BLASTX nr result

ID: Coptis25_contig00004417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004417
         (1402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273888.1| PREDICTED: uncharacterized protein LOC100247...   408   e-111
ref|XP_002527768.1| conserved hypothetical protein [Ricinus comm...   404   e-110
ref|XP_004169936.1| PREDICTED: uncharacterized LOC101218160 [Cuc...   384   e-104
ref|XP_004147200.1| PREDICTED: uncharacterized protein LOC101218...   383   e-104
ref|XP_002310420.1| predicted protein [Populus trichocarpa] gi|2...   376   e-102

>ref|XP_002273888.1| PREDICTED: uncharacterized protein LOC100247465 [Vitis vinifera]
            gi|296084247|emb|CBI24635.3| unnamed protein product
            [Vitis vinifera]
          Length = 370

 Score =  408 bits (1049), Expect = e-111
 Identities = 206/317 (64%), Positives = 231/317 (72%), Gaps = 1/317 (0%)
 Frame = +1

Query: 157  DPWSNPTPPHPSEGSGFSWDSVSSWDTGLTRGHFDGQAIGRQVDXXXXXXXXXXXXXXXX 336
            D W   TP  P++     WD  SSW TGLT+ HFDG+A+GRQ+D                
Sbjct: 60   DQWGK-TPETPND---LGWDVESSWSTGLTKDHFDGEAVGRQIDSTAACSEGGGPPRTVL 115

Query: 337  XXXXKSLVSNVDVEFERESRKSRMFVGTWDERMNEVDYLLKQVHEPGARGSYLKDSEKVE 516
                +  + +   E E E+RK + +V  W ERM  +  LLKQV EPGARGSYLKDSEK E
Sbjct: 116  REMDE--LDSKLAELEAENRKGKAYVDGWGERMRNMSVLLKQVREPGARGSYLKDSEKAE 173

Query: 517  MYKLFKENPDVYTVEKLAKDYRIMRQRVHAILWLKEDEEEMEKRLG-PLDDSVELLLDTC 693
            MY+L KENP+VYTVEKLAKDYRIMRQRVHAILWLKE EEE EK+LG PLDDSVELLLDTC
Sbjct: 174  MYRLHKENPEVYTVEKLAKDYRIMRQRVHAILWLKELEEEEEKKLGHPLDDSVELLLDTC 233

Query: 694  PEFFNSHDREFHVASLPYKPEFKVMPEGWDGTTRDPDEVHYEISMREDEILYQEFVRRMN 873
            PEFFNSHDREFHVASLPYKP+FKVMPEGWDGTTRDPDEVH+EIS +EDE+LYQEFV++MN
Sbjct: 234  PEFFNSHDREFHVASLPYKPDFKVMPEGWDGTTRDPDEVHHEISQKEDEMLYQEFVQKMN 293

Query: 874  FNKMKIAGEVKCHKYSRRRSDKGWNFTVEKLXXXXXXXXXXXWKFVSLPDGSSRPLNEME 1053
            FNK K+AGEVKCHKYSRRRS +GWN  VEKL           WKF+S PDGSSRPLNEME
Sbjct: 294  FNKKKMAGEVKCHKYSRRRSAEGWNIMVEKLGPQGKRGNGGGWKFISQPDGSSRPLNEME 353

Query: 1054 KMYXXXXXXXXXXKIQP 1104
            KMY          KI P
Sbjct: 354  KMYVKRETLRRRRKILP 370


>ref|XP_002527768.1| conserved hypothetical protein [Ricinus communis]
            gi|223532855|gb|EEF34629.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 400

 Score =  404 bits (1038), Expect = e-110
 Identities = 199/306 (65%), Positives = 227/306 (74%), Gaps = 1/306 (0%)
 Frame = +1

Query: 190  SEGSGFSWDSVSSWDTGLTRGHFDGQAIGRQVDXXXXXXXXXXXXXXXXXXXXKSLVSNV 369
            S      WDS SSW TG+T+ HFDGQ +G+Q D                    + +   +
Sbjct: 96   SGSDDLGWDSASSWSTGMTKDHFDGQLVGQQTDSSSNVGGGLNASETALVSSLQEIDDKM 155

Query: 370  DVEFERESRKSRMFVGTWDERMNEVDYLLKQVHEPGARGSYLKDSEKVEMYKLFKENPDV 549
              E E E++K++ FV  W E+M E+  LLKQV EPGARGSYLKDSEK EMY+L KENP+V
Sbjct: 156  R-ELEAENKKAKAFVDGWGEKMREMSVLLKQVREPGARGSYLKDSEKAEMYRLHKENPEV 214

Query: 550  YTVEKLAKDYRIMRQRVHAILWLKEDEEEMEKRLG-PLDDSVELLLDTCPEFFNSHDREF 726
            YTVE+LAKDYRIMRQRVHAILWLKE EEE EK+LG PLDDSVELLLDTCPEFF SHD+EF
Sbjct: 215  YTVERLAKDYRIMRQRVHAILWLKELEEEEEKKLGHPLDDSVELLLDTCPEFFKSHDQEF 274

Query: 727  HVASLPYKPEFKVMPEGWDGTTRDPDEVHYEISMREDEILYQEFVRRMNFNKMKIAGEVK 906
            HVASLPYKP+FKVMPEGWDGT +D DEVHYEISM+EDE+LYQEFV++MNFNKMK+AG+VK
Sbjct: 275  HVASLPYKPDFKVMPEGWDGTIKDLDEVHYEISMKEDEMLYQEFVQKMNFNKMKMAGQVK 334

Query: 907  CHKYSRRRSDKGWNFTVEKLXXXXXXXXXXXWKFVSLPDGSSRPLNEMEKMYXXXXXXXX 1086
            CHKYSRRRS +GWNFTVEK+           WKFVSLPDGSSRPLNE EKMY        
Sbjct: 335  CHKYSRRRSSEGWNFTVEKMGSRGKRGGGGGWKFVSLPDGSSRPLNETEKMYVRRETPRR 394

Query: 1087 XXKIQP 1104
              KI P
Sbjct: 395  RRKILP 400


>ref|XP_004169936.1| PREDICTED: uncharacterized LOC101218160 [Cucumis sativus]
          Length = 383

 Score =  384 bits (986), Expect = e-104
 Identities = 198/305 (64%), Positives = 220/305 (72%), Gaps = 7/305 (2%)
 Frame = +1

Query: 211  WDSVSSWDTGLTRGHFDGQAIGRQVDXXXXXXXXXXXXXXXXXXXXKSLVSNVDV----- 375
            WDS SSW TGLT+ HFDG+A+GR+                       SLVS +       
Sbjct: 90   WDSASSWSTGLTKEHFDGEAVGRRASGGGNSESPQ-----------SSLVSGLQEFEDKV 138

Query: 376  -EFERESRKSRMFVGTWDERMNEVDYLLKQVHEPGARGSYLKDSEKVEMYKLFKENPDVY 552
             E E E+RKS+++V  W ERM E   LLKQV EPGARGSYLKDSEK EMY+L KENP+VY
Sbjct: 139  RELEAENRKSKVYVDKWGERMRETSILLKQVKEPGARGSYLKDSEKAEMYRLHKENPEVY 198

Query: 553  TVEKLAKDYRIMRQRVHAILWLKEDEEEMEKRLG-PLDDSVELLLDTCPEFFNSHDREFH 729
            T+EKLAKDYRIMRQRVHAILWLKE EEE EK+LG PLDDSVELLLD  PEFF SHDREFH
Sbjct: 199  TIEKLAKDYRIMRQRVHAILWLKELEEEEEKKLGHPLDDSVELLLDNFPEFFKSHDREFH 258

Query: 730  VASLPYKPEFKVMPEGWDGTTRDPDEVHYEISMREDEILYQEFVRRMNFNKMKIAGEVKC 909
            VASLPYKP+FKVMPEGWDGTTRD DEVHYEIS +EDE+LYQEFV ++NFNK K+AGEV  
Sbjct: 259  VASLPYKPDFKVMPEGWDGTTRDLDEVHYEISQKEDEMLYQEFVEKLNFNKKKVAGEVFR 318

Query: 910  HKYSRRRSDKGWNFTVEKLXXXXXXXXXXXWKFVSLPDGSSRPLNEMEKMYXXXXXXXXX 1089
            HKYSRRR+  GW FT+EKL            KFVSLP+GSSRPLNEMEKMY         
Sbjct: 319  HKYSRRRATDGWKFTIEKLGPRGKQGSGGGRKFVSLPNGSSRPLNEMEKMYVRRETPRHR 378

Query: 1090 XKIQP 1104
             KI P
Sbjct: 379  RKILP 383


>ref|XP_004147200.1| PREDICTED: uncharacterized protein LOC101218160 [Cucumis sativus]
          Length = 383

 Score =  383 bits (984), Expect = e-104
 Identities = 198/305 (64%), Positives = 219/305 (71%), Gaps = 7/305 (2%)
 Frame = +1

Query: 211  WDSVSSWDTGLTRGHFDGQAIGRQVDXXXXXXXXXXXXXXXXXXXXKSLVSNVDV----- 375
            WDS SSW TGLT+ HFDG+A+GR+                       SLVS +       
Sbjct: 90   WDSASSWSTGLTKEHFDGEAVGRRASGGGNSESPQ-----------SSLVSGLQEFEDKV 138

