BLASTX nr result

ID: Coptis25_contig00004467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004467
         (4818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278761.1| PREDICTED: uncharacterized protein LOC100259...   320   2e-84
emb|CAN67283.1| hypothetical protein VITISV_021595 [Vitis vinifera]   306   3e-80
ref|XP_003544521.1| PREDICTED: uncharacterized protein LOC100813...   258   1e-65
ref|XP_002308576.1| predicted protein [Populus trichocarpa] gi|2...   258   1e-65
ref|XP_003550280.1| PREDICTED: uncharacterized protein LOC100782...   252   6e-64

>ref|XP_002278761.1| PREDICTED: uncharacterized protein LOC100259454 [Vitis vinifera]
          Length = 690

 Score =  320 bits (820), Expect = 2e-84
 Identities = 184/400 (46%), Positives = 215/400 (53%), Gaps = 13/400 (3%)
 Frame = -3

Query: 1504 QNRVRNPSMGGGYSQQGFRXXXXXXXXXXXXXXXXG---YGYMQPGAYPGAPPQYSMSQP 1334
            +NR+RNP+M GGY QQG++                    Y Y QPG+YPG  PQY+MSQP
Sbjct: 301  ENRIRNPAMAGGYPQQGYQARPPSGWGAPPGAPPMQQPGYSYAQPGSYPGPSPQYNMSQP 360

Query: 1333 PYTGYPPQATSTGWDXXXXXXXXXXXXXGGYDYYNQQP---QQPSTGGASAPADNTGYNY 1163
             Y GY  Q  +TGWD              GYDYY QQ    QQ + GG S PADN+GYNY
Sbjct: 361  AYAGYS-QPNATGWDQTAAPPSQQTTPGSGYDYYGQQQTQQQQQAHGGPSGPADNSGYNY 419

Query: 1162 NQAPASNXXXXXXXXXXXXXXXXXXXXXXXYTQDGYGSGYHAPAPQAGYGQPQANPQSGY 983
            NQ PAS                          QDGYG GYHAPAPQ GYGQPQ  P  GY
Sbjct: 420  NQPPASGYNQQGQGYP----------------QDGYGGGYHAPAPQPGYGQPQPIP--GY 461

Query: 982  DQAQGYNSAPTYATGVNXXXXXXXXXXXXXXPT-QVTPSVQPAVGAQQGYSTQQPN-TPP 809
            DQ QGYNSA  Y    N               T Q  PSVQP+   QQGY+TQQP+ +P 
Sbjct: 462  DQQQGYNSATGYGNVANPTQEGHTTSYGAQGETGQAPPSVQPSAIGQQGYNTQQPSPSPA 521

Query: 808  SYPTQAVQS---GYPPSSQPGYGAQMPATSGYGQSAPPTQPSYGPPQGQKAPSSQAIYGQ 638
            SYP Q       G PP+SQ G+G+Q PA SGY         +YGPPQ QKAP++  +YGQ
Sbjct: 522  SYPPQGSNQPAYGMPPTSQTGFGSQPPAQSGY-------TTNYGPPQAQKAPANPPVYGQ 574

Query: 637  TQP-PSSQAGYTQPATAQPVYAHAQSTPTHSGSAQSDSGHHRPPASGFGSAAPQAGYVQP 461
            TQ  PS+Q GY QPA  QP Y H+Q  P  SG AQ+DS   R   S +G+AA Q GY  P
Sbjct: 575  TQQSPSAQGGYAQPAPVQPGYPHSQQPPAQSGYAQTDSSSQRAAPSSYGTAAGQPGYGGP 634

Query: 460  Q-YGVPLTSQPGYGXXXXQTYGDSYAGAYTQPPVFSGDGT 344
              Y  P  +Q GYG      Y  SY G Y+QPP+++ D T
Sbjct: 635  SAYSAPTVTQAGYG--QQPPYSGSYGGGYSQPPMYAADAT 672


>emb|CAN67283.1| hypothetical protein VITISV_021595 [Vitis vinifera]
          Length = 382

 Score =  306 bits (785), Expect = 3e-80
 Identities = 179/392 (45%), Positives = 207/392 (52%), Gaps = 13/392 (3%)
 Frame = -3

