BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004501
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328356.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31
ref|XP_002328355.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
ref|XP_002328376.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
ref|XP_003620118.1| Pentatricopeptide repeat protein-like protei...   127   7e-28
ref|XP_002328386.1| predicted protein [Populus trichocarpa] gi|2...   127   9e-28

>ref|XP_002328356.1| predicted protein [Populus trichocarpa] gi|222838071|gb|EEE76436.1|
           predicted protein [Populus trichocarpa]
          Length = 613

 Score =  139 bits (349), Expect = 3e-31
 Identities = 65/130 (50%), Positives = 89/130 (68%)
 Frame = -2

Query: 390 ALCKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILP 211
           +LCK    NDA + L  M +RGI P+VFTYN+++ G    G+  +A RLF EM GR ++P
Sbjct: 242 SLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMP 301

Query: 210 DGHTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVF 31
           +  T+ I++D  CK+GMV EA  +F+TM E+G E D  TYN+LMDGYCLQ  M EAK VF
Sbjct: 302 NTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVF 361

Query: 30  DLMVARGHGP 1
           ++M+ +G  P
Sbjct: 362 EIMIRKGCAP 371



 Score =  100 bits (250), Expect = 9e-20
 Identities = 49/125 (39%), Positives = 74/125 (59%)
 Frame = -2

Query: 387 LCKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPD 208
           LC +GK  +A +L   M +RG  P+V +Y  +I+GL  +G    A+ +F +M   G  P+
Sbjct: 173 LCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPN 232

Query: 207 GHTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFD 28
             TY  IID+ CKD +V++A E    M+ERG   +  TYNS++ G+C  G++ EA  +F 
Sbjct: 233 VVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFK 292

Query: 27  LMVAR 13
            MV R
Sbjct: 293 EMVGR 297



 Score =  100 bits (249), Expect = 1e-19
 Identities = 50/129 (38%), Positives = 75/129 (58%)
 Frame = -2

Query: 387 LCKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPD 208
           LCK+G  ++A  + + M+++G+ PD+ TYNAL+DG        +A ++F  M  +G  P 
Sbjct: 313 LCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPG 372

Query: 207 GHTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFD 28
            H+Y I+I+  CK   +DEA  L   M  +    DTVTY++LM G C  GR KEA ++F 
Sbjct: 373 AHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFK 432

Query: 27  LMVARGHGP 1
            M + G  P
Sbjct: 433 EMCSYGPHP 441



 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 47/128 (36%), Positives = 74/128 (57%)
 Frame = -2

Query: 384 CKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPDG 205
           CK  + ++A  LL  M  + +NPD  TY+ L+ GL   G+ K+A+ LF EM   G  P+ 
Sbjct: 384 CKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNL 443

Query: 204 HTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFDL 25
            TY I++D  CK G +DEA +L ++M E+  E + V Y  L++G  + G+++ AK +F  
Sbjct: 444 VTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSK 503

Query: 24  MVARGHGP 1
           +   G  P
Sbjct: 504 LFGDGTRP 511



 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 40/124 (32%), Positives = 72/124 (58%)
 Frame = -2

Query: 384 CKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPDG 205
           CK G  ++A  LL+ M ++ + P++  Y  LI+G++ +GK + A  LF+++ G G  PD 
Sbjct: 454 CKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDI 513

Query: 204 HTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFDL 25
            TY ++I    K+G+ DEA++LF+ M + G   ++ +YN ++ G+        A  + D 
Sbjct: 514 RTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDE 573

Query: 24  MVAR 13
           MV +
Sbjct: 574 MVGK 577



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 36/130 (27%), Positives = 63/130 (48%)
 Frame = -2

Query: 390 ALCKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILP 211
           +  K+ + +    L   M    +  +V++ N LI+ L        ++ +  +M   GI P
Sbjct: 102 SFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHP 161

Query: 210 DGHTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVF 31
           D  T+  +I+  C +G + EA ELF  M++RG E + ++Y ++++G C  G    A  VF
Sbjct: 162 DAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVF 221

Query: 30  DLMVARGHGP 1
             M   G  P
Sbjct: 222 KKMEQNGCKP 231



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/122 (26%), Positives = 59/122 (48%)
 Frame = -2

Query: 366 NDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPDGHTYGII 187
           +DA      M +    P V  +   +       +    + L N+M    +  + ++  I+
Sbjct: 75  DDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNIL 134

Query: 186 IDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFDLMVARGH 7
           I+  C+   VD +  +   M + G   D +T+N+L++G C +G++KEA  +F+ MV RGH
Sbjct: 135 INCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGH 194

Query: 6   GP 1
            P
Sbjct: 195 EP 196


>ref|XP_002328355.1| predicted protein [Populus trichocarpa] gi|222838070|gb|EEE76435.1|
           predicted protein [Populus trichocarpa]
          Length = 608

 Score =  135 bits (340), Expect = 3e-30
 Identities = 65/130 (50%), Positives = 86/130 (66%)
 Frame = -2

Query: 390 ALCKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILP 211
           +LCK    NDA + L  M  RGI P+VFTYN ++ G    G+  +A RLF EM GR ++P
Sbjct: 237 SLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMP 296

Query: 210 DGHTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVF 31
           D  T  I++D  CK+GMV EA  +F+TM E+G E +  TYN+LMDGYCLQ  M EAK VF
Sbjct: 297 DTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVF 356

Query: 30  DLMVARGHGP 1
           ++M+ +G  P
Sbjct: 357 EIMIRQGCAP 366



 Score =  103 bits (258), Expect = 1e-20
 Identities = 49/125 (39%), Positives = 75/125 (60%)
 Frame = -2

Query: 387 LCKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPD 208
           LC +GK  +A +L   M +RG  P+V +YN +I+GL  +G    A+ +F +M   G  PD
Sbjct: 168 LCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPD 227

Query: 207 GHTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFD 28
             TY  IID+ CKD +V++A E    M++RG   +  TYN ++ G+C+ G++ EA  +F 
Sbjct: 228 VVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFK 287

Query: 27  LMVAR 13
            MV R
Sbjct: 288 EMVGR 292



 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 48/126 (38%), Positives = 74/126 (58%)
 Frame = -2

Query: 387 LCKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPD 208
           LCK+G  ++A  + + M+++G+ P++ TYNAL+DG        +A ++F  M  +G  P 
Sbjct: 308 LCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPG 367

Query: 207 GHTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFD 28
            H+Y I+I+  CK   +DEA  L   M  +    DTVTY++LM G C  GR KEA ++F 
Sbjct: 368 VHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFK 427

Query: 27  LMVARG 10
            M + G
Sbjct: 428 EMCSYG 433



 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/128 (36%), Positives = 77/128 (60%)
 Frame = -2

Query: 384 CKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPDG 205
           CK  + ++A  LL  M  + +NPD  TY+ L+ GL   G+ K+A+ +F EM   G+LP+ 
Sbjct: 379 CKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNL 438

Query: 204 HTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFDL 25
            TY I++D  CK G +DEA +L ++M E+  E + V +  L++G  + G+++ AK +F  
Sbjct: 439 VTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSK 498

Query: 24  MVARGHGP 1
           + A G  P
Sbjct: 499 LFADGIRP 506



 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 49/129 (37%), Positives = 72/129 (55%)
 Frame = -2

Query: 387 LCKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPD 208
           LC+    + A  +L  M + GI+P   T+NALI+GL   GK K+A+ LFNEM  RG  P+
Sbjct: 133 LCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPN 192

Query: 207 GHTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFD 28
             +Y  II+  CK G    A ++F+ M + G + D VTYN+++D  C    + +A     
Sbjct: 193 VISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLS 252

Query: 27  LMVARGHGP 1
            M+ RG  P
Sbjct: 253 EMLDRGIPP 261



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 38/124 (30%), Positives = 71/124 (57%)
 Frame = -2

Query: 384 CKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPDG 205
           CK G  ++A  LL+ M ++ + P++  +  LI+G++ +GK + A  LF+++   GI P  
Sbjct: 449 CKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTI 508

Query: 204 HTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFDL 25
            TY ++I    K+G+ DEA++LF+ M + G   ++ +YN ++ G+        A  + D 
Sbjct: 509 RTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDE 568

Query: 24  MVAR 13
           MV +
Sbjct: 569 MVGK 572



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/130 (29%), Positives = 63/130 (48%)
 Frame = -2

Query: 390 ALCKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILP 211
           +  K+ + +    L   M   G+  +V++ N LI+ L        A+ +  +M   GI P
Sbjct: 97  SFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHP 156

Query: 210 DGHTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVF 31
              T+  +I+  C +G + EA ELF  M+ RG E + ++YN++++G C  G    A  VF
Sbjct: 157 TASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVF 216

Query: 30  DLMVARGHGP 1
             M   G  P
Sbjct: 217 KKMEQNGCKP 226



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/122 (26%), Positives = 58/122 (47%)
 Frame = -2

Query: 366 NDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPDGHTYGII 187
           +DA      M +    P V  +   +       +    + L N+M   G+  + ++  ++
Sbjct: 70  DDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVL 129

Query: 186 IDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFDLMVARGH 7
           I+  C+   VD A  +   M + G      T+N+L++G C +G++KEA  +F+ MV RGH
Sbjct: 130 INCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGH 189

Query: 6   GP 1
            P
Sbjct: 190 EP 191


>ref|XP_002328376.1| predicted protein [Populus trichocarpa] gi|222838091|gb|EEE76456.1|
           predicted protein [Populus trichocarpa]
          Length = 599

 Score =  129 bits (325), Expect = 2e-28
 Identities = 62/130 (47%), Positives = 85/130 (65%)
 Frame = -2

Query: 390 ALCKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILP 211
           +LCK    NDA DLL  M  RGI PDV TY+ ++ G  + G   +A  LFNEM GR ++P
Sbjct: 241 SLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMP 300

Query: 210 DGHTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVF 31
           +  T+ I++D  CK+GMV EA  +F+ M ++G E +  TYN+LMDGYCL  +M EA+ V 
Sbjct: 301 NTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVL 360

Query: 30  DLMVARGHGP 1
           D+MV +G  P
Sbjct: 361 DIMVDKGCAP 370



 Score =  101 bits (251), Expect = 7e-20
 Identities = 50/128 (39%), Positives = 78/128 (60%)
 Frame = -2

Query: 384 CKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPDG 205
           CK+ + ++A  LL  MS++ + PD  TY+ L+ GL   G+ ++A+ LF EM   G+LPD 
Sbjct: 383 CKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDL 442

Query: 204 HTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFDL 25
            TY  ++D  CK G +DEA +L ++M E   E D V YN L++G  + G+++ AK +F  
Sbjct: 443 MTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSK 502

Query: 24  MVARGHGP 1
           + A G  P
Sbjct: 503 LFADGIQP 510



 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 48/128 (37%), Positives = 76/128 (59%)
 Frame = -2

Query: 384 CKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPDG 205
           C +G+  +A  L   M +RG  PDV +Y+ +I+GL  SG    A++L  +M  +G  P+ 
Sbjct: 173 CIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNL 232

Query: 204 HTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFDL 25
             Y  IID+ CKD +V++A +L   M++RG   D VTY++++ G+C  G + EA  +F+ 
Sbjct: 233 VAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNE 292

Query: 24  MVARGHGP 1
           MV R   P
Sbjct: 293 MVGRNVMP 300



 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 47/126 (37%), Positives = 76/126 (60%)
 Frame = -2

Query: 387 LCKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPD 208
           LCK+G  ++A  + + M+++G  P+ +TYNAL+DG   + +  +A ++ + M  +G  P 
Sbjct: 312 LCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPV 371

Query: 207 GHTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFD 28
            H+Y I+I+  CK   +DEA  L   M E+    DTVTY++LM G C  GR +EA ++F 
Sbjct: 372 VHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFK 431

Query: 27  LMVARG 10
            M + G
Sbjct: 432 EMCSSG 437



 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 45/125 (36%), Positives = 72/125 (57%)
 Frame = -2

Query: 387 LCKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPD 208
           LCK G  ++A  LL+ M +  I PD+  YN LI+G++ +GK + A  LF+++   GI P 
Sbjct: 452 LCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPT 511

Query: 207 GHTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFD 28
             TY I+I    K+G+ DEA+ELF+ M + G   ++ +YN ++ G+        A  + D
Sbjct: 512 IRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLID 571

Query: 27  LMVAR 13
            MV +
Sbjct: 572 EMVGK 576



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 41/129 (31%), Positives = 63/129 (48%)
 Frame = -2

Query: 387 LCKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPD 208
           LC+ G+  +A +L + M   G+ PD+ TY+ L+DGL   G   +A++L   M    I PD
Sbjct: 417 LCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPD 476

Query: 207 GHTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFD 28
              Y I+I+     G ++ A ELF  +   G +    TY  ++ G   +G   EA  +F 
Sbjct: 477 IVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFR 536

Query: 27  LMVARGHGP 1
            M   G  P
Sbjct: 537 KMEDDGFLP 545



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/122 (27%), Positives = 61/122 (50%)
 Frame = -2

Query: 366 NDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPDGHTYGII 187
           +DA      M +    P V  +   +  +    +    + L N+M   G+  + ++  I+
Sbjct: 74  DDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNIL 133

Query: 186 IDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFDLMVARGH 7
           I+  C+   V  A  +   M + G + D +T+N+L++G C++G +KEA  +F+ MV RGH
Sbjct: 134 INCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGH 193

Query: 6   GP 1
            P
Sbjct: 194 QP 195


>ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
           gi|355495133|gb|AES76336.1| Pentatricopeptide repeat
           protein-like protein [Medicago truncatula]
          Length = 841

 Score =  127 bits (320), Expect = 7e-28
 Identities = 62/126 (49%), Positives = 83/126 (65%)
 Frame = -2

Query: 387 LCKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPD 208
           +CK    NDAFDL      + I PDVFTYNALI G    GK KDAI LFN+MT + I+PD
Sbjct: 343 MCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPD 402

Query: 207 GHTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFD 28
            +T+ I++D  CKDG + EA  +   M+++  + D VTY+SLMDGYCL   + +A+S+F+
Sbjct: 403 VYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFN 462

Query: 27  LMVARG 10
            M  RG
Sbjct: 463 TMSHRG 468



 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 50/128 (39%), Positives = 75/128 (58%)
 Frame = -2

Query: 384 CKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPDG 205
           CK G   +A ++L +M ++ I PDV TY++L+DG     +   A  +FN M+ RG+  + 
Sbjct: 414 CKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANV 473

Query: 204 HTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFDL 25
            +Y I+I+  CK  MVDEA +LF+ M  +    D +TY+SL+DG C  GR+  A  + D 
Sbjct: 474 QSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDE 533

Query: 24  MVARGHGP 1
           M  RG  P
Sbjct: 534 MHYRGQQP 541



 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 49/126 (38%), Positives = 73/126 (57%)
 Frame = -2

Query: 384 CKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPDG 205
           CK    ++A  L + M  + I PDV TY++LIDGL  SG+   A+ L +EM  RG  PD 
Sbjct: 484 CKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDI 543

Query: 204 HTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFDL 25
            TY  I+DA CK   VD+A  L   +  +G   D  TY  L+ G C  G++++A+ VF+ 
Sbjct: 544 ITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFED 603

Query: 24  MVARGH 7
           ++ +G+
Sbjct: 604 LLVKGY 609



 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 41/126 (32%), Positives = 71/126 (56%)
 Frame = -2

Query: 387 LCKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPD 208
           LCK G+ + A +L+  M  RG  PD+ TYN+++D L        AI L  ++ G+GI PD
Sbjct: 518 LCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPD 577

Query: 207 GHTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFD 28
            +TY I++   C+ G +++A ++F+ ++ +G   D   Y  ++ G+C +G   EA ++  
Sbjct: 578 MNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLS 637

Query: 27  LMVARG 10
            M   G
Sbjct: 638 KMEENG 643



 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 43/128 (33%), Positives = 67/128 (52%)
 Frame = -2

Query: 384 CKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPDG 205
           C   + N A  +   MS RG+  +V +YN +I+G        +A++LF EM  + I PD 
Sbjct: 449 CLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDV 508

Query: 204 HTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFDL 25
            TY  +ID  CK G +  A EL   M  RG + D +TYNS++D  C +  + +A ++   
Sbjct: 509 ITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTK 568

Query: 24  MVARGHGP 1
           +  +G  P
Sbjct: 569 LKGQGIRP 576



 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 40/124 (32%), Positives = 68/124 (54%)
 Frame = -2

Query: 384 CKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPDG 205
           C +G+ + A      +   G + D  +Y  LI+GL   G+ K A+ L     G+ + PD 
Sbjct: 274 CLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDV 333

Query: 204 HTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFDL 25
             Y  IID  CKD  V++AF+L+   + +    D  TYN+L+ G+C+ G++K+A  +F+ 
Sbjct: 334 VMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNK 393

Query: 24  MVAR 13
           M ++
Sbjct: 394 MTSK 397



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 42/127 (33%), Positives = 64/127 (50%)
 Frame = -2

Query: 390 ALCKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILP 211
           ALCK+   + A  LL  +  +GI PD+ TY  L+ GL  SGK +DA ++F ++  +G   
Sbjct: 552 ALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNL 611

Query: 210 DGHTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVF 31
           D + Y ++I   C  G+ DEA  L   M E G   D  TY  ++     +     A+ + 
Sbjct: 612 DVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLL 671

Query: 30  DLMVARG 10
             M+ RG
Sbjct: 672 REMIMRG 678


>ref|XP_002328386.1| predicted protein [Populus trichocarpa] gi|222838101|gb|EEE76466.1|
           predicted protein [Populus trichocarpa]
          Length = 617

 Score =  127 bits (319), Expect = 9e-28
 Identities = 60/130 (46%), Positives = 83/130 (63%)
 Frame = -2

Query: 390 ALCKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILP 211
           +LCK    N+A + L  M  RGI PDV TYN ++ G  + G+  +A RLF EM GR ++P
Sbjct: 245 SLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMP 304

Query: 210 DGHTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVF 31
           D  T+ I++D  CK+GMV EA  + +TM E+G E +  TYN+LMDGYCL  +M EA  V 
Sbjct: 305 DTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVL 364

Query: 30  DLMVARGHGP 1
            +M+ +G  P
Sbjct: 365 GIMIGKGCAP 374



 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 51/129 (39%), Positives = 74/129 (57%)
 Frame = -2

Query: 387 LCKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPD 208
           LC +GK  +A  L   M   G  P+V +YN +I+GL  +G    A+R+F +M      P+
Sbjct: 176 LCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPN 235

Query: 207 GHTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFD 28
             TY  IID+ CKD +V+EA E    M++RG   D VTYN+++ G+C  G++ EA  +F 
Sbjct: 236 VVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFK 295

Query: 27  LMVARGHGP 1
            MV R   P
Sbjct: 296 EMVGRNVMP 304



 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 48/128 (37%), Positives = 75/128 (58%)
 Frame = -2

Query: 384 CKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPDG 205
           CK  + N+A  LL  MS++ + PD  TY+ L+ GL   G+ ++A+ LF EM   G+LPD 
Sbjct: 387 CKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDL 446

Query: 204 HTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFDL 25
             Y I++D  CK G +DEA +L + M ER  + + + Y  L+ G  + G+++ AK +F  
Sbjct: 447 MAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSK 506

Query: 24  MVARGHGP 1
           + A G  P
Sbjct: 507 LSADGIRP 514



 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 51/129 (39%), Positives = 70/129 (54%)
 Frame = -2

Query: 387 LCKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPD 208
           LCK G T  A  + + M Q    P+V TYN +ID L       +A+   +EM  RGI PD
Sbjct: 211 LCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPD 270

Query: 207 GHTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFD 28
             TY  I+   C  G ++EA  LF+ M+ R    DTVT+N L+DG C +G + EA+ V +
Sbjct: 271 VVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSE 330

Query: 27  LMVARGHGP 1
            M  +G  P
Sbjct: 331 TMTEKGAEP 339



 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 47/126 (37%), Positives = 76/126 (60%)
 Frame = -2

Query: 387 LCKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPD 208
           LCK+G  ++A  + + M+++G  P+ +TYNAL+DG     +  +AI++   M G+G  P+
Sbjct: 316 LCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPN 375

Query: 207 GHTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFD 28
             +Y I+I+  CK   ++EA  L   M E+    DTVTY++LM G C  GR +EA ++F 
Sbjct: 376 LSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFK 435

Query: 27  LMVARG 10
            M + G
Sbjct: 436 EMCSSG 441



 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 46/129 (35%), Positives = 69/129 (53%)
 Frame = -2

Query: 387 LCKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPD 208
           LC+    + A  ++  M + GI PD  T+N LI+GL   GK K+A+ LFNEM   G  P+
Sbjct: 141 LCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPN 200

Query: 207 GHTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFD 28
             +Y  +I+  CK+G    A  +F+ M +   + + VTYN+++D  C    + EA     
Sbjct: 201 VISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLS 260

Query: 27  LMVARGHGP 1
            MV RG  P
Sbjct: 261 EMVDRGIPP 269



 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 44/128 (34%), Positives = 67/128 (52%)
 Frame = -2

Query: 384 CKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPDG 205
           C  G+ N+A  L + M  R + PD  T+N L+DGL   G   +A  +   MT +G  P+ 
Sbjct: 282 CSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNA 341

Query: 204 HTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFDL 25
           +TY  ++D  C    +DEA ++   MI +G   +  +YN L++GYC   RM EAK +   
Sbjct: 342 YTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSE 401

Query: 24  MVARGHGP 1
           M  +   P
Sbjct: 402 MSEKNLTP 409



 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 43/124 (34%), Positives = 71/124 (57%)
 Frame = -2

Query: 384 CKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPDG 205
           CK G  ++A  LL+ M +R I P++  Y  LI G++ +GK + A  LF++++  GI PD 
Sbjct: 457 CKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDI 516

Query: 204 HTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFDL 25
            TY ++I    K+G+ DEA+E F+ M + G   D+ +YN ++ G+        A  + D 
Sbjct: 517 WTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDE 576

Query: 24  MVAR 13
           MV +
Sbjct: 577 MVGK 580



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/124 (32%), Positives = 66/124 (53%)
 Frame = -2

Query: 384 CKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPDG 205
           C   + ++A  +L +M  +G  P++ +YN LI+G   S +  +A RL +EM+ + + PD 
Sbjct: 352 CLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDT 411

Query: 204 HTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFDL 25
            TY  ++   C+ G   EA  LF+ M   G   D + Y+ L+DG+C  G + EA  +   
Sbjct: 412 VTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKE 471

Query: 24  MVAR 13
           M  R
Sbjct: 472 MHER 475



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 36/123 (29%), Positives = 62/123 (50%)
 Frame = -2

Query: 390 ALCKQGKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILP 211
           ++ K+ + + A  L   M   G+  +V++ N LI+ L        A+ +  +M   GI P
Sbjct: 105 SIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQP 164

Query: 210 DGHTYGIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVF 31
           D  T+  +I+  C +G + EA  LF  M+  G E + ++YN++++G C  G    A  VF
Sbjct: 165 DAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVF 224

Query: 30  DLM 22
             M
Sbjct: 225 RKM 227



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/100 (34%), Positives = 51/100 (51%)
 Frame = -2

Query: 375 GKTNDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPDGHTY 196
           GK   A +L   +S  GI PD++TYN +I GL   G   +A   F +M   G LPD  +Y
Sbjct: 495 GKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSY 554

Query: 195 GIIIDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMD 76
            +II    ++     A +L   M+ +   AD+ T+  L+D
Sbjct: 555 NVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLD 594



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/122 (27%), Positives = 62/122 (50%)
 Frame = -2

Query: 366 NDAFDLLQVMSQRGINPDVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPDGHTYGII 187
           +DA      M +    P V  +   +  +    +   A+ L N+M   G+  + ++  ++
Sbjct: 78  DDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVL 137

Query: 186 IDACCKDGMVDEAFELFQTMIERGDEADTVTYNSLMDGYCLQGRMKEAKSVFDLMVARGH 7
           I+  C+   VD A  +   M + G + D +T+N+L++G C +G++KEA  +F+ MV  GH
Sbjct: 138 INCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGH 197

Query: 6   GP 1
            P
Sbjct: 198 EP 199