BLASTX nr result
ID: Coptis25_contig00004454
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00004454
(1695 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera] 146 1e-32
emb|CBI26021.3| unnamed protein product [Vitis vinifera] 146 2e-32
ref|XP_002453394.1| hypothetical protein SORBIDRAFT_04g005220 [S... 120 8e-25
ref|XP_002513467.1| ubiquitin-protein ligase, putative [Ricinus ... 116 2e-23
ref|XP_003579406.1| PREDICTED: putative FBD-associated F-box pro... 112 3e-22
>emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera]
Length = 1789
Score = 146 bits (369), Expect = 1e-32
Identities = 136/449 (30%), Positives = 204/449 (45%), Gaps = 14/449 (3%)
Frame = +2
Query: 5 ILSLLTVKEAVRTSILSQRWRYLWKTSMASSPTLNLDVFSRRDSNALEMDFGDCFTGKFY 184
I+SLL +KEAVRT ILS+RWR +W T + +++ A + GDC
Sbjct: 1331 IISLLPLKEAVRTGILSKRWRSIW--------TCHSELWF---DAASVLGIGDCSXSMSG 1379
Query: 185 HCFRQPSKCLGFERHKFVGFVLQILHLDHSCVR-DSFRLRFYLEKDFAHPCNQWMDMAIA 361
+ QP + KFV V Q ++ + +SF + F L K+F
Sbjct: 1380 N---QPELNSQMQSXKFVERVDQFMYYRSQGPKINSFSIHFPLGKEFMS----------- 1425
Query: 362 QIKDFTHHIDQWIEMAIAKRSQTPDIGLSHFVILREIYRDGNL-----YYQFPS-LFSNH 523
HIDQWI A+ K + D+ LS + + RD Y+FP LFS
Sbjct: 1426 -------HIDQWITCAVMKGVENIDLDLSEYFSFN-LKRDDTSSTAFQIYEFPCRLFSVP 1477
Query: 524 EIGSSIKCLSLKGCSFRSLDSKG-YCSLIDLRLKNVLIVKDTIVSILSECPNLEKLFLSH 700
++K L L C +L S SLI + L+ V I + +LS C +LE+L L
Sbjct: 1478 GGRCTLKHLRLASCHLSALPSSNTLTSLITVDLQRVNISDQQLQDLLSTCSHLERLSLCV 1537
Query: 701 CQTLRSLKISGPKLKLKHLIVFFCFXXXXXXXXXXXXXXFLYSGKLIKFTPINVPKLSNV 880
C L +L S L+LK L + CF F Y G L F+ NVPKL+
Sbjct: 1538 CNGLVNLSFSALNLQLKFLSIKNCFRLETIEIHAADLVTFKYGGHLPSFSFKNVPKLAKA 1597
Query: 881 VIRTGLEYS-CHALSYARGNLSSDFPQMESL-MLSIAPIEEKKIPKRLTLFANLKKLVLL 1054
+ ++ S + YA D PQ+E+L +LS+ +++ ++P+ F N+K+ L
Sbjct: 1598 SLEFFIKSSRTEGVMYALTRFPQDLPQLETLKLLSVLTLKKLQLPENGPTFTNIKQFELT 1657
Query: 1055 V---TSCGGTLW-GFIPLLWASPYLQRLELHLSVRELEKIEEGLMERPSDFPHFHLEEII 1222
V W G+I L A P LQ+LEL+L K + + + PH HL +
Sbjct: 1658 VFPFDDDDDLSWIGYI--LKAFPLLQKLELNLFSPSFTKQPKEIERFLPECPHRHLSILQ 1715
Query: 1223 LGGFSGCSHDIEFAAYLLNNVKNLKRLTI 1309
+ GF G H+++ YLL+N+ L+ L +
Sbjct: 1716 INGFYGNQHEVDLLKYLLHNLVALELLVV 1744
>emb|CBI26021.3| unnamed protein product [Vitis vinifera]
Length = 487
Score = 146 bits (368), Expect = 2e-32
Identities = 137/449 (30%), Positives = 204/449 (45%), Gaps = 14/449 (3%)
Frame = +2
Query: 5 ILSLLTVKEAVRTSILSQRWRYLWKTSMASSPTLNLDVFSRRDSNALEMDFGDCFTGKFY 184
I+SLL +KEAVRT ILS+RWR +W T + +++ A + GDC T
Sbjct: 29 IISLLPLKEAVRTGILSKRWRSIW--------TCHSELWF---DAASVLGIGDCSTSMSG 77
Query: 185 HCFRQPSKCLGFERHKFVGFVLQILHLDHSCVR-DSFRLRFYLEKDFAHPCNQWMDMAIA 361
+ QP + KFV V Q ++ + +SF + F L K+F
Sbjct: 78 N---QPELNSQMQSSKFVERVDQFMYYRSQGRKINSFSIHFPLGKEFMS----------- 123
Query: 362 QIKDFTHHIDQWIEMAIAKRSQTPDIGLSHFVILREIYRDGNL-----YYQFPS-LFSNH 523
HIDQWI A+ K + D+ LS + + RD Y+FP LFS
Sbjct: 124 -------HIDQWITCAVMKGVENIDLDLSEYFSFN-LKRDDTSSTAFQIYEFPCRLFSVP 175
Query: 524 EIGSSIKCLSLKGCSFRSLDSKG-YCSLIDLRLKNVLIVKDTIVSILSECPNLEKLFLSH 700
++K L L C +L S SLI + L+ V I + +LS C +LE L L
Sbjct: 176 GGRCTLKHLRLASCHLSALPSSNTLTSLITVDLQRVNISDQQLQDLLSTCSHLEWLSLCV 235
Query: 701 CQTLRSLKISGPKLKLKHLIVFFCFXXXXXXXXXXXXXXFLYSGKLIKFTPINVPKLSNV 880
C L +L S L+LK L + CF F Y G L F+ NVPKL+
Sbjct: 236 CNGLVNLSFSALNLQLKFLSIKNCFRLETIEIHAADLVTFKYGGHLPSFSFKNVPKLAKA 295
Query: 881 VIRTGLEYS-CHALSYARGNLSSDFPQMESL-MLSIAPIEEKKIPKRLTLFANLKKLVLL 1054
+ ++ S + YA D PQ+E+L +LS+ +++ ++P+ F N+K+ L
Sbjct: 296 SLEFFIKSSRTEGVMYALTRFPQDLPQLETLKLLSVLTLKKLQLPENGPTFTNVKQFELT 355
Query: 1055 V---TSCGGTLW-GFIPLLWASPYLQRLELHLSVRELEKIEEGLMERPSDFPHFHLEEII 1222
V W G+I L A P LQ+LEL+L K + + + PH HL +
Sbjct: 356 VFPFDDDDDLSWIGYI--LKAFPLLQKLELNLFSPSFTKQPKEIERFLPECPHRHLSILQ 413
Query: 1223 LGGFSGCSHDIEFAAYLLNNVKNLKRLTI 1309
+ GF G H+++ YLL+N+ L+ L +
Sbjct: 414 INGFYGNQHEVDLLKYLLHNLVALELLVV 442
>ref|XP_002453394.1| hypothetical protein SORBIDRAFT_04g005220 [Sorghum bicolor]
gi|241933225|gb|EES06370.1| hypothetical protein
SORBIDRAFT_04g005220 [Sorghum bicolor]
Length = 494
Score = 120 bits (302), Expect = 8e-25
Identities = 130/488 (26%), Positives = 216/488 (44%), Gaps = 21/488 (4%)
Frame = +2
Query: 5 ILSLLTVKEAVRTSILSQRWRYLWKTSMASSPTLNLDVFSRRDSNALEMDFGDCFTGKFY 184
ILSLL + +AVRTS+LS++ +++W+ S LN D TG
Sbjct: 10 ILSLLPINDAVRTSVLSRKLKHVWR----SHTNLNFD------------------TGTMR 47
Query: 185 HCFRQPSKCL--GFERHKFVGFVLQILHLDHSCVRDSFRLRFYLEKDFAHPCNQWMDMAI 358
+ +PSK G + ++FV V ++ + + ++RF L A
Sbjct: 48 KGYFRPSKGYYSGLKDNEFVTRVDTVVQQHNGTGVEHMKIRFRLHSKHAD---------- 97
Query: 359 AQIKDFTHHIDQWIEMAIAKRSQTPDIGLS------HFVILREIYRD-GNLYYQFPSLFS 517
HID W+ +AIA +++ I LS F+ I R G Y FPS F
Sbjct: 98 --------HIDSWVSVAIASKTKEFVINLSGGSRGIFFLRGGRIRRMVGEEPYSFPSQFF 149
Query: 518 NHEIGSSIKCLSLKGCSFR-SLDSKGYCSLIDLRLKNVLIVKDTIVSILSECPNLEKLFL 694
+ S ++CL L S + D KG +L L L +V I + + ILS C LE L +
Sbjct: 150 SPNNCSHLRCLELWSVSLQLPSDFKGCLNLKSLTLVDVSITDEDVQCILSTCNLLEFLEI 209
Query: 695 SHCQTLRSLKISGPKLKLKHLIVFFCFXXXXXXXXXXXXXXFLYSGKLIKFTPINVPKLS 874
S+C + S+++ P +L HL+V C F YSG+ + + +L+
Sbjct: 210 SYCSMVTSIRMLHPLDRLMHLVVDIC-RKLQEIELNCSLTTFQYSGRTVPLKFASTSRLT 268
Query: 875 NVVIRTGLEYSCHALSYARGNLSSDFPQMESLMLSIAPIEEKKIPKRLTLFANLKKLVL- 1051
N+ + + S ALSY S P++E+L L E +P+ F L+ L L
Sbjct: 269 NINVVFLTDQS--ALSYMVTGFPSTSPRLETLTLYCYEHERTLVPEGPFKFTCLRDLRLD 326
Query: 1052 LVTSCGGT----LWGFIPLLWASPYLQRLELHLSVRELEK---IEEGLMERPSDFPHFHL 1210
LV + GT + + LL +P+++++EL + +R + E+G + H HL
Sbjct: 327 LVFAGKGTRNVDVLDYAYLLEIAPFMEKMELRMWIRWHHQPYCKEDGELRIGLPHQHAHL 386
Query: 1211 EEIILGGFSGCSHDIEFAAYLLNNVKNLKRLTIYSH-RLYYEMIPATLTRESQERVEA-- 1381
+ + + GF G +E A ++L + L+++ I + +++ Q V+
Sbjct: 387 KYVRISGFFGHKDQVELALHILGSCMVLEKMVITPKLEISTSHFQLSVSEYKQHYVDGHR 446
Query: 1382 LATEVTCK 1405
+ATE CK
Sbjct: 447 VATEFVCK 454
>ref|XP_002513467.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223547375|gb|EEF48870.1| ubiquitin-protein ligase,
putative [Ricinus communis]
Length = 464
Score = 116 bits (291), Expect = 2e-23
Identities = 135/494 (27%), Positives = 195/494 (39%), Gaps = 3/494 (0%)
Frame = +2
Query: 5 ILSLLTVKEAVRTSILSQRWRYLWKTSMASSPTLNLDVFSRRDSNALEMDFGDCFTGKFY 184
ILS LT+KEA RTSILS RWR+LW MDF D +Y
Sbjct: 46 ILSRLTMKEAARTSILSTRWRHLWTYYTGI------------------MDF-DASLTMWY 86
Query: 185 HCFRQPSKCLGFERHKFVGFVLQILHLDHSCVRDSFRLRFYLEKDFAHPCNQWMDMAIAQ 364
SK L ERH FV +V Q+L + R+ F L+
Sbjct: 87 LQLGLGSKSLDMERHSFVSWVNQVLRSHEGPTMEGLRICFDLD----------------- 129
Query: 365 IKDFTHHIDQWIEMAIAKRSQTPDIGLSHFVILREIYRDGNLYYQFPSLFSNHEIGSSIK 544
DF + ID WI +A+ KR + +I L++ I I G+ Y FPS N SS+K
Sbjct: 130 -SDFMYEIDSWITIAMQKRVKRLEIDLTN--IEPSIKTTGS--YAFPSGLLNDSSFSSLK 184
Query: 545 CLSLKGCSFRSLDSKGYCSLIDLRLKNVLIVKDTIVSILSECPNLEKLFLSHCQTLRSLK 724
L L +D G L+++L LS CP LE L + + +L SLK
Sbjct: 185 TLQL-----NMVDVTGEA------LQHLL---------LSWCPLLEVLSIVNSTSLVSLK 224
Query: 725 ISGPKLKLKHLIVFFCFXXXXXXXXXXXXXXFLYSGKLIKFTPINVPKLSNVVIRTGLEY 904
+SG LKLK+L + C F Y G LI +VP L +
Sbjct: 225 VSGSSLKLKYLEMVCCNNLKYLEITAASLVSFKYYGPLIGLPFKSVPNLVDASFGGPF-- 282