Query: 1480 MGGGYSQQGFRXXXXXXXXXXXXXXXXG---YGYMQPGAYPGAPPQYSMSQPPYTGYPPQ 1310
            M GGY QQG++                    Y Y QPG+YPG  PQY+MSQP Y GY  Q
Sbjct: 1    MAGGYPQQGYQARPPSGWGAPPGAPPMQQPGYSYAQPGSYPGPSPQYNMSQPAYAGYS-Q 59

Query: 1309 ATSTGWDXXXXXXXXXXXXXGGYDYYNQQP---QQPSTGGASAPADNTGYNYNQAPASNX 1139
              +TGWD              GYDYY QQ    QQ + GG S PADN+GYNYNQ PAS  
Sbjct: 60   PNATGWDQTAAPPSQQTTPGSGYDYYGQQQTQQQQQAHGGPSGPADNSGYNYNQPPASGY 119

Query: 1138 XXXXXXXXXXXXXXXXXXXXXXYTQDGYGSGYHAPAPQAGYGQPQANPQSGYDQAQGYNS 959
                                    QDGYG GYHAPAPQ GYGQPQ  P  GYDQ QGYNS
Sbjct: 120  NQQGQGYP----------------QDGYGGGYHAPAPQPGYGQPQPIP--GYDQQQGYNS 161

Query: 958  APTYATGVNXXXXXXXXXXXXXXPT-QVTPSVQPAVGAQQGYSTQQPN-TPPSYPTQAVQ 785
            A  Y    N               T Q  PSVQP+   QQGY+TQQP+ +P SYP Q   
Sbjct: 162  ATGYGNVANPTQEGHTTSYGAQGETGQAPPSVQPSAIGQQGYNTQQPSPSPASYPPQGSN 221

Query: 784  S---GYPPSSQPGYGAQMPATSGYGQSAPPTQPSYGPPQGQKAPSSQAIYGQTQP-PSSQ 617
                G PP+SQ G+G+Q PA SGY         +YGPPQ QKAP++  +YGQTQ  PS+Q
Sbjct: 222  QPAYGMPPTSQTGFGSQPPAQSGY-------TTNYGPPQAQKAPANPPVYGQTQQSPSAQ 274

Query: 616  AGYTQPATAQPVYAHAQSTPTHSGSAQSDSGHHRPPASGFGSAAPQAGYVQPQ-YGVPLT 440
             GY QPA  QP Y H+Q  P  SG AQ+DS   R   S +G+AA Q GY  P  Y  P  
Sbjct: 275  GGYAQPAPVQPGYPHSQQPPAQSGYAQTDSSSQRAAPSSYGTAAGQPGYGGPSAYSAPTV 334

Query: 439  SQPGYGXXXXQTYGDSYAGAYTQPPVFSGDGT 344
            +Q GYG      Y  SY G Y+QPP+++ D T
Sbjct: 335  TQAGYG--QQPPYSGSYGGGYSQPPMYAADAT 364


>ref|XP_003544521.1| PREDICTED: uncharacterized protein LOC100813135 [Glycine max]
          Length = 670

 Score =  258 bits (659), Expect = 1e-65
 Identities = 172/409 (42%), Positives = 206/409 (50%), Gaps = 12/409 (2%)
 Frame = -3

Query: 1504 QNRVRNPSMGGGYSQQGFRXXXXXXXXXXXXXXXXG-YGYMQPGAYPGAPPQYSMSQPPY 1328
            +NR RNP+M GGYSQQG++                  YGY+QPGAY G PPQY+M Q  Y
Sbjct: 288  ENRHRNPAMSGGYSQQGYQARPPTSWGPPAAPMQQSGYGYVQPGAYSG-PPQYNMPQQQY 346

Query: 1327 TGYPPQAT----STGWDXXXXXXXXXXXXXGGYDYYNQQPQQPSTGGASAPADNTGYNYN 1160
             GYPPQ++    +T WD              GYDYY+QQ QQ      +  +D T YNY+
Sbjct: 347  AGYPPQSSGGYSATNWDQSTAPQQQSTHA--GYDYYSQQQQQ----NPAPSSDGTAYNYS 400

Query: 1159 QAPASNXXXXXXXXXXXXXXXXXXXXXXXYTQDGYGSGYHAPAPQAGYGQPQANPQSGYD 980
            Q P+S                          QDGYG GYHAP PQ GYGQP +     YD
Sbjct: 401  QPPSSGYNQPGQGY----------------AQDGYG-GYHAP-PQLGYGQPPS-----YD 437

