BLASTX nr result

ID: Coptis25_contig00004479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004479
         (1472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552185.1| PREDICTED: protein SRG1-like [Glycine max]        323   e-104
ref|XP_003552186.1| PREDICTED: protein SRG1-like [Glycine max]        318   e-102
emb|CBI31645.3| unnamed protein product [Vitis vinifera]              303   4e-95
ref|XP_002278096.2| PREDICTED: protein SRG1-like [Vitis vinifera]     303   4e-95
emb|CBI30521.3| unnamed protein product [Vitis vinifera]              336   1e-89

>ref|XP_003552185.1| PREDICTED: protein SRG1-like [Glycine max]
          Length = 364

 Score =  323 bits (829), Expect(2) = e-104
 Identities = 158/279 (56%), Positives = 202/279 (72%), Gaps = 4/279 (1%)
 Frame = +2

Query: 17  EQVPTSRSSV-VANVQEMVRRSPSYVPENYITNQDDRPNCSPV---SSDVPVIDLSLLDG 184
           E+ P+  SS+ V NVQEMVR +P  VP+ Y+ ++++    S +   SS VP IDL+LL  
Sbjct: 2   EEAPSFASSIPVPNVQEMVRNNPLQVPQRYVRSREELDKVSHMPHLSSKVPFIDLALLSR 61

Query: 185 RNEEELKKLDLACKHWGFFQVTNHGVAEEILNNMKDTTSSFFKLPFEDKKKYATPPNGIQ 364
            N+EEL KLDLACK WGFFQ+ NHGV +E+L  MKD  S FF+LP E+KKKYA   + IQ
Sbjct: 62  GNKEELLKLDLACKEWGFFQIVNHGVQKELLQKMKDAASEFFELPAEEKKKYAMDSSDIQ 121

Query: 365 GYGIPYVVLEKQKLDWSDALILNICPSTFRKLEYWPTTPPKLKDAIETYSSEVNRIAKXX 544
           GYG  YVV E+Q LDWSDAL+L   P+ +RKL++WP TP   K+ IE Y+SEV R+++  
Sbjct: 122 GYGQAYVVSEEQTLDWSDALMLVTYPTRYRKLQFWPKTPEGFKEIIEAYASEVRRVSQEL 181

Query: 545 XXXXXXXXXXEKEALLAMHKEVMQSLRVNYYPTCSMPDRVLGVSPHSDTSSITILMQDDD 724
                     +K  LL +H+E +Q+LRVNYYP CS P++VLG+SPHSD ++IT+LMQDDD
Sbjct: 182 LSLLSVIMGMQKHVLLELHQESLQALRVNYYPPCSTPEQVLGLSPHSDANTITLLMQDDD 241

Query: 725 ITGLHIRHDGGWVAVKPISNSLVVNIGDCIEFWSNGKYK 841
           ITGL IRH GGWV V PIS++LVVN+GD IE WSNGKYK
Sbjct: 242 ITGLEIRHQGGWVPVTPISDALVVNVGDVIEIWSNGKYK 280



 Score = 83.6 bits (205), Expect(2) = e-104
 Identities = 41/75 (54%), Positives = 50/75 (66%)
 Frame = +3

Query: 840  KSVEHRAVTNKTTARISFASFIMPYHDIEIEPLDQMVDSQNPLKIYKKIKYGDYXXXXXX 1019
            KSVEHRAVTNK   RIS+A F+ P  D+E+EPLD M+DS NP K+Y+K++YGDY      
Sbjct: 280  KSVEHRAVTNKNKRRISYALFLCPQDDVEVEPLDYMIDSHNP-KLYQKVRYGDYLRQSMK 338

Query: 1020 XXXXGKAHTMKAKLE 1064
                GKAH   A  E
Sbjct: 339  RKMEGKAHIDVAMTE 353


>ref|XP_003552186.1| PREDICTED: protein SRG1-like [Glycine max]
          Length = 361

 Score =  318 bits (815), Expect(2) = e-102
 Identities = 158/279 (56%), Positives = 200/279 (71%), Gaps = 4/279 (1%)
 Frame = +2

Query: 17  EQVPTSRSSV-VANVQEMVRRSPSYVPENYITNQDD--RPNCSP-VSSDVPVIDLSLLDG 184
           ++ P+  SS+ V NVQEMVR +P  VPE Y  +Q++  + N  P +SS+VPVIDL+LL  
Sbjct: 2   DEAPSFASSLPVPNVQEMVRNNPLQVPERYARSQEELEKVNHMPHLSSEVPVIDLALLSN 61

Query: 185 RNEEELKKLDLACKHWGFFQVTNHGVAEEILNNMKDTTSSFFKLPFEDKKKYATPPNGIQ 364
            N+EEL KLD+ACK WGFFQ+ NHGV E  L  MKD +S FFKLP E+K KYA+  N   
Sbjct: 62  GNKEELLKLDVACKEWGFFQIVNHGVQEH-LQKMKDASSEFFKLPIEEKNKYASASNDTH 120

Query: 365 GYGIPYVVLEKQKLDWSDALILNICPSTFRKLEYWPTTPPKLKDAIETYSSEVNRIAKXX 544
           GYG  YVV E+Q LDWSDAL+L   P+ +RKL++WP TP    D I+ Y+SEV R+ +  
Sbjct: 121 GYGQAYVVSEEQTLDWSDALMLITYPTRYRKLQFWPKTPEGFMDIIDAYASEVRRVGEEL 180

Query: 545 XXXXXXXXXXEKEALLAMHKEVMQSLRVNYYPTCSMPDRVLGVSPHSDTSSITILMQDDD 724
                     +K  LL +HKE +Q+LRVNYYP CS P++VLG+SPHSDTS+IT+LMQDDD
Sbjct: 181 ISSLSVIMGMQKHVLLGLHKESLQALRVNYYPPCSTPEQVLGLSPHSDTSTITLLMQDDD 240

Query: 725 ITGLHIRHDGGWVAVKPISNSLVVNIGDCIEFWSNGKYK 841
           +TGL I+H GGWV V PI ++LVVN+GD IE WSNGKYK
Sbjct: 241 VTGLEIQHQGGWVPVTPIPDALVVNVGDVIEIWSNGKYK 279



 Score = 81.3 bits (199), Expect(2) = e-102
 Identities = 39/75 (52%), Positives = 51/75 (68%)
 Frame = +3

Query: 840  KSVEHRAVTNKTTARISFASFIMPYHDIEIEPLDQMVDSQNPLKIYKKIKYGDYXXXXXX 1019
            KSVEHRAVT+K   RIS+A F+ P  D+EIEPLD M+D+Q P K+Y+K++YGDY      
Sbjct: 279  KSVEHRAVTSKNKRRISYALFLCPRDDVEIEPLDHMIDAQKP-KLYQKVRYGDYLRQSMK 337

Query: 1020 XXXXGKAHTMKAKLE 1064
                GK H   A++E
Sbjct: 338  RKMEGKTHMDVARIE 352


>emb|CBI31645.3| unnamed protein product [Vitis vinifera]
          Length = 367

 Score =  303 bits (775), Expect(2) = 4e-95
 Identities = 144/281 (51%), Positives = 193/281 (68%), Gaps = 3/281 (1%)
 Frame = +2

Query: 8   QMSEQVPTSRSSVVANVQEMVRRSPSYVPENYITNQDDRP---NCSPVSSDVPVIDLSLL 178
           Q  +++   +S  V +VQE+V+     VPE YI    +RP   +  PVSS +P+IDL LL
Sbjct: 11  QEHQELGWGKSLPVPSVQEIVKNDSQSVPERYIQEHKNRPLGSDSCPVSSQIPIIDLHLL 70

Query: 179 DGRNEEELKKLDLACKHWGFFQVTNHGVAEEILNNMKDTTSSFFKLPFEDKKKYATPPNG 358
              +E+E  KL+ ACK WGFFQV NHGVAEE+L  MK   ++FF+LP E+KKKY+   N 
Sbjct: 71  ACGDEDERTKLNFACKEWGFFQVINHGVAEEVLQKMKTAVAAFFELPLEEKKKYSMAEND 130

Query: 359 IQGYGIPYVVLEKQKLDWSDALILNICPSTFRKLEYWPTTPPKLKDAIETYSSEVNRIAK 538
           +QGYG  YVV ++QKLDW D + L   P+ ++K++YWP T    K+ IE Y++E++++ +
Sbjct: 131 LQGYGQGYVVSDQQKLDWGDLIFLLTLPNKYKKMKYWPVTVTGFKEGIEEYATEMHKVTE 190

Query: 539 XXXXXXXXXXXXEKEALLAMHKEVMQSLRVNYYPTCSMPDRVLGVSPHSDTSSITILMQD 718
                       +K+ L  +H E+ Q++R+NYYPTCS PD VLGVSPHSD SSIT+L+QD
Sbjct: 191 EILGNLSLLMGMDKDGLRLLHAEMKQAMRLNYYPTCSRPDLVLGVSPHSDASSITVLLQD 250

Query: 719 DDITGLHIRHDGGWVAVKPISNSLVVNIGDCIEFWSNGKYK 841
           D+ITGL IRH GGWV VKPI N+LVVNIGD IE W+NG YK
Sbjct: 251 DEITGLQIRHKGGWVPVKPIPNALVVNIGDAIEAWNNGMYK 291



 Score = 73.6 bits (179), Expect(2) = 4e-95
 Identities = 37/75 (49%), Positives = 49/75 (65%)
 Frame = +3

Query: 840  KSVEHRAVTNKTTARISFASFIMPYHDIEIEPLDQMVDSQNPLKIYKKIKYGDYXXXXXX 1019
            KS+EHRAVTN+  AR+S A+F++P  D+EI P+D +V + +   +YKKIKY DY      
Sbjct: 291  KSIEHRAVTNEKRARMSIATFLIPEDDVEIGPVDSVVGTYHQPVMYKKIKYVDYLRYTLS 350

Query: 1020 XXXXGKAHTMKAKLE 1064
                GKAHT   KLE
Sbjct: 351  REMDGKAHTEFLKLE 365


>ref|XP_002278096.2| PREDICTED: protein SRG1-like [Vitis vinifera]
          Length = 358

 Score =  303 bits (775), Expect(2) = 4e-95
 Identities = 144/281 (51%), Positives = 193/281 (68%), Gaps = 3/281 (1%)
 Frame = +2

Query: 8   QMSEQVPTSRSSVVANVQEMVRRSPSYVPENYITNQDDRP---NCSPVSSDVPVIDLSLL 178
           Q  +++   +S  V +VQE+V+     VPE YI    +RP   +  PVSS +P+IDL LL
Sbjct: 2   QEHQELGWGKSLPVPSVQEIVKNDSQSVPERYIQEHKNRPLGSDSCPVSSQIPIIDLHLL 61

Query: 179 DGRNEEELKKLDLACKHWGFFQVTNHGVAEEILNNMKDTTSSFFKLPFEDKKKYATPPNG 358
              +E+E  KL+ ACK WGFFQV NHGVAEE+L  MK   ++FF+LP E+KKKY+   N 
Sbjct: 62  ACGDEDERTKLNFACKEWGFFQVINHGVAEEVLQKMKTAVAAFFELPLEEKKKYSMAEND 121

Query: 359 IQGYGIPYVVLEKQKLDWSDALILNICPSTFRKLEYWPTTPPKLKDAIETYSSEVNRIAK 538
           +QGYG  YVV ++QKLDW D + L   P+ ++K++YWP T    K+ IE Y++E++++ +
Sbjct: 122 LQGYGQGYVVSDQQKLDWGDLIFLLTLPNKYKKMKYWPVTVTGFKEGIEEYATEMHKVTE 181

Query: 539 XXXXXXXXXXXXEKEALLAMHKEVMQSLRVNYYPTCSMPDRVLGVSPHSDTSSITILMQD 718
                       +K+ L  +H E+ Q++R+NYYPTCS PD VLGVSPHSD SSIT+L+QD
Sbjct: 182 EILGNLSLLMGMDKDGLRLLHAEMKQAMRLNYYPTCSRPDLVLGVSPHSDASSITVLLQD 241

Query: 719 DDITGLHIRHDGGWVAVKPISNSLVVNIGDCIEFWSNGKYK 841
           D+ITGL IRH GGWV VKPI N+LVVNIGD IE W+NG YK
Sbjct: 242 DEITGLQIRHKGGWVPVKPIPNALVVNIGDAIEAWNNGMYK 282



 Score = 73.6 bits (179), Expect(2) = 4e-95
 Identities = 37/75 (49%), Positives = 49/75 (65%)
 Frame = +3

Query: 840  KSVEHRAVTNKTTARISFASFIMPYHDIEIEPLDQMVDSQNPLKIYKKIKYGDYXXXXXX 1019
            KS+EHRAVTN+  AR+S A+F++P  D+EI P+D +V + +   +YKKIKY DY      
Sbjct: 282  KSIEHRAVTNEKRARMSIATFLIPEDDVEIGPVDSVVGTYHQPVMYKKIKYVDYLRYTLS 341

Query: 1020 XXXXGKAHTMKAKLE 1064
                GKAHT   KLE
Sbjct: 342  REMDGKAHTEFLKLE 356


>emb|CBI30521.3| unnamed protein product [Vitis vinifera]
          Length = 943

 Score =  336 bits (861), Expect = 1e-89
 Identities = 163/288 (56%), Positives = 206/288 (71%), Gaps = 3/288 (1%)
 Frame = +2

Query: 47   VANVQEMVRRSPSYVPENYITNQDDRPNCSP---VSSDVPVIDLSLLDGRNEEELKKLDL 217
            V NVQEM R +P  VPE YI NQ+D P  +    +S ++PVIDLSLL   ++EELKKL+L
Sbjct: 265  VPNVQEMERSNPMQVPERYIRNQEDMPKTTDAIHLSCEIPVIDLSLLSNGHKEELKKLEL 324

Query: 218  ACKHWGFFQVTNHGVAEEILNNMKDTTSSFFKLPFEDKKKYATPPNGIQGYGIPYVVLEK 397
            AC+ WGFFQV NHGVAEE+L  MK + S FF+LP ++K KYA   + IQGYG  +VV E+
Sbjct: 325  ACEEWGFFQVVNHGVAEEVLQGMKYSASEFFELPLQEKNKYAMASDDIQGYGQAFVVSEE 384

Query: 398  QKLDWSDALILNICPSTFRKLEYWPTTPPKLKDAIETYSSEVNRIAKXXXXXXXXXXXXE 577
            QKLDWSD L+L I P+ FRKL++WP  P + K+ IE YS+EV R+ +            +
Sbjct: 385  QKLDWSDILVLVIYPTRFRKLKFWPNAPKEFKEKIEVYSNEVKRVGEELLCSLSLIMGMD 444

Query: 578  KEALLAMHKEVMQSLRVNYYPTCSMPDRVLGVSPHSDTSSITILMQDDDITGLHIRHDGG 757
            K+ LL +HKE +Q+LRVNYYPTCS+PD+VLGVSPHSDTS +TILMQDDD+TGL I+H G 
Sbjct: 445  KDTLLGLHKEFVQALRVNYYPTCSIPDQVLGVSPHSDTSILTILMQDDDVTGLQIKHSGE 504

Query: 758  WVAVKPISNSLVVNIGDCIEFWSNGKYKKR*TQSSDKQNHGKDFFCFF 901
            WV VKPI N+LVVNIGD IE WSNGKY+    ++   +N  +  F  F
Sbjct: 505  WVPVKPIPNALVVNIGDVIEIWSNGKYRSIEHRAVTNKNRARISFASF 552



 Score =  312 bits (799), Expect = 2e-82
 Identities = 149/284 (52%), Positives = 201/284 (70%), Gaps = 3/284 (1%)
 Frame = +2

Query: 62   EMVRRSPSYVPENYITNQDDRP---NCSPVSSDVPVIDLSLLDGRNEEELKKLDLACKHW 232
            EMVR + S +P+ +  +++D+    + S +S  +PVIDL+LL   N EELKKL+ ACK W
Sbjct: 603  EMVRCNLSCIPDRFKRSEEDKSKGVDLSVLSPQIPVIDLALLSSENVEELKKLEWACKCW 662

Query: 233  GFFQVTNHGVAEEILNNMKDTTSSFFKLPFEDKKKYATPPNGIQGYGIPYVVLEKQKLDW 412
            GFF  TNHG+ EE+L  +KD  + FF+LPFE+KK Y+   N +QGYG P++V E +KLDW
Sbjct: 663  GFFMATNHGIPEEVLQRVKDAAAGFFELPFEEKKAYSLDSNEMQGYGQPFMVSE-EKLDW 721

Query: 413  SDALILNICPSTFRKLEYWPTTPPKLKDAIETYSSEVNRIAKXXXXXXXXXXXXEKEALL 592
            SD+LIL I PS F+KL++WPTTP   +D +ETYS+EV ++A+             K+ALL
Sbjct: 722  SDSLILRIYPSHFQKLKFWPTTPADFRDTVETYSTEVRKVAETLLGSLSLTMGMTKDALL 781

Query: 593  AMHKEVMQSLRVNYYPTCSMPDRVLGVSPHSDTSSITILMQDDDITGLHIRHDGGWVAVK 772
             +HK++ Q+LRVNYYPTC  PD+V+G+SPHSD +SI+IL+QDDD+TGL I+HDGGWV V 
Sbjct: 782  RLHKDMAQALRVNYYPTCRNPDQVIGISPHSDATSISILLQDDDVTGLEIQHDGGWVPVH 841

Query: 773  PISNSLVVNIGDCIEFWSNGKYKKR*TQSSDKQNHGKDFFCFFY 904
            PI NSLVVNIGD IE WSNGKY     ++   +N  +     F+
Sbjct: 842  PILNSLVVNIGDVIEMWSNGKYNSIEHRTMANENRARMSLATFF 885



 Score = 95.5 bits (236), Expect = 3e-17
 Identities = 43/69 (62%), Positives = 52/69 (75%)
 Frame = +3

Query: 840  KSVEHRAVTNKTTARISFASFIMPYHDIEIEPLDQMVDSQNPLKIYKKIKYGDYXXXXXX 1019
            +S+EHRAVTNK  ARISFASFI+P+ D+EIEP D +VDSQ P+KIYKK++YGDY      
Sbjct: 532  RSIEHRAVTNKNRARISFASFILPHDDVEIEPFDHLVDSQQPIKIYKKVRYGDYLRHSMK 591

Query: 1020 XXXXGKAHT 1046
                GK HT
Sbjct: 592  RKMEGKFHT 600



 Score = 71.2 bits (173), Expect = 6e-10
 Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
 Frame = +3

Query: 744  VMMEGGWQLSLYQIL*S*T--LVTVLSFGAMESTKSVEHRAVTNKTTARISFASFIMPYH 917
            +  +GGW + ++ IL S    +  V+   +     S+EHR + N+  AR+S A+F  P  
Sbjct: 831  IQHDGGW-VPVHPILNSLVVNIGDVIEMWSNGKYNSIEHRTMANENRARMSLATFFTPDT 889

Query: 918  DIEIEPLDQMVDSQNPLKIYKKIKYGDYXXXXXXXXXXGKAHTMKAK 1058
            D+EIEPLD ++D Q   +IYKK+KYGDY          GK +   AK
Sbjct: 890  DVEIEPLDHILDPQGSNRIYKKVKYGDYLTRSLWKKIEGKTNLRFAK 936


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