  TGAVEQVMDAMHAPVYFERYEVHGDMKKVPEEVLESIRKNKVCLK 105


>ref|XP_004134829.1| PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1,
           mitochondrial-like [Cucumis sativus]
          Length = 381

 Score =  156 bits (395), Expect = 1e-36
 Identities = 81/111 (72%), Positives = 91/111 (81%), Gaps = 9/111 (8%)
 Frame = -1

Query: 306 MARRTLPILKQLLN-STKTHTPI--------SHILATRSVTYMPRPGDGTPRAVTLIPGD 154
           MARR+LPILKQLL+ S+ +  P         S    +RSVTYMPRPGDG PRAVTLIPGD
Sbjct: 1   MARRSLPILKQLLSKSSSSENPALLSSCFKSSIDAQSRSVTYMPRPGDGAPRAVTLIPGD 60

Query: 153 GIGPLVTGAVEQVMEAMHAPVYFERYEVHGDMVKVPQEVLDSIMKNKVCLK 1
           GIGPLVTGAVEQVM+AMHAPVYFE++E+HGDM KVPQEV+DSI KNKVCLK
Sbjct: 61  GIGPLVTGAVEQVMDAMHAPVYFEKFEIHGDMKKVPQEVIDSIKKNKVCLK 111


>ref|XP_004158894.1| PREDICTED: LOW QUALITY PROTEIN: isocitrate dehydrogenase [NAD]
           regulatory subunit 1, mitochondrial-like [Cucumis
           sativus]
          Length = 272

 Score =  154 bits (389), Expect = 7e-36
 Identities = 80/111 (72%), Positives = 90/111 (81%), Gaps = 9/111 (8%)
 Frame = -1

Query: 306 MARRTLPILKQLLN-STKTHTPI--------SHILATRSVTYMPRPGDGTPRAVTLIPGD 154
           MARR+LPILKQLL+ S+ +  P         S    +RSVTYMPRPGDG PRAVTLIPGD
Sbjct: 1   MARRSLPILKQLLSKSSSSENPALLSSCFKSSIDAQSRSVTYMPRPGDGAPRAVTLIPGD 60

Query: 153 GIGPLVTGAVEQVMEAMHAPVYFERYEVHGDMVKVPQEVLDSIMKNKVCLK 1
           GIGPLVTGAVEQVM+AMHAPVYFE++E+HGDM KVPQEV+DSI  NKVCLK
Sbjct: 61  GIGPLVTGAVEQVMDAMHAPVYFEKFEIHGDMKKVPQEVIDSIKXNKVCLK 111