BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004408
         (1620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281257.2| PREDICTED: nuclear pore complex protein Nup1...   528   e-147
emb|CBI26833.3| unnamed protein product [Vitis vinifera]              528   e-147
ref|XP_002526002.1| protein with unknown function [Ricinus commu...   520   e-145
ref|XP_003630944.1| Nuclear pore complex protein Nup155 [Medicag...   473   e-131
ref|XP_003530891.1| PREDICTED: nuclear pore complex protein Nup1...   470   e-130

>ref|XP_002281257.2| PREDICTED: nuclear pore complex protein Nup155-like [Vitis vinifera]
          Length = 1496

 Score =  528 bits (1361), Expect = e-147
 Identities = 280/410 (68%), Positives = 320/410 (78%), Gaps = 5/410 (1%)
 Frame = +2

Query: 5    SRDKYIRQIVQLGVQSPDRLFHEHLYRTMIDXXXXXXXXXXXXPDLVPFLQNAGRQPIQE 184
            SRDKYIRQIVQLGVQS DR+FHE+LYRTMID            PDLVPFLQNAGR+ +QE
Sbjct: 1028 SRDKYIRQIVQLGVQSSDRVFHEYLYRTMIDLGLENELLEYGGPDLVPFLQNAGRESLQE 1087

Query: 185  VRAVSAVTSAPS---LAGHSITTSESKYFELLARYYVLKRQHXXXXXXXXXXXXXXSTDS 355
            VRAVS++TS  S   L G  I ++++KYF+LLARYYVLKRQH              STD+
Sbjct: 1088 VRAVSSITSTRSPVGLFGAPIPSNQTKYFDLLARYYVLKRQHVLAAHVLLRLAERRSTDA 1147

Query: 356  GDVPTLEQRRQYLSNAVLQAKNASSGDGLLGSARGAFDSGLLEMLEGKLAVLQFQIKIKE 535
            GDVPTLEQRRQYLSNAVLQAKNAS+ DGL+GS RGA D+GLL++LEGKLAVL+FQIKIK 
Sbjct: 1148 GDVPTLEQRRQYLSNAVLQAKNASNSDGLVGSVRGASDNGLLDLLEGKLAVLRFQIKIKG 1207

Query: 536  ELEAMASRVEGSSDMFDS--NPNDPQRPPTVDTNLANAAQEKAKELSLDLKSLTILYNDY 709
            ELEA+ASR+E S+   +S  N +  +     DTN AN  QEKA+E+SLDLKS+T LYN+Y
Sbjct: 1208 ELEAIASRLESSNVTSESVLNESCSESNLNADTNFANTVQEKAREISLDLKSITQLYNEY 1267

Query: 710  ALPFELWEVCLEILYFASYSGDADSSIVRETWARLIDQALSSGGIAEACTVLKRVGSHVY 889
            A+PFELWE+CLE+LYFA+YSGDADSSIVRETWARLIDQALS GGIAEAC+VLKRVGSH+Y
Sbjct: 1268 AVPFELWEICLEMLYFANYSGDADSSIVRETWARLIDQALSKGGIAEACSVLKRVGSHIY 1327

Query: 890  PGDGAGLPLDTLCLQLEKAALERLASGVELVGDEDVARALLAVCKGAAEPVLSTYDQFLS 1069
            PGDGA LPLDTLCL LEKAALERLASGVE VGDEDV RALLA CKGA EPVL+TY+Q LS
Sbjct: 1328 PGDGAVLPLDTLCLHLEKAALERLASGVEPVGDEDVVRALLAACKGATEPVLNTYEQLLS 1387

Query: 1070 SGTXXXXXXXXXXXXXXXXXXXXEWAMSVLSQRMGTNATGASLILNGSFS 1219
            +G                     EWAMSV +QRMGT+ATGASLIL G+FS
Sbjct: 1388 NGAILPSPNLRLRLLRSVLVVLREWAMSVFAQRMGTSATGASLILGGAFS 1437


>emb|CBI26833.3| unnamed protein product [Vitis vinifera]
          Length = 753

 Score =  528 bits (1361), Expect = e-147
 Identities = 280/410 (68%), Positives = 320/410 (78%), Gaps = 5/410 (1%)
 Frame = +2

Query: 5    SRDKYIRQIVQLGVQSPDRLFHEHLYRTMIDXXXXXXXXXXXXPDLVPFLQNAGRQPIQE 184
            SRDKYIRQIVQLGVQS DR+FHE+LYRTMID            PDLVPFLQNAGR+ +QE
Sbjct: 270  SRDKYIRQIVQLGVQSSDRVFHEYLYRTMIDLGLENELLEYGGPDLVPFLQNAGRESLQE 329

Query: 185  VRAVSAVTSAPS---LAGHSITTSESKYFELLARYYVLKRQHXXXXXXXXXXXXXXSTDS 355
            VRAVS++TS  S   L G  I ++++KYF+LLARYYVLKRQH              STD+
Sbjct: 330  VRAVSSITSTRSPVGLFGAPIPSNQTKYFDLLARYYVLKRQHVLAAHVLLRLAERRSTDA 389

Query: 356  GDVPTLEQRRQYLSNAVLQAKNASSGDGLLGSARGAFDSGLLEMLEGKLAVLQFQIKIKE 535
            GDVPTLEQRRQYLSNAVLQAKNAS+ DGL+GS RGA D+GLL++LEGKLAVL+FQIKIK 
Sbjct: 390  GDVPTLEQRRQYLSNAVLQAKNASNSDGLVGSVRGASDNGLLDLLEGKLAVLRFQIKIKG 449