Query: 905 SCHALSYARGNLSSDFPQMESLMLSI-APIEEKKIPKRLTLFANLKKL--VLLVTSCGGT 1075
C S Q+E+L + + ++ P + +N+K L V++
Sbjct: 283 -CQLTIENLYQFSLYILQLETLRFDVGSAYLMREFPTNFPILSNVKHLEVTTAVSAVAHC 341
Query: 1076 LWGFIPLLWASPYLQRLELHLSVRELEKIEEGLMERPSDFPHFHLEEIILGGFSGCSHDI 1255
L+ + LL P L R L + E + + P D H L+ + + GF G + ++
Sbjct: 342 LFPCLSLLKGCPLLHRFTLKVISCESTLVCRASQKVPEDHSHPCLKVVEVLGFQGNAAEV 401
Query: 1256 EFAAYLLNNVKNLKRLTIYSHRLYYEMIPATLTRESQERVEALATEVTCKDKKTEEGAWE 1435
E Y L N LK L I Y P+ L + E ++
Sbjct: 402 ELVLYFLRNAAVLKNLIISPCAPCYLRSPSQLKFKETELYQSAKQHAV------------ 449
Query: 1436 QLGNLVRPGIELLL 1477
+LG V PG++ ++
Sbjct: 450 ELGARVPPGVDFVV 463
>ref|XP_003579406.1| PREDICTED: putative FBD-associated F-box protein At1g61330-like
[Brachypodium distachyon]
Length = 482
Score = 112 bits (280), Expect = 3e-22
Identities = 107/445 (24%), Positives = 184/445 (41%), Gaps = 10/445 (2%)
Frame = +2
Query: 5 ILSLLTVKEAVRTSILSQRWRYLWKTSMASSPTLNLDVFSRRDSNALEMDFGD----CFT 172
+LS L +KEA+RTS+LS +W+++W+ + ++ + D F
Sbjct: 41 VLSKLPLKEALRTSVLSTQWKHVWRGGCTKLDFTRKTILTKNERTTFTSRSRDDNRKMFI 100
Query: 173 GKFYHCFRQPSKCLGFERHKFVGFVLQILHLDHSCVRDSFRLRFYLEKDFAHPCNQWMDM 352
+ RQ S +G E+ + V+Q LH +H+
Sbjct: 101 KRVNSIIRQHSG-IGIEQFR----VIQPLHNEHA-------------------------- 129
Query: 353 AIAQIKDFTHHIDQWIEMAIAKRSQTPDIGLSHFVILREIYRDGNLYYQFPSLFSNHEIG 532
++D W+ AI +++ + + E + + Y F S +N
Sbjct: 130 ---------DYVDTWVNYAIESKAKELVLDMDW-----EAHGPEIVPYDFFSHSTNTNSY 175
Query: 533 SSIKCLSLKGCSFR-SLDSKGYCSLIDLRLKNVLIVKDTIVSILSECPNLEKLFLSHCQT 709
+ L L S R D G+ +L L L++V I + +L C L L ++HC+
Sbjct: 176 MHLNSLELNFVSLRLPADFTGFPNLTKLNLESVNITNEDTEHLLFICTLLVSLRIAHCKM 235
Query: 710 LRSLKISGPKLKLKHLIVFFCFXXXXXXXXXXXXXXFLYSGKLIKFTPINVPKLSNVVIR 889
L SL+ KLKHL+V C Y G +I +L+N+ I+
Sbjct: 236 LTSLRTRHLN-KLKHLVVLTC-PLLQEIELNCGITQLDYRGPIIPLALARSLRLTNICIK 293
Query: 890 TGLEYSCHALSYARGNLSSDFPQMESLMLSIAPIEEKKIPKRLTLFANLKKLVLLVTSCG 1069
++S A+ + + + +E L L I+ +P R+ F +L+ L L C
Sbjct: 294 LSTKHS--AIDFIFSEIPNTLHDLEVLTLRCTHIQRAVVPTRIFKFDSLRHLRLETIICR 351
Query: 1070 GTL--WGFIPLLWASPYLQRLELHLSVRELEK---IEEGLMERPSDFPHFHLEEIILGGF 1234
L LL A+P+L++ ELH+ + + +E+G + R +PH HL + + GF
Sbjct: 352 KKLDVLDLACLLEAAPFLEKFELHMVMNRDHRRYCLEDGELRRLPSYPHCHLNMVHITGF 411
Query: 1235 SGCSHDIEFAAYLLNNVKNLKRLTI 1309
G +E A Y+LNN LK + +
Sbjct: 412 YGQKDQLELALYVLNNATMLKEMKV 436