Query: 376  -EFERESRKSRMFVGTWDERMNEVDYLLKQVHEPGARGSYLKDSEKVEMYKLFKENPDVY 552
             E E E+RKS+++V  W ERM E   LLKQV EPGARGSYLKDSEK EMY+L KENP+VY
Sbjct: 139  RELEAENRKSKVYVDKWGERMRETSILLKQVKEPGARGSYLKDSEKAEMYRLHKENPEVY 198

Query: 553  TVEKLAKDYRIMRQRVHAILWLKEDEEEMEKRLG-PLDDSVELLLDTCPEFFNSHDREFH 729
            T+EKLAKDYRIMRQRVHAILWLKE EEE EK+LG PLDDSVELLLD  PEFF SHDREFH
Sbjct: 199  TIEKLAKDYRIMRQRVHAILWLKELEEEEEKKLGHPLDDSVELLLDNFPEFFKSHDREFH 258

Query: 730  VASLPYKPEFKVMPEGWDGTTRDPDEVHYEISMREDEILYQEFVRRMNFNKMKIAGEVKC 909
            VASLPYKP+FKVMPEGWDGTTRD DEVHYEIS +EDE+LYQEFV ++NFNK K+AGEV  
Sbjct: 259  VASLPYKPDFKVMPEGWDGTTRDLDEVHYEISQKEDEMLYQEFVEKLNFNKKKVAGEVFR 318

Query: 910  HKYSRRRSDKGWNFTVEKLXXXXXXXXXXXWKFVSLPDGSSRPLNEMEKMYXXXXXXXXX 1089
            HKYSRRR   GW FT+EKL            KFVSLP+GSSRPLNEMEKMY         
Sbjct: 319  HKYSRRRDADGWKFTIEKLGPRGKQGSGGGRKFVSLPNGSSRPLNEMEKMYVRRETPRHR 378

Query: 1090 XKIQP 1104
             KI P
Sbjct: 379  RKILP 383


>ref|XP_002310420.1| predicted protein [Populus trichocarpa] gi|222853323|gb|EEE90870.1|
            predicted protein [Populus trichocarpa]
          Length = 397

 Score =  376 bits (966), Expect = e-102
 Identities = 186/298 (62%), Positives = 218/298 (73%), Gaps = 7/298 (2%)
 Frame = +1

Query: 190  SEGSGFSWDSVSSWDTGLTRGHFDG-QAIGRQVDXXXXXXXXXXXXXXXXXXXXKSLVSN 366
            ++G G  W + SSW TGLT+ HFDG + +G++                            
Sbjct: 84   TDGDGLGWGAASSWSTGLTKDHFDGVEVVGQRTSSSSTDSGKDGGDGMKDTSQYAMAYDL 143

Query: 367  VDV-----EFERESRKSRMFVGTWDERMNEVDYLLKQVHEPGARGSYLKDSEKVEMYKLF 531
             D      E+E E+++S  FV  W++R++E+  L+ Q+ EPG RGSYLKDSEK EMY+L 
Sbjct: 144  QDTEDWIREYESENKRSAAFVAGWNKRIDELKVLMDQIKEPGLRGSYLKDSEKAEMYRLH 203

Query: 532  KENPDVYTVEKLAKDYRIMRQRVHAILWLKEDEEEMEKRLG-PLDDSVELLLDTCPEFFN 708
            KENP+VYTVEKL+KDYRIMRQRVHAILWLKE EEE EK+LG PLDDS+ELLLD  PEFF 
Sbjct: 204  KENPEVYTVEKLSKDYRIMRQRVHAILWLKEIEEEEEKKLGHPLDDSIELLLDKFPEFFK 263

Query: 709  SHDREFHVASLPYKPEFKVMPEGWDGTTRDPDEVHYEISMREDEILYQEFVRRMNFNKMK 888
            SHDREFHVASL YKPEFKVMPEGWDGT +D DEVHYEIS +EDEILYQEFV RMNFNKMK
Sbjct: 264  SHDREFHVASLTYKPEFKVMPEGWDGTIKDMDEVHYEISKKEDEILYQEFVLRMNFNKMK 323

Query: 889  IAGEVKCHKYSRRRSDKGWNFTVEKLXXXXXXXXXXXWKFVSLPDGSSRPLNEMEKMY 1062
            +AG+VKCHKYSRRR+ +GWNFTVEKL           WKFVSLPDGSSRPLN+ EK+Y
Sbjct: 324  LAGQVKCHKYSRRRTSQGWNFTVEKLGKKGKRGGGGGWKFVSLPDGSSRPLNDTEKIY 381


Top