BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004427
         (3614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub...  1436   0.0  
emb|CBI35100.3| unnamed protein product [Vitis vinifera]             1405   0.0  
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...  1379   0.0  
ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat...  1378   0.0  
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...  1365   0.0  

>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
            vinifera]
          Length = 1142

 Score = 1436 bits (3717), Expect = 0.0
 Identities = 713/978 (72%), Positives = 825/978 (84%), Gaps = 3/978 (0%)
 Frame = -1

Query: 3488 VTNKLYYLQSGSARLGFWVKGREFLLPIGLVLKALIDTNDHEIYASLTCCYSDIYQKGER 3309
            VT KLYYL++GSARLGFW++GRE+LLP+G+VLKALIDT DHEIY SLTCCYS+ Y+ G+ 
Sbjct: 173  VTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDHEIYESLTCCYSEKYEGGKG 232

Query: 3308 SVGTQLVGERVKIILDEVQGLSLFTRAQCIQHIGKYFQSVMDGMDDETDSSVGETVLEEY 3129
            +VGTQLVGERVKIILDEV+ LSLFTR QC+QHIG++FQ VMDG+++E+ S V + VL EY
Sbjct: 233  AVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLVMDGLENESYSIVADAVLREY 292

Query: 3128 ILVHLQSGHDKYNLLIFMLQKLFAFIDHRATEDNTDALQNHEVLQPGHLITIYLKDKLHE 2949
            I VHL + +DK+NLLIFM+QKLF+ ID  +  DN D LQN EVL PGHLITIYLK+KL E
Sbjct: 293  IFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDVLQNQEVLLPGHLITIYLKEKLQE 352

Query: 2948 WLFKARRLLQDELSKKGQKFEFGSLLDVKKVLDRNPSKSIGTAIESMLKTGRLASQNGLD 2769
            WL+KARRLLQDE++K+ + FEF SL  VKKV+D+NPS+ I  A+E+MLKTGRL +Q+GLD
Sbjct: 353  WLYKARRLLQDEINKR-KNFEFSSLAHVKKVMDKNPSRQISLAVENMLKTGRLVTQSGLD 411

Query: 2768 LQQKGGMTVQAERLNFLRFISHFRSVHRGAAFAGNRNTSVRKLLPEAWGFLCPVHTPDGE 2589
            LQQ+ GMTVQAERLNFLRF+SHFR+VHRGA+FAG R TSVRKLLPEAWGFLCPVHTPDGE
Sbjct: 412  LQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPEAWGFLCPVHTPDGE 471

Query: 2588 PCGLLNHMASTCRITSYFDSKGNIKDFFKIRLSILSVLIGVGMTPSLPKLVRAGPPEVLS 2409
            PCGLLNHMASTCRITSYFDS+GN +DFFKIR+SILSVLIG+GMTP+LPKLV+AGPPEVLS
Sbjct: 472  PCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVLIGIGMTPALPKLVQAGPPEVLS 531

Query: 2408 VLLDGCVIGSISSNMVEKAVAHIRKLKLSANSGIPDDLEVGYVPLSVGGAYPGLYLFSSP 2229
            V+LDG V+GSI S+ VE AV H+R+LK+SA S IPDDLEVGY+PLS+GGAYPGLYLF+SP
Sbjct: 532  VILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIPDDLEVGYIPLSMGGAYPGLYLFTSP 591

Query: 2228 SRFVRPV--ISLNAEKNHDIELIGPFEQVYMEIRCADGGEEGRTDDNPATHEEMHPTGLL 2055
            SRFVRPV  IS+ +E+ HDIELIGPFEQVYMEIRC DG + GR +  PATHEE+HPTG+L
Sbjct: 592  SRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIRCPDGSDGGRRNIFPATHEEIHPTGML 651

Query: 2054 SVVANLTPYSDHNQSPRNMYQCQMAKQTVGFSSQALQFRADQKLYHLQTPQTPIVRTEAY 1875
            SVVA+LTP+SDHNQSPRNMYQCQM KQT+ FSSQA+  RADQKLYHLQTPQTPIVRT AY
Sbjct: 652  SVVASLTPWSDHNQSPRNMYQCQMGKQTMAFSSQAINCRADQKLYHLQTPQTPIVRTSAY 711

Query: 1874 TKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHTSIYQLETIDLEEQSGK 1695
             KY++DEFPTGTNAIVAVLAY+GYDMEDAMILNKSSV+RG+CH  IYQ ETIDL +++ K
Sbjct: 712  VKYSMDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCHGQIYQTETIDLSDENNK 771

Query: 1694 SDHVRQIFARSNIDKSVRSSVDSDGLPYVGQVLHPGQPYCSTNNTLSGAIKEHKLKGSEP 1515
            SD  +++F RSN+DKS  S +DSDGLPYVGQ+++P +PYCS  N ++ + +  KLKGSEP
Sbjct: 772  SDRGQRMFRRSNVDKSANSLIDSDGLPYVGQMINPNEPYCSIYNEVTSSTRATKLKGSEP 831

Query: 1514 VTVDYVAVDVKHNP-PQKVXXXXXXXXXXXIGDKFSSRHGQKGVCSQLWPDIDMPFSGTT 1338
            V VDYVA+D K+   PQKV           IGDKFSSRHGQKGVCSQLWPDIDMPFSG T
Sbjct: 832  VIVDYVALDAKNKKHPQKVNIRFRRPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVT 891

Query: 1337 GMRPDLIINPHAFPSRMTIGMLLESIAAKGGCLNGKFVDATPFPSSSRKENKELPIXXXX 1158
            GMRPDLIINPHAFPSRMTI MLLES+AAKGG L+GKFVDATPF  S RK N E       
Sbjct: 892  GMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFSDSLRKANGE------- 944

Query: 1157 XXXXXXXXSLLDELGPLLTSHGFNSLGSEVLYSGVLGTELVCEIFIGPVYYQRLRHMVSD 978
                    SL+DELG +LTS+GFN  G EVLYSG  GTEL CEIFIGPVYYQRLRHMVSD
Sbjct: 945  --AGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYGTELTCEIFIGPVYYQRLRHMVSD 1002

Query: 977  KFQVRNTGAVDPTTRQPMXXXXXXXGIRFGEMERDSLLAHGAAYLLHDRLHTASDFHVAD 798
            KFQVR+TG VD  TRQP+       GIRFGEMERDS+LAHGAAYLLHDRLHT SD H+AD
Sbjct: 1003 KFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIAD 1062

Query: 797  VCSLCGSILTTSFIEPQKKAGQAIAKVTPRGNQRKVTCHACKTSKGMEKVAMPFVFRYLA 618
            VCSLCGSILTTS I+PQK+A + I  + P    +KVTCHAC+TSKGME V+MP++FR+LA
Sbjct: 1063 VCSLCGSILTTSIIQPQKRAVREIGGLPPGRAPKKVTCHACQTSKGMETVSMPYIFRFLA 1122

Query: 617  AELAAMNVKMTLNLSAGA 564
            AELAAMN+KMTL LS GA
Sbjct: 1123 AELAAMNIKMTLQLSNGA 1140


>emb|CBI35100.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score = 1405 bits (3638), Expect = 0.0
 Identities = 704/978 (71%), Positives = 812/978 (83%), Gaps = 3/978 (0%)
 Frame = -1

Query: 3488 VTNKLYYLQSGSARLGFWVKGREFLLPIGLVLKALIDTNDHEIYASLTCCYSDIYQKGER 3309
            VT KLYYL++GSARLGFW++GRE+LLP+G+VLKALIDT DHEIY SLTCCYS+ Y+ G+ 
Sbjct: 166  VTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDHEIYESLTCCYSEKYEGGKG 225

Query: 3308 SVGTQLVGERVKIILDEVQGLSLFTRAQCIQHIGKYFQSVMDGMDDETDSSVGETVLEEY 3129
            +VGTQLVGERVKIILDEV+ LSLFTR QC+QHIG++FQ VMDG+++E+ S V + VL EY
Sbjct: 226  AVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLVMDGLENESYSIVADAVLREY 285

Query: 3128 ILVHLQSGHDKYNLLIFMLQKLFAFIDHRATEDNTDALQNHEVLQPGHLITIYLKDKLHE 2949
            I VHL + +DK+NLLIFM+QKLF+ ID  +  DN D LQN EVL PGHLITIYLK+KL E
Sbjct: 286  IFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDVLQNQEVLLPGHLITIYLKEKLQE 345

Query: 2948 WLFKARRLLQDELSKKGQKFEFGSLLDVKKVLDRNPSKSIGTAIESMLKTGRLASQNGLD 2769
            WL+KARRLLQDE++K+ + FEF SL  VKKV+D+NPS+ I  A+E+MLKTGRL +Q+GLD
Sbjct: 346  WLYKARRLLQDEINKR-KNFEFSSLAHVKKVMDKNPSRQISLAVENMLKTGRLVTQSGLD 404

Query: 2768 LQQKGGMTVQAERLNFLRFISHFRSVHRGAAFAGNRNTSVRKLLPEAWGFLCPVHTPDGE 2589
            LQQ+ GMTVQAERLNFLRF+SHFR+VHRGA+FAG R TSVRKLLPEAWGFLCPVHTPDGE
Sbjct: 405  LQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPEAWGFLCPVHTPDGE 464

Query: 2588 PCGLLNHMASTCRITSYFDSKGNIKDFFKIRLSILSVLIGVGMTPSLPKLVRAGPPEVLS 2409
            PCGLLNHMASTCRITSYFDS+GN +DFFKIR+SILSVLIG+GMTP+LPKLV+AGPPEVLS
Sbjct: 465  PCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVLIGIGMTPALPKLVQAGPPEVLS 524

Query: 2408 VLLDGCVIGSISSNMVEKAVAHIRKLKLSANSGIPDDLEVGYVPLSVGGAYPGLYLFSSP 2229
            V+LDG V+GSI S+ VE AV H+R+LK+SA S IPDDLEVGY+PLS+GGAYPGLYLF+SP
Sbjct: 525  VILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIPDDLEVGYIPLSMGGAYPGLYLFTSP 584

Query: 2228 SRFVRPV--ISLNAEKNHDIELIGPFEQVYMEIRCADGGEEGRTDDNPATHEEMHPTGLL 2055
            SRFVRPV  IS+ +E+ HDIELIGPFEQVYMEIRC DG + GR +  PATHEE+HPTG+L
Sbjct: 585  SRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIRCPDGSDGGRRNIFPATHEEIHPTGML 644

Query: 2054 SVVANLTPYSDHNQSPRNMYQCQMAKQTVGFSSQALQFRADQKLYHLQTPQTPIVRTEAY 1875
            SVVA+LTP+SDHNQSPRNMYQCQM KQT+ FSSQA+  RADQKLYHLQTPQTPIVRT AY
Sbjct: 645  SVVASLTPWSDHNQSPRNMYQCQMGKQTMAFSSQAINCRADQKLYHLQTPQTPIVRTSAY 704

Query: 1874 TKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHTSIYQLETIDLEEQSGK 1695
             KY++DEFPTGTNAIVAVLAY+GYDMEDAMILNKSSV+RG+CH  IYQ ETIDL +++ K
Sbjct: 705  VKYSMDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCHGQIYQTETIDLSDENNK 764

Query: 1694 SDHVRQIFARSNIDKSVRSSVDSDGLPYVGQVLHPGQPYCSTNNTLSGAIKEHKLKGSEP 1515
            SD  +++F RSN+DKS  S +DSDGLPYVGQ+++P +PYCS  N ++ + +  KLKGSEP
Sbjct: 765  SDRGQRMFRRSNVDKSANSLIDSDGLPYVGQMINPNEPYCSIYNEVTSSTRATKLKGSEP 824

Query: 1514 VTVDYVAVDVKHNP-PQKVXXXXXXXXXXXIGDKFSSRHGQKGVCSQLWPDIDMPFSGTT 1338
            V VDYVA+D K+   PQKV           IGDKFSSRHGQKGVCSQLWPDIDMPFSG T
Sbjct: 825  VIVDYVALDAKNKKHPQKVNIRFRRPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVT 884

Query: 1337 GMRPDLIINPHAFPSRMTIGMLLESIAAKGGCLNGKFVDATPFPSSSRKENKELPIXXXX 1158
            GMRPDLIINPHAFPSRMTI MLLES+AAKGG L+GKFVDATPF  S RK N E       
Sbjct: 885  GMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFSDSLRKANGE------- 937

Query: 1157 XXXXXXXXSLLDELGPLLTSHGFNSLGSEVLYSGVLGTELVCEIFIGPVYYQRLRHMVSD 978
                    SL+DELG +LTS+GFN  G EVLYSG  GTEL CEIFIGPVYYQRLRHMVSD
Sbjct: 938  --AGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYGTELTCEIFIGPVYYQRLRHMVSD 995

Query: 977  KFQVRNTGAVDPTTRQPMXXXXXXXGIRFGEMERDSLLAHGAAYLLHDRLHTASDFHVAD 798
            KFQVR+TG VD  TRQP+       GIRFGEMERDS+LAHGAAYLLHDRLHT SD H+AD
Sbjct: 996  KFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIAD 1055

Query: 797  VCSLCGSILTTSFIEPQKKAGQAIAKVTPRGNQRKVTCHACKTSKGMEKVAMPFVFRYLA 618
            VCSLCGSILTTS I+PQK+A                      TSKGME V+MP++FR+LA
Sbjct: 1056 VCSLCGSILTTSIIQPQKRA----------------------TSKGMETVSMPYIFRFLA 1093

Query: 617  AELAAMNVKMTLNLSAGA 564
            AELAAMN+KMTL LS GA
Sbjct: 1094 AELAAMNIKMTLQLSNGA 1111


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
            sativus]
          Length = 1173

 Score = 1379 bits (3569), Expect = 0.0
 Identities = 680/979 (69%), Positives = 804/979 (82%), Gaps = 3/979 (0%)
 Frame = -1

Query: 3488 VTNKLYYLQSGSARLGFWVKGREFLLPIGLVLKALIDTNDHEIYASLTCCYSDIYQKGER 3309
            VT KLYYL++GSARLGFWV+G+E+LLPIG+VLKALIDT DHEIYASLT CYSD + K + 
Sbjct: 203  VTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHGKSKG 262

Query: 3308 SVGTQLVGERVKIILDEVQGLSLFTRAQCIQHIGKYFQSVMDGMDDETDSSVGETVLEEY 3129
            +VGTQLVGER KIILDEV+ L+LF   QC+ HIG++FQ VM+G+  E  S+V + VL++Y
Sbjct: 263  AVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKEKFSTVADAVLKDY 322

Query: 3128 ILVHLQSGHDKYNLLIFMLQKLFAFIDHRATEDNTDALQNHEVLQPGHLITIYLKDKLHE 2949
            I VHL + +DK+NLLIFM QKLF+ ID  +  DN D+LQN +VL PG LIT+YLK+KL +
Sbjct: 323  IFVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVLLPGQLITLYLKEKLED 382

Query: 2948 WLFKARRLLQDELSKKGQKFEFGSLLDVKKVLDRNPSKSIGTAIESMLKTGRLASQNGLD 2769
            WL K ++LL+DE+S   + FEF SL  VKKV+D+NPSK + +A+E+MLKTGRL +Q GLD
Sbjct: 383  WLQKVKKLLEDEISNPSKNFEFCSLAHVKKVMDKNPSKQVSSAVENMLKTGRLVTQTGLD 442

Query: 2768 LQQKGGMTVQAERLNFLRFISHFRSVHRGAAFAGNRNTSVRKLLPEAWGFLCPVHTPDGE 2589
            LQQ+ G TVQAERLNFLRF+SHFR+VHRGA+FAG R T+VRKLLPE+WGFLCPVHTPDGE
Sbjct: 443  LQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGE 502

Query: 2588 PCGLLNHMASTCRITSYFDSKGNIKDFFKIRLSILSVLIGVGMTPSLPKLVRAGPPEVLS 2409
            PCGLLNH+ STCRITS+F+S+G ++DF+KIR SILSVLI VGM PSLPKLV+ G P+ L+
Sbjct: 503  PCGLLNHLTSTCRITSHFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQMGLPDFLN 562

Query: 2408 VLLDGCVIGSISSNMVEKAVAHIRKLKLSANSGIPDDLEVGYVPLSVGGAYPGLYLFSSP 2229
            VLLDG ++G ISSN VEK VAH+R+LK+ +   IPDDLEVGYVPLS+ GAYPGLYLF+SP
Sbjct: 563  VLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYPGLYLFTSP 622

Query: 2228 SRFVRPV--ISLNAEKNHDIELIGPFEQVYMEIRCADGGEEGRTDDNPATHEEMHPTGLL 2055
            SRFVRPV  +S++ E NH+IELIGPFEQV+MEIRC DGG+ GR D+ PATHEE+HPTG+L
Sbjct: 623  SRFVRPVKNLSISPEDNHNIELIGPFEQVFMEIRCPDGGDGGRKDEFPATHEEIHPTGML 682

Query: 2054 SVVANLTPYSDHNQSPRNMYQCQMAKQTVGFSSQALQFRADQKLYHLQTPQTPIVRTEAY 1875
            SVVANLTP+SDHNQSPRNMYQCQMAKQT+ FS QA+++RADQKLYHLQTPQTPIVRT  Y
Sbjct: 683  SVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHLQTPQTPIVRTSTY 742

Query: 1874 TKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHTSIYQLETIDLEEQSGK 1695
            TKYNIDE+PTGTNAIVAVLAYTGYDMEDAMILNKSSVERGM H  IYQ ETIDL +Q  +
Sbjct: 743  TKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNR 802

Query: 1694 SDHVRQIFARSNIDKSVRSSVDSDGLPYVGQVLHPGQPYCSTNNTLSGAIKEHKLKGSEP 1515
            S   +++F RSNID SVRS +D+DGLPYVGQ++ P +PYCS  + ++G  +  KLKGSE 
Sbjct: 803  SSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMKLKGSEA 862

Query: 1514 VTVDYVAVDVKH-NPPQKVXXXXXXXXXXXIGDKFSSRHGQKGVCSQLWPDIDMPFSGTT 1338
            V VDYV+VDVK+ N PQKV           IGDKFSSRHGQKGVCSQLWPD+DMPF G T
Sbjct: 863  VIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGAT 922

Query: 1337 GMRPDLIINPHAFPSRMTIGMLLESIAAKGGCLNGKFVDATPFPSSSRKENKELPIXXXX 1158
            GMRPDLIINPHAFPSRMTI ML+ES+AAKGGCLNG+FV+ATPF SS  K N         
Sbjct: 923  GMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVNATPFRSSVNKTN--------A 974

Query: 1157 XXXXXXXXSLLDELGPLLTSHGFNSLGSEVLYSGVLGTELVCEIFIGPVYYQRLRHMVSD 978
                    +L+DELG  L   GFN  G EVLYSGV GTEL CEIFIGPVYYQRLRHMVSD
Sbjct: 975  GDEETNGETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSD 1034

Query: 977  KFQVRNTGAVDPTTRQPMXXXXXXXGIRFGEMERDSLLAHGAAYLLHDRLHTASDFHVAD 798
            K+QVR+TG VD  TRQP+       GIRFGEMERDS+LAHGA+YLLHDRLHT SD H+AD
Sbjct: 1035 KYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIAD 1094

Query: 797  VCSLCGSILTTSFIEPQKKAGQAIAKVTPRGNQRKVTCHACKTSKGMEKVAMPFVFRYLA 618
            VCSLCGS+LT+SF++P K+A + I  + P    ++VTCHACKTSKGME VAMP+VF+YLA
Sbjct: 1095 VCSLCGSVLTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLA 1154

Query: 617  AELAAMNVKMTLNLSAGAS 561
            AELAAMN+KMTL LS+GA+
Sbjct: 1155 AELAAMNIKMTLQLSSGAA 1173


>ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis]
            gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase I
            subunit, putative [Ricinus communis]
          Length = 1159

 Score = 1378 bits (3566), Expect = 0.0
 Identities = 683/978 (69%), Positives = 803/978 (82%), Gaps = 3/978 (0%)
 Frame = -1

Query: 3488 VTNKLYYLQSGSARLGFWVKGREFLLPIGLVLKALIDTNDHEIYASLTCCYSDIYQKGER 3309
            V+ KLYYL+SGSARLGFW++GRE+LLP G+VLKAL +T D EIY  LTCCY + Y+K + 
Sbjct: 189  VSVKLYYLRSGSARLGFWIQGREYLLPAGIVLKALAETTDREIYEKLTCCYDEKYEKAKG 248

Query: 3308 SVGTQLVGERVKIILDEVQGLSLFTRAQCIQHIGKYFQSVMDGMDDETDSSVGETVLEEY 3129
            +VG+QLVGER KIILDEV+ LSLFT+++C++HIG++FQ VMDG++ ET S+V   VL++Y
Sbjct: 249  AVGSQLVGERAKIILDEVRDLSLFTQSECLRHIGEHFQPVMDGLEKETFSNVAHAVLKDY 308

Query: 3128 ILVHLQSGHDKYNLLIFMLQKLFAFIDHRATEDNTDALQNHEVLQPGHLITIYLKDKLHE 2949
            I VHL +  DK+NLLIFMLQKLF+ +D  +  DN D+LQN EVL PGHL+TIYLK+KL E
Sbjct: 309  IFVHLNNYDDKFNLLIFMLQKLFSLVDQTSVVDNPDSLQNQEVLLPGHLVTIYLKEKLEE 368

Query: 2948 WLFKARRLLQDELSKKGQKFEFGSLLDVKKVLDRNPSKSIGTAIESMLKTGRLASQNGLD 2769
            WL KA+++LQ+E++K    F F S+LDVKKV+D+NPS +I  A+E+MLKTGRL +Q GLD
Sbjct: 369  WLRKAKKVLQEEIAKNNN-FNFLSVLDVKKVIDKNPSTTISLAVENMLKTGRLVTQTGLD 427

Query: 2768 LQQKGGMTVQAERLNFLRFISHFRSVHRGAAFAGNRNTSVRKLLPEAWGFLCPVHTPDGE 2589
            LQQ+ G TVQAERLNFLRF+S FR+VHRGA+FAG R TSVRKLLPE+WGFLCPVHTPDGE
Sbjct: 428  LQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGE 487

Query: 2588 PCGLLNHMASTCRITSYFDSKGNIKDFFKIRLSILSVLIGVGMTPSLPKLVRAGPPEVLS 2409
            PCGLLNHM  +CRITSYFDS+G +KDFF IR SIL VL  +GMT SLPKLV+AGPP+VLS
Sbjct: 488  PCGLLNHMTRSCRITSYFDSQGAVKDFFDIRKSILGVLTSLGMTSSLPKLVQAGPPQVLS 547

Query: 2408 VLLDGCVIGSISSNMVEKAVAHIRKLKLSANSGIPDDLEVGYVPLSVGGAYPGLYLFSSP 2229
            VLLDG V+GSI S+ VEK V H+R+LK++A+S IPDDLEVGYVPLS+GGA+PGLYLF+SP
Sbjct: 548  VLLDGRVVGSIPSSQVEKVVVHLRRLKVAASSVIPDDLEVGYVPLSMGGAFPGLYLFTSP 607

Query: 2228 SRFVRPV--ISLNAEKNHDIELIGPFEQVYMEIRCADGGEEGRTDDNPATHEEMHPTGLL 2055
            SRF+RPV  IS+ A +  +IELIGPFEQV+MEIRC DGG  GR+D  PATHEE+HPT +L
Sbjct: 608  SRFIRPVKNISIPAGEGENIELIGPFEQVFMEIRCPDGGNGGRSDAFPATHEEIHPTDML 667

Query: 2054 SVVANLTPYSDHNQSPRNMYQCQMAKQTVGFSSQALQFRADQKLYHLQTPQTPIVRTEAY 1875
            SVVANLTP+SDHNQSPRNMYQCQMAKQT+ FS Q+L+FRADQKLYHLQTPQTPIVRT +Y
Sbjct: 668  SVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQSLRFRADQKLYHLQTPQTPIVRTSSY 727

Query: 1874 TKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHTSIYQLETIDLEEQSGK 1695
            TKY +DE+PTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCH  IYQ ETIDL E+  +
Sbjct: 728  TKYCVDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGQIYQTETIDLSEEGSR 787

Query: 1694 SDHVRQIFARSNIDKSVRSSVDSDGLPYVGQVLHPGQPYCSTNNTLSGAIKEHKLKGSEP 1515
            SD  +++F RSNIDKS+ S +DSDGLPYVGQ++HP +PYCS  N ++   + +  KGS+P
Sbjct: 788  SDRAQRMFRRSNIDKSLHSVIDSDGLPYVGQMIHPNEPYCSIYNEITNTTRTNNRKGSDP 847

Query: 1514 VTVDYVAVDVKHNPP-QKVXXXXXXXXXXXIGDKFSSRHGQKGVCSQLWPDIDMPFSGTT 1338
            V VDYVA+D K+    QKV           IGDKFSSRHGQKGVCSQLWPDIDMPFSG T
Sbjct: 848  VIVDYVAIDTKNKKHLQKVNIRFRHPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVT 907

Query: 1337 GMRPDLIINPHAFPSRMTIGMLLESIAAKGGCLNGKFVDATPFPSSSRKENKELPIXXXX 1158
            GMRPDLIINPHAFPSRMTI MLLES+AAKGG LNGKFVDATPF SS +  N         
Sbjct: 908  GMRPDLIINPHAFPSRMTIAMLLESLAAKGGSLNGKFVDATPFTSSVKNVN--------G 959

Query: 1157 XXXXXXXXSLLDELGPLLTSHGFNSLGSEVLYSGVLGTELVCEIFIGPVYYQRLRHMVSD 978
                    SL+D+LG +L SHGFN  G EVLYSGV GTEL CEIFIGPVYYQRLRHMVSD
Sbjct: 960  GEAKSESESLVDDLGNMLRSHGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSD 1019

Query: 977  KFQVRNTGAVDPTTRQPMXXXXXXXGIRFGEMERDSLLAHGAAYLLHDRLHTASDFHVAD 798
            KFQVR+TG VD  TRQP+       GIRFGEMERD++LAHGAAYLLHDRLHT SD+H+AD
Sbjct: 1020 KFQVRSTGTVDQITRQPIKGRKRGGGIRFGEMERDAMLAHGAAYLLHDRLHTCSDYHIAD 1079

Query: 797  VCSLCGSILTTSFIEPQKKAGQAIAKVTPRGNQRKVTCHACKTSKGMEKVAMPFVFRYLA 618
            VCSLCGSILTTSFI+ QK+  + I  + P G  +KV CH+C+TSKGME VAMP+VFRYLA
Sbjct: 1080 VCSLCGSILTTSFIQTQKRVVRDIGGLPPVGAPKKVACHSCQTSKGMETVAMPYVFRYLA 1139

Query: 617  AELAAMNVKMTLNLSAGA 564
            AELAAMN+KM + LS GA
Sbjct: 1140 AELAAMNIKMNVQLSGGA 1157


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Glycine
            max]
          Length = 1175

 Score = 1365 bits (3533), Expect = 0.0
 Identities = 678/975 (69%), Positives = 800/975 (82%), Gaps = 3/975 (0%)
 Frame = -1

Query: 3479 KLYYLQSGSARLGFWVKGREFLLPIGLVLKALIDTNDHEIYASLTCCYSDIYQKGERSVG 3300
            +LYYL++GSARLGFW++GRE+LLP+G++LKALIDT D EIY +LT CY++ Y+KG+ +VG
Sbjct: 206  RLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVNLTSCYNEKYEKGKGAVG 265

Query: 3299 TQLVGERVKIILDEVQGLSLFTRAQCIQHIGKYFQSVMDGMDDETDSSVGETVLEEYILV 3120
            TQLVGER KIILDE++ LSLFTR QC+++IG++FQ VM+ + +++   V + VL++ ILV
Sbjct: 266  TQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVMNELKNDSYPIVADAVLKDCILV 325

Query: 3119 HLQSGHDKYNLLIFMLQKLFAFIDHRATEDNTDALQNHEVLQPGHLITIYLKDKLHEWLF 2940
            HL +  DK+NLLIFMLQKLF+ ID  +  DN D+LQNHEVL PGHLIT+YLK+KL +WL 
Sbjct: 326  HLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLPGHLITLYLKEKLEDWLQ 385

Query: 2939 KARRLLQDELSKKGQKFEFGSLLDVKKVLDRNPSKSIGTAIESMLKTGRLASQNGLDLQQ 2760
            K RRLL DE+ KK +KF+F  ++ VKKV+D+N  K + TA+E+MLKTGRL +Q GLDLQQ
Sbjct: 386  KGRRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVENMLKTGRLVTQTGLDLQQ 445

Query: 2759 KGGMTVQAERLNFLRFISHFRSVHRGAAFAGNRNTSVRKLLPEAWGFLCPVHTPDGEPCG 2580
            + G TVQAERLNFLRF+SHFR+VHRGA+FAG R T+VRKLLPE+WGFLCPVHTPDGEPCG
Sbjct: 446  RAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCG 505

Query: 2579 LLNHMASTCRITSYFDSKGNIKDFFKIRLSILSVLIGVGMTPSLPKLVRAGPPEVLSVLL 2400
            LLNHM  T RITS+FDS+GNIKD+FKI++SIL+VL+ VGMTPSLPK+   GPPE L+VLL
Sbjct: 506  LLNHMTCTSRITSFFDSQGNIKDYFKIKMSILNVLLEVGMTPSLPKIFLPGPPEALTVLL 565

Query: 2399 DGCVIGSISSNMVEKAVAHIRKLKLSANSGIPDDLEVGYVPLSVGGAYPGLYLFSSPSRF 2220
            DGCV+G I+S+ VEK VAHIR+LK+S+ + IPDD+EVGYVPLS+GGAYPGLYL +SPSRF
Sbjct: 566  DGCVVGCIASSEVEKVVAHIRELKVSSVAVIPDDMEVGYVPLSMGGAYPGLYLCTSPSRF 625

Query: 2219 VRPV--ISLNAEKNHDIELIGPFEQVYMEIRCADGGEEGRTDDNPATHEEMHPTGLLSVV 2046
            VRPV  IS+ ++ + +IELIGPFEQV+MEIRC DGG+ GR    PATHEE+HPT +LSVV
Sbjct: 626  VRPVRNISIASDGSENIELIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTVMLSVV 685

Query: 2045 ANLTPYSDHNQSPRNMYQCQMAKQTVGFSSQALQFRADQKLYHLQTPQTPIVRTEAYTKY 1866
            ANLTP+SDHNQSPRNMYQCQMAKQT+ FSSQ +Q RADQKLYHLQTPQTPIVRT  YTKY
Sbjct: 686  ANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKY 745

Query: 1865 NIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHTSIYQLETIDLEEQSGKSDH 1686
            NIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGM H  IYQ ETIDL EQ G+SD 
Sbjct: 746  NIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLTEQGGRSDR 805

Query: 1685 VRQIFARSNIDKSVRSSVDSDGLPYVGQVLHPGQPYCSTNNTLSGAIKEHKLKGSEPVTV 1506
              ++F +SNI+KS   S+DSDGLP+VGQ++ P +PYCS  N ++ +I   K KGSE V V
Sbjct: 806  SSRMFRKSNIEKSACPSIDSDGLPHVGQMIRPDEPYCSIYNEVTSSIHTLKRKGSEAVYV 865

Query: 1505 DYVAVDVKHNPP-QKVXXXXXXXXXXXIGDKFSSRHGQKGVCSQLWPDIDMPFSGTTGMR 1329
            DYVA DVK+    QKV           IGDKFSSRHGQKGVCSQLWPD+DMPFSGTTGMR
Sbjct: 866  DYVAADVKNKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFSGTTGMR 925

Query: 1328 PDLIINPHAFPSRMTIGMLLESIAAKGGCLNGKFVDATPFPSSSRKENKELPIXXXXXXX 1149
            PDLIINPHAFPSRMTI MLLES+AAKGG L G+FVDATPF SS  K++ E          
Sbjct: 926  PDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFRSSVTKDSGE---------S 976

Query: 1148 XXXXXSLLDELGPLLTSHGFNSLGSEVLYSGVLGTELVCEIFIGPVYYQRLRHMVSDKFQ 969
                 SL+D+LG LL   GFN  G EVLYSGV GTEL CEIFIGPVYYQRLRHMVSDKFQ
Sbjct: 977  DSKSGSLVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQ 1036

Query: 968  VRNTGAVDPTTRQPMXXXXXXXGIRFGEMERDSLLAHGAAYLLHDRLHTASDFHVADVCS 789
            VR+TG +D  TRQP+       GIRFGEMERDSLLAHGAAYLLHDRLHT SD+H+ADVCS
Sbjct: 1037 VRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCS 1096

Query: 788  LCGSILTTSFIEPQKKAGQAIAKVTPRGNQRKVTCHACKTSKGMEKVAMPFVFRYLAAEL 609
            LCGS+L T+FI+PQK+  + I  + P    +KVTCHAC+TSKGME VAMP+VFRYLAAEL
Sbjct: 1097 LCGSMLATTFIQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYLAAEL 1156

Query: 608  AAMNVKMTLNLSAGA 564
            AAMN+KMTL LS GA
Sbjct: 1157 AAMNIKMTLKLSDGA 1171