Query: 536  ELEAMASRVEGSSDMFDS--NPNDPQRPPTVDTNLANAAQEKAKELSLDLKSLTILYNDY 709
            ELEA+ASR+E S+   +S  N +  +     DTN AN  QEKA+E+SLDLKS+T LYN+Y
Sbjct: 450  ELEAIASRLESSNVTSESVLNESCSESNLNADTNFANTVQEKAREISLDLKSITQLYNEY 509

Query: 710  ALPFELWEVCLEILYFASYSGDADSSIVRETWARLIDQALSSGGIAEACTVLKRVGSHVY 889
            A+PFELWE+CLE+LYFA+YSGDADSSIVRETWARLIDQALS GGIAEAC+VLKRVGSH+Y
Sbjct: 510  AVPFELWEICLEMLYFANYSGDADSSIVRETWARLIDQALSKGGIAEACSVLKRVGSHIY 569

Query: 890  PGDGAGLPLDTLCLQLEKAALERLASGVELVGDEDVARALLAVCKGAAEPVLSTYDQFLS 1069
            PGDGA LPLDTLCL LEKAALERLASGVE VGDEDV RALLA CKGA EPVL+TY+Q LS
Sbjct: 570  PGDGAVLPLDTLCLHLEKAALERLASGVEPVGDEDVVRALLAACKGATEPVLNTYEQLLS 629

Query: 1070 SGTXXXXXXXXXXXXXXXXXXXXEWAMSVLSQRMGTNATGASLILNGSFS 1219
            +G                     EWAMSV +QRMGT+ATGASLIL G+FS
Sbjct: 630  NGAILPSPNLRLRLLRSVLVVLREWAMSVFAQRMGTSATGASLILGGAFS 679


>ref|XP_002526002.1| protein with unknown function [Ricinus communis]
            gi|223534734|gb|EEF36426.1| protein with unknown function
            [Ricinus communis]
          Length = 1490

 Score =  520 bits (1339), Expect = e-145
 Identities = 275/409 (67%), Positives = 311/409 (76%), Gaps = 3/409 (0%)
 Frame = +2

Query: 5    SRDKYIRQIVQLGVQSPDRLFHEHLYRTMIDXXXXXXXXXXXXPDLVPFLQNAGRQPIQE 184
            SR KYI QIVQLGVQSPDRLFHE+LYRTMID            PDLVPFLQNAGR+ +QE
Sbjct: 1024 SRRKYISQIVQLGVQSPDRLFHEYLYRTMIDLGLENELLEYGGPDLVPFLQNAGRETLQE 1083

Query: 185  VRAVSAVTSAPSLAGHS---ITTSESKYFELLARYYVLKRQHXXXXXXXXXXXXXXSTDS 355
            VRAV+AVTSA S  GHS   +T +++KYF+LLARYYV KRQH              STD+
Sbjct: 1084 VRAVTAVTSATSSIGHSGAPVTANQAKYFDLLARYYVSKRQHMLAAHILLRLAERRSTDA 1143

Query: 356  GDVPTLEQRRQYLSNAVLQAKNASSGDGLLGSARGAFDSGLLEMLEGKLAVLQFQIKIKE 535
             DVPTLEQRRQYLSNAVLQAKNAS   GL+GS +GA DSGLL++LEGKL VL+FQIKIK+
Sbjct: 1144 RDVPTLEQRRQYLSNAVLQAKNASDSGGLVGSMKGALDSGLLDLLEGKLVVLRFQIKIKD 1203

Query: 536  ELEAMASRVEGSSDMFDSNPNDPQRPPTVDTNLANAAQEKAKELSLDLKSLTILYNDYAL 715
            ELEA+ASR+E SS M +   N        + + A  A+EKAKELSLDLKS+T LYN+YA+
Sbjct: 1204 ELEAIASRLESSSSMSEPVQNGSVPDNNANPDYAKVAREKAKELSLDLKSITQLYNEYAV 1263

Query: 716  PFELWEVCLEILYFASYSGDADSSIVRETWARLIDQALSSGGIAEACTVLKRVGSHVYPG 895
            PFELWE+CLE+LYFA+Y+GD DSSIVRETWARLIDQALS GGIAEAC+VLKRVGSH+YPG
Sbjct: 1264 PFELWEICLEMLYFANYTGDTDSSIVRETWARLIDQALSRGGIAEACSVLKRVGSHIYPG 1323

Query: 896  DGAGLPLDTLCLQLEKAALERLASGVELVGDEDVARALLAVCKGAAEPVLSTYDQFLSSG 1075
            DGA LPLDTLCL LEKAALERL SG E VGDEDVARALLA CKGA EPVL+ YDQ LS+G
Sbjct: 1324 DGAILPLDTLCLHLEKAALERLESGAEPVGDEDVARALLAACKGATEPVLNAYDQLLSNG 1383

Query: 1076 TXXXXXXXXXXXXXXXXXXXXEWAMSVLSQRMGTNATGASLILNGSFSQ 1222
                                 EWAMSVL+QRMGT  +GASLIL G+FSQ
Sbjct: 1384 AILPSPNLRLRLLQSLLVVLREWAMSVLAQRMGTTTSGASLILGGTFSQ 1432


>ref|XP_003630944.1| Nuclear pore complex protein Nup155 [Medicago truncatula]
            gi|355524966|gb|AET05420.1| Nuclear pore complex protein
            Nup155 [Medicago truncatula]
          Length = 1484

 Score =  473 bits (1217), Expect = e-131
 Identities = 253/411 (61%), Positives = 298/411 (72%), Gaps = 6/411 (1%)
 Frame = +2

Query: 5    SRDKYIRQIVQLGVQSPDRLFHEHLYRTMIDXXXXXXXXXXXