BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004523
         (1120 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   239   1e-60
emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera]   239   1e-60
ref|XP_002329726.1| predicted protein [Populus trichocarpa] gi|1...   232   1e-58
gb|ACT21194.1| zinc finger protein [Carica papaya]                    223   5e-56
ref|XP_002317728.1| predicted protein [Populus trichocarpa] gi|2...   216   6e-54

>ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Vitis
            vinifera] gi|359491811|ref|XP_003634328.1| PREDICTED: E3
            ubiquitin-protein ligase RING1 isoform 2 [Vitis vinifera]
          Length = 369

 Score =  239 bits (609), Expect = 1e-60
 Identities = 131/281 (46%), Positives = 155/281 (55%), Gaps = 3/281 (1%)
 Frame = +3

Query: 285  FNPVMFLQNYLQSLRAGGANIQFVFENNASDXXXXXXXXXXXXXXXXXDYFIGPGLEQLI 464
            F+P  FLQNYLQ+LRAGG N+QFV + N+ +                 DYFIGPGLEQLI
Sbjct: 124  FHPFAFLQNYLQTLRAGGTNVQFVIDGNSPEGTFRLSPNLG-------DYFIGPGLEQLI 176

Query: 465  QQLAENDPNRYGTPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKSAVQGLPDVK 644
            QQLAENDPNRYGTPP                                A+KSA++GLP ++
Sbjct: 177  QQLAENDPNRYGTPP--------------------------------ASKSAIEGLPTIR 204

Query: 645  IDDHLLKSDSSQCAVCKDEFELGMDAKLMPCKHIYHPDCILPWLELHNSCPVCRYELPTD 824
            I   LL +DSSQCAVCKD FEL  +AK MPCKHIYH DCILPWLELHNSCPVCRYELP  
Sbjct: 205  ITVELLGTDSSQCAVCKDSFELDEEAKQMPCKHIYHNDCILPWLELHNSCPVCRYELP-- 262

Query: 825  DPXXXXXXXXXXXXXXXXXXXXXXLPTDDPDYENRPANEEASTQNRSGLTVS---LGDSG 995
                                      TDDPDYE+R    + +    +   V+      + 
Sbjct: 263  --------------------------TDDPDYEHRTRGGQVNQTGGNAAAVAAAGAASNS 296

Query: 996  GEDSAGGVAAMQEDLASPSPRTAERRFRISFPWPFSVFGAP 1118
               +AGG A   E+    +PRTA+R FRISFPWPF  FG+P
Sbjct: 297  ASGAAGGAAVSGENPNPQTPRTADRMFRISFPWPFRTFGSP 337


>emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera]
          Length = 371

 Score =  239 bits (609), Expect = 1e-60
 Identities = 131/281 (46%), Positives = 155/281 (55%), Gaps = 3/281 (1%)
 Frame = +3

Query: 285  FNPVMFLQNYLQSLRAGGANIQFVFENNASDXXXXXXXXXXXXXXXXXDYFIGPGLEQLI 464
            F+P  FLQNYLQ+LRAGG N+QFV + N+ +                 DYFIGPGLEQLI
Sbjct: 126  FHPFAFLQNYLQTLRAGGTNVQFVIDGNSPEGTFRLSPNLG-------DYFIGPGLEQLI 178

Query: 465  QQLAENDPNRYGTPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKSAVQGLPDVK 644
            QQLAENDPNRYGTPP                                A+KSA++GLP ++
Sbjct: 179  QQLAENDPNRYGTPP--------------------------------ASKSAIEGLPTIR 206

Query: 645  IDDHLLKSDSSQCAVCKDEFELGMDAKLMPCKHIYHPDCILPWLELHNSCPVCRYELPTD 824
            I   LL +DSSQCAVCKD FEL  +AK MPCKHIYH DCILPWLELHNSCPVCRYELP  
Sbjct: 207  ITVELLGTDSSQCAVCKDSFELDEEAKQMPCKHIYHNDCILPWLELHNSCPVCRYELP-- 264

Query: 825  DPXXXXXXXXXXXXXXXXXXXXXXLPTDDPDYENRPANEEASTQNRSGLTVS---LGDSG 995
                                      TDDPDYE+R    + +    +   V+      + 
Sbjct: 265  --------------------------TDDPDYEHRTRGGQVNQTGGNAAAVAAAGAASNS 298

Query: 996  GEDSAGGVAAMQEDLASPSPRTAERRFRISFPWPFSVFGAP 1118
               +AGG A   E+    +PRTA+R FRISFPWPF  FG+P
Sbjct: 299  ASGAAGGAAVSGENPNPQTPRTADRMFRISFPWPFRTFGSP 339


>ref|XP_002329726.1| predicted protein [Populus trichocarpa] gi|118486397|gb|ABK95038.1|
            unknown [Populus trichocarpa] gi|222870634|gb|EEF07765.1|
            predicted protein [Populus trichocarpa]
          Length = 345

 Score =  232 bits (591), Expect = 1e-58
 Identities = 135/274 (49%), Positives = 154/274 (56%), Gaps = 1/274 (0%)
 Frame = +3

Query: 285  FNPVMFLQNYLQSLRAGGANIQFVFENNASDXXXXXXXXXXXXXXXXXDYFIGPGLEQLI 464
            FNP +FLQNYLQ++RAGGANIQFV ENN                    DYFIGPGLEQLI
Sbjct: 102  FNPFVFLQNYLQTMRAGGANIQFVIENNPG--MGGMDPTGFRVPANLGDYFIGPGLEQLI 159

Query: 465  QQLAENDPNRYGTPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKSAVQGLPDVK 644
            QQLAENDPNRYGTPP                                AAKSAV+ LPDVK
Sbjct: 160  QQLAENDPNRYGTPP--------------------------------AAKSAVENLPDVK 187

Query: 645  IDDHLLKSDSSQCAVCKDEFELGMDAKLMPCKHIYHPDCILPWLELHNSCPVCRYELPTD 824
            + + L++SDSSQCAVCKD FELG  AK +PCKHIYH DCI+PWLELHNSCPVCRYEL   
Sbjct: 188  VTEELMQSDSSQCAVCKDSFELGEVAKQIPCKHIYHKDCIMPWLELHNSCPVCRYEL--- 244

Query: 825  DPXXXXXXXXXXXXXXXXXXXXXXLPTDDPDYENRPANEEASTQNRSGLTVSLGDSGGED 1004
                                     PTDD DYE R  N        +G+  ++G  GG +
Sbjct: 245  -------------------------PTDDQDYEQRKGN------GSNGVNQNVG--GGIN 271

Query: 1005 SAGGVA-AMQEDLASPSPRTAERRFRISFPWPFS 1103
            S G ++     D  + +PR  ERRFRI FPWPFS
Sbjct: 272  SGGSISDGDNSDGNAQTPR--ERRFRIPFPWPFS 303


>gb|ACT21194.1| zinc finger protein [Carica papaya]
          Length = 340

 Score =  223 bits (569), Expect = 5e-56
 Identities = 130/283 (45%), Positives = 149/283 (52%), Gaps = 6/283 (2%)
 Frame = +3

Query: 285  FNPVMFLQNYLQSLRAGGANIQFVFENNASDXXXXXXXXXXXXXXXXXDYFIGPGLEQLI 464
            FNP +FLQNYLQ+LRA GANIQFV ENN+                   DYF+GPGLEQLI
Sbjct: 99   FNPFLFLQNYLQTLRANGANIQFVIENNSPGGSGPSGAFRLPGSLNLGDYFLGPGLEQLI 158

Query: 465  QQLAENDPNRYGTPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKSAVQGLPDVK 644
            QQLAENDPNR+GTPP                                A+KSA++ LP +K
Sbjct: 159  QQLAENDPNRHGTPP--------------------------------ASKSAIEALPTIK 186

Query: 645  IDDHLLKSDSSQCAVCKDEFELGMDAKLMPCKHIYHPDCILPWLELHNSCPVCRYELPTD 824
            I   +  SDSSQCAVCKD F L  +AK MPCKHIYH  CILPWLELHNSCPVCRYEL   
Sbjct: 187  IFQEMPDSDSSQCAVCKDSFALAEEAKQMPCKHIYHSQCILPWLELHNSCPVCRYEL--- 243

Query: 825  DPXXXXXXXXXXXXXXXXXXXXXXLPTDDPDYENRPANEEASTQNRSGLT-----VSLGD 989
                                     PTDD DYE+R        QN SG T     V+ G+
Sbjct: 244  -------------------------PTDDADYEHRTRANRTPAQNVSGSTDAVNAVADGN 278

Query: 990  SGGEDSAGGVAAMQEDLASPSPRTAERRFRISFPWPF-SVFGA 1115
            +G  D+              +PR+ ERRFRI  PWPF S FG+
Sbjct: 279  AGNRDN------------PETPRSVERRFRIFLPWPFRSSFGS 309


>ref|XP_002317728.1| predicted protein [Populus trichocarpa] gi|222858401|gb|EEE95948.1|
            predicted protein [Populus trichocarpa]
          Length = 323

 Score =  216 bits (551), Expect = 6e-54
 Identities = 126/273 (46%), Positives = 140/273 (51%)
 Frame = +3

Query: 285  FNPVMFLQNYLQSLRAGGANIQFVFENNASDXXXXXXXXXXXXXXXXXDYFIGPGLEQLI 464
            FNP  FLQNYLQ++RAGGANIQFV ENN+                   DYFIGPGLEQLI
Sbjct: 103  FNPFAFLQNYLQTMRAGGANIQFVIENNSG--MGGMDTTGFRLPANLGDYFIGPGLEQLI 160

Query: 465  QQLAENDPNRYGTPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKSAVQGLPDVK 644
            QQLAENDPNRYGTPP                                A+KSAV+ LPD+K
Sbjct: 161  QQLAENDPNRYGTPP--------------------------------ASKSAVENLPDIK 188

Query: 645  IDDHLLKSDSSQCAVCKDEFELGMDAKLMPCKHIYHPDCILPWLELHNSCPVCRYELPTD 824
            +   LL+SDSSQCAVCKD FELG +AK +PCKHIYH DCI PWLELHNSCPVCRYELP  
Sbjct: 189  VTKELLESDSSQCAVCKDSFELGEEAKQIPCKHIYHKDCITPWLELHNSCPVCRYELP-- 246

Query: 825  DPXXXXXXXXXXXXXXXXXXXXXXLPTDDPDYENRPANEEASTQNRSGLTVSLGDSGGED 1004
                                      TDDPDYE R  N                      
Sbjct: 247  --------------------------TDDPDYEQRKGN---------------------- 258

Query: 1005 SAGGVAAMQEDLASPSPRTAERRFRISFPWPFS 1103
                      D+ +P     +RRFRI+F WPFS
Sbjct: 259  --------GNDVVTP----RDRRFRIAFQWPFS 279