BLASTX nr result

ID: Coptis25_contig00004477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004477
         (1356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68960.1| hypothetical protein VITISV_019275 [Vitis vinifera]   204   3e-50
ref|XP_002324096.1| predicted protein [Populus trichocarpa] gi|2...   187   4e-45
ref|XP_003551752.1| PREDICTED: uncharacterized protein LOC100798...   163   1e-37
ref|XP_002526084.1| hypothetical protein RCOM_0524510 [Ricinus c...   162   1e-37
ref|XP_003530425.1| PREDICTED: uncharacterized protein LOC100787...   160   5e-37

>emb|CAN68960.1| hypothetical protein VITISV_019275 [Vitis vinifera]
          Length = 477

 Score =  204 bits (520), Expect = 3e-50
 Identities = 110/203 (54%), Positives = 154/203 (75%), Gaps = 6/203 (2%)
 Frame = +1

Query: 271 PQQPKQHNEQDNKKKTQALLTSLLRRIDALESTLPHFS----SLRDIAARTIQTHFRAYL 438
           PQ+P    EQ  +++T  LL+SLLRRIDALES+L HFS    SLRD AARTIQTHFRA+L
Sbjct: 79  PQRPSFLQEQQQQQQTHTLLSSLLRRIDALESSLLHFSTPSYSLRDAAARTIQTHFRAFL 138

Query: 439 VRRSRTLRHLKHLAMIKTSLNYLKNAVSDKPRFNYQAISQKAMDLLLKLDFIQGGDPMIR 618
           VRRSRTL HLK LA+IK++ N L++++S +  F+++A+S KAMDLLLKLD IQ  D MIR
Sbjct: 139 VRRSRTLAHLKELALIKSAFNSLRSSLSQQTHFDFEALSHKAMDLLLKLDSIQDSDSMIR 198

Query: 619 DGKRSISRDLVHFLEFIEGVSVKRQQVYSKSMKKVKFAEDNEENEDSSLYMGAKGDCKDD 798
           DGKRS++R+LV FL+FI+GVS +R Q+ +K ++ ++ A++  ++   +  +G+  +C+D 
Sbjct: 199 DGKRSVTRELVRFLDFIDGVSARRHQLRNKPIRNMRTAQNASKSRVLTGRVGS--NCRDS 256

Query: 799 --DQRELIEELCKKVENIEGFAR 861
             DQREL+E+L  +VE I GF+R
Sbjct: 257 GADQRELMEKLRDRVEKIRGFSR 279


>ref|XP_002324096.1| predicted protein [Populus trichocarpa] gi|222867098|gb|EEF04229.1|
           predicted protein [Populus trichocarpa]
          Length = 423

 Score =  187 bits (476), Expect = 4e-45
 Identities = 120/274 (43%), Positives = 159/274 (58%), Gaps = 45/274 (16%)
 Frame = +1

Query: 175 PCPPHHLQYHPQISTTTITDPLYQPLYSNL------------------------------ 264
           P P HH    PQ+S     DPL Q L S L                              
Sbjct: 32  PQPHHHPISPPQLSN----DPLLQSLVSLLQQQQQQQLQLQHHQSHIFSPCLDRPNSHTK 87

Query: 265 NIPQQPKQHNEQ-DNKKKTQALLTSLLRRIDALESTLPHFS------------SLRDIAA 405
           N  Q+PK H +Q D+ ++T  +L SLL+RI+ LES+L  FS            SLRD AA
Sbjct: 88  NHHQKPKLHFQQEDDPQQTHFVLASLLQRINTLESSLHQFSASCTNNHNYPSHSLRDTAA 147

Query: 406 RTIQTHFRAYLVRRSRTLRHLKHLAMIKTSLNYLKNAVSDKPRFNYQAISQKAMDLLLKL 585
           R IQTHFRA+LV RSRTLR LK LA IK+S N LK+++S +  F+++  S KAM LLLK+
Sbjct: 148 RVIQTHFRAFLVHRSRTLRQLKELAFIKSSFNSLKSSISTESHFDFKVASHKAMGLLLKI 207

Query: 586 DFIQGGDPMIRDGKRSISRDLVHFLEFIEGVSVKRQQVYSKSMKKVKFAEDNEENEDSSL 765
           D IQGGD MIRDGKRS++RDLV FLEF++G ++KR ++  KS + V+ A  N     +  
Sbjct: 208 DSIQGGDTMIRDGKRSVTRDLVRFLEFVDGFAIKRHELSYKSARNVR-ALGNTNKARALN 266

Query: 766 YMGAKGDCKD--DDQRELIEELCKKVENIEGFAR 861
                G C+D  + QRE++++L K+VE I GF+R
Sbjct: 267 AKNGYGGCRDLTESQREIVDKLRKRVEKISGFSR 300


>ref|XP_003551752.1| PREDICTED: uncharacterized protein LOC100798286 [Glycine max]
          Length = 452

 Score =  163 bits (412), Expect = 1e-37
 Identities = 100/239 (41%), Positives = 146/239 (61%), Gaps = 13/239 (5%)
 Frame = +1

Query: 169 SPPCPPHHLQYHPQISTTTITDPLYQPL-----------YSNLNIPQQPKQHNEQDNKKK 315
           +PP P HH       S  +   P   P+           + NL +P Q   H +  ++ +
Sbjct: 43  TPPPPQHHHLLQAISSLLSQPQPHLIPIPSQQHYTKSYTHQNLKLPTQ-NHHLQHPHQHQ 101

Query: 316 TQALLTSLLRRIDALESTLPHFS--SLRDIAARTIQTHFRAYLVRRSRTLRHLKHLAMIK 489
           T + ++SLL RI++LES+  H++  SLR  AAR IQTHFR++L RRSRTL  LKHLA IK
Sbjct: 102 THSTISSLLDRIESLESSFNHYTHHSLRHAAARVIQTHFRSFLARRSRTLAQLKHLASIK 161

Query: 490 TSLNYLKNAVSDKPRFNYQAISQKAMDLLLKLDFIQGGDPMIRDGKRSISRDLVHFLEFI 669
           ++ N LK++ S+    ++ AIS KAM+LLL+LD IQG DPMI DGKRSISRDLV FL+ I
Sbjct: 162 STFNALKSSFSNHTHVDFAAISLKAMNLLLELDSIQGCDPMIVDGKRSISRDLVQFLDSI 221

Query: 670 EGVSVKRQQVYSKSMKKVKFAEDNEENEDSSLYMGAKGDCKDDDQRELIEELCKKVENI 846
           E V++K+  ++ K+ K V   +  ++N +S           DD++R+L++ L  +VE +
Sbjct: 222 EEVALKKHVLHVKAGKTVGSVKKVQKNRNSD----------DDERRKLLQNLRCRVEKL 270


>ref|XP_002526084.1| hypothetical protein RCOM_0524510 [Ricinus communis]
           gi|223534581|gb|EEF36278.1| hypothetical protein
           RCOM_0524510 [Ricinus communis]
          Length = 465

 Score =  162 bits (411), Expect = 1e-37
 Identities = 99/240 (41%), Positives = 147/240 (61%), Gaps = 16/240 (6%)
 Frame = +1

Query: 196 QYHPQISTTTITDPLYQPLYSNLNIPQQPKQHN-----EQDNKKKTQALLTSLLRRIDAL 360
           Q  P +S+    +  +     N  +  QP++ N     E+ ++     +L+SLL+RI  L
Sbjct: 66  QQSPNLSSPYSNNKPHLHKNHNQRLHFQPQKFNFQHLSEEQDQDTNSFILSSLLQRIKIL 125

Query: 361 ESTLPHFS----------SLRDIAARTIQTHFRAYLVRRSRTLRHLKHLAMIKTSLNYLK 510
           ES+L  FS          SLR+ AAR IQTHFRA+LVRRSRTL  L+ LA IK+S N +K
Sbjct: 126 ESSLQQFSVSNRRCHHSYSLRETAARVIQTHFRAFLVRRSRTLSQLQDLASIKSSFNAMK 185

Query: 511 NAVSDKPRFNYQAISQKAMDLLLKLDFIQGGDPMIRDGKRSISRDLVHFLEFIEGVSVKR 690
           ++V +    ++  +S +AM LLLK+D IQGGDP+IRDGK+SISRD+V FL+FI+G+  K 
Sbjct: 186 SSVLNNTHLSHAVVSHRAMGLLLKIDSIQGGDPIIRDGKKSISRDIVRFLDFIDGLPGKG 245

Query: 691 Q-QVYSKSMKKVKFAEDNEENEDSSLYMGAKGDCKDDDQRELIEELCKKVENIEGFARKY 867
           Q     K +K V+F     ++  S+  +G +   +  +Q+E++E L ++VE I GF+R Y
Sbjct: 246 QGSSLYKPVKNVRFIRKMSKSRASNSNVGYEDLSR--NQKEIVENLSERVEKIRGFSRVY 303


>ref|XP_003530425.1| PREDICTED: uncharacterized protein LOC100787996 [Glycine max]
          Length = 452

 Score =  160 bits (406), Expect = 5e-37
 Identities = 100/237 (42%), Positives = 144/237 (60%), Gaps = 13/237 (5%)
 Frame = +1

Query: 175 PCPPHHLQYHPQISTTTITDPLYQPL-----------YSNLNIPQQPKQHNEQDNKKKTQ 321
           P PP H  +  Q+  + ++ P   P+           + NLN+P Q   H+ Q   ++  
Sbjct: 48  PSPPQH-HHLLQVIASLLSQPQPHPIPIPIPSQQHYTHQNLNLPTQ--NHHPQ---RQPH 101

Query: 322 ALLTSLLRRIDALESTLPHFS--SLRDIAARTIQTHFRAYLVRRSRTLRHLKHLAMIKTS 495
           + ++SLL RI+ LES+L H++  SLR  AAR IQTHFR+ L RRSRTL  LKHLA IK++
Sbjct: 102 STMSSLLHRIETLESSLNHYTHHSLRHAAARLIQTHFRSLLARRSRTLSQLKHLASIKST 161

Query: 496 LNYLKNAVSDKPRFNYQAISQKAMDLLLKLDFIQGGDPMIRDGKRSISRDLVHFLEFIEG 675
            N LK++ S     ++ AIS KAM+LLL+LD IQG DPMI DGKRSISRDLV FL+ +E 
Sbjct: 162 FNALKSSFSSHTHVDFAAISLKAMNLLLELDSIQGCDPMIVDGKRSISRDLVQFLDSVEE 221

Query: 676 VSVKRQQVYSKSMKKVKFAEDNEENEDSSLYMGAKGDCKDDDQRELIEELCKKVENI 846
           V++K+  +Y K+ K V+      +   +S          DD++R+L++ L  +VE +
Sbjct: 222 VALKKHVLYVKAAKPVRSGGKKVQKHRNS---------DDDERRKLLQNLRGRVEKL 269


Top