Query: 979  QAQGYNSAPTYATGVNXXXXXXXXXXXXXXPTQVTPSVQPAVGAQQGYSTQQPNTP--PS 806
            Q QGY+SAP+Y  G N               +   P  QP     QGY T Q  +P   +
Sbjct: 438  QQQGYSSAPSY--GSNPAQEGHTANYGSQGDSTQAPPAQPP---SQGYGTSQQPSPNAAN 492

Query: 805  YPTQAVQSGY--PPSSQPG-YGAQMPATSGYGQSAPPTQPSYGPPQGQKAPSSQAIYGQT 635
            YP QA Q GY  PP+SQP  YG+Q PA SGYG         YGPPQ QK   +  +YGQ+
Sbjct: 493  YPPQA-QPGYGVPPTSQPAAYGSQPPAQSGYGSG-------YGPPQTQKPSGTPPVYGQS 544

Query: 634  QPPSSQAGYTQPATAQPVYAHAQSTPTHSGSAQSDSGHHRPPASGFGSAAPQAGYVQPQY 455
            Q P++  GY Q    Q  Y  +Q  P+  G AQ +SG  + P SG+G A  Q GY  P Y
Sbjct: 545  QSPNTAGGYGQSGHLQSGYPPSQPPPS-GGYAQPESGSQKAPPSGYGGAV-QPGYGPPSY 602

Query: 454  -GVPLTSQPGYGXXXXQTYGDSY-AGAYTQPPVFSGDGTVGSNSHGTYD 314
             GVP   QPGYG         SY AG Y QPPV+S DG  G  + GTYD
Sbjct: 603  GGVPAGGQPGYGQAPPSYSNSSYGAGGYAQPPVYSSDGNAGGTTRGTYD 651


>ref|XP_002308576.1| predicted protein [Populus trichocarpa] gi|222854552|gb|EEE92099.1|
            predicted protein [Populus trichocarpa]
          Length = 385

 Score =  258 bits (659), Expect = 1e-65
 Identities = 178/409 (43%), Positives = 207/409 (50%), Gaps = 15/409 (3%)
 Frame = -3

Query: 1495 VRNPSMGGGYSQQGF--RXXXXXXXXXXXXXXXXGYGYMQPGAYPGAPPQYSMSQPPYTG 1322
            +RNP+MGGGY QQG+  R                GYGYMQ GAYPGA  QY+MSQP Y G
Sbjct: 1    MRNPNMGGGYPQQGYQARPPTNWGPSSAPPMQQAGYGYMQTGAYPGASAQYNMSQPAYQG 60

Query: 1321 YPPQATSTG----WDXXXXXXXXXXXXXGGYDYYNQQP--QQPSTGGASAPADNTGYNYN 1160
            YPPQ  S G    WD               YDYY+Q P  QQ + G ++APAD+TGYNY+
Sbjct: 61   YPPQQPSGGYPSNWDQSAVSANQQNQV---YDYYSQPPSSQQQTPGASAAPADSTGYNYS 117

Query: 1159 QAPASNXXXXXXXXXXXXXXXXXXXXXXXYTQDGYGSGYHAPAPQAGYGQPQANPQSGYD 980
            QAPAS                         +QDGYG GY  P    GYGQP       YD
Sbjct: 118  QAPASGYNQQGQGY----------------SQDGYG-GYQQP----GYGQPPP-----YD 151

Query: 979  QAQGYNSAPTYATGVNXXXXXXXXXXXXXXPTQVTPSVQPAVGAQQGYST-QQPN-TPPS 806
            Q QGY +AP Y+   N               +    S QP+   QQGYST QQP+  P S
Sbjct: 152  QQQGYTAAPNYSNVANPTQEGHTPSYGAQADS-AQGSSQPSATGQQGYSTGQQPSPNPAS 210

Query: 805  YPTQ-AVQSGY--PPSSQPGYGAQMPATSGYGQSAPPTQPSYGPPQGQKAPSSQAIYGQT 635
            YP+Q A Q GY  PPSSQ GYG Q PA             SYG PQ QK P++  +YGQ+
Sbjct: 211  YPSQGAAQPGYGLPPSSQAGYGGQPPAQYA----------SYGAPQSQKPPANPPVYGQS 260

Query: 634  -QPPSSQAGYTQPATAQPVYAHAQSTPTHSGSAQ-SDSGHHRPPASGFGSAAPQAGYVQP 461
             Q PS+  GY QPA  QP Y  +Q  P  SG  Q  DSG  R   S +G+A  Q GY  P
Sbjct: 261  QQSPSTPGGYGQPA-GQPGYPPSQPPP--SGYVQPPDSGSQRAAPSSYGAAGAQPGYA-P 316

Query: 460  QYGVPLTSQPGYGXXXXQTYGDSYAGAYTQPPVFSGDGTVGSNSHGTYD 314
             YG P   QPGYG    Q Y  SY   Y QP  +S DG   +N+ GTY+
Sbjct: 317  TYGAPPAGQPGYG-QGAQPYNASYGSGYPQPAAYSADGNAANNARGTYE 364


>ref|XP_003550280.1| PREDICTED: uncharacterized protein LOC100782717 [Glycine max]
          Length = 672

 Score =  252 bits (644), Expect = 6e-64
 Identities = 169/409 (41%), Positives = 205/409 (50%), Gaps = 12/409 (2%)
 Frame = -3

Query: 1504 QNRVRNPSMGGGYSQQGFRXXXXXXXXXXXXXXXXG-YGYMQPGAYPGAPPQYSMSQPPY 1328
            +NR RNPSM GGYSQQG++                  YGY+QPGAY G PPQY++ Q PY
Sbjct: 290  ENRQRNPSMSGGYSQQGYQARPPTSWGPPAAPMQQSGYGYVQPGAYSG-PPQYNVPQQPY 348

Query: 1327 TGYPPQAT----STGWDXXXXXXXXXXXXXGGYDYYNQQPQQPSTGGASAPADNTGYNYN 1160
             GYPPQ++    +  WD              GYDYY+QQ QQ +    + P+D T YNY+
Sbjct: 349  AGYPPQSSGGYSAANWDQSTAPQQQSAHA--GYDYYSQQQQQQNP---APPSDGTAYNYS 403

Query: 1159 QAPASNXXXXXXXXXXXXXXXXXXXXXXXYTQDGYGSGYHAPAPQAGYGQPQANPQSGYD 980
            Q P+S                          QDGYG GYHAP PQ+GYGQP +     YD
Sbjct: 404  QPPSSGYSQPGQGY----------------AQDGYG-GYHAP-PQSGYGQPPS-----YD 440

Query: 979  QAQGYNSAPTYATGVNXXXXXXXXXXXXXXPTQVTPSVQPAVGAQQGYSTQQPNTP--PS 806
            Q QGY+SA +Y  G N               +   P  QP     QGY T Q  +P   +
Sbjct: 441  QQQGYSSAASY--GSNPAPEGHTANYGSQGDSTQAPPAQPP---SQGYGTGQQPSPNAAN 495

Query: 805  YPTQAVQSGY--PPSSQPG-YGAQMPATSGYGQSAPPTQPSYGPPQGQKAPSSQAIYGQT 635
            Y  QA Q GY  PP+SQP  YG+Q PA SGYG         YGPPQ QK   +  +YGQ+
Sbjct: 496  YAPQA-QPGYGVPPTSQPATYGSQPPAQSGYGSG-------YGPPQTQKPSGTPPVYGQS 547

Query: 634  QPPSSQAGYTQPATAQPVYAHAQSTPTHSGSAQSDSGHHRPPASGFGSAAPQAGYVQPQY 455
            Q P++  GY Q    Q  Y  +Q  P+  G AQ +SG  + P SG+G A  Q GY  P Y
Sbjct: 548  QSPNTAGGYGQSGHLQSGYPPSQPPPS-GGYAQPESGSQKAPPSGYGGAV-QPGYGPPSY 605

Query: 454  -GVPLTSQPGYGXXXXQTYGDSY-AGAYTQPPVFSGDGTVGSNSHGTYD 314
             G P   QPGYG         SY A  Y QPPV+S DG VG  + G YD
Sbjct: 606  GGAPAGGQPGYGQAPPSYSNSSYGAAGYAQPPVYSSDGNVGGTTRGAYD 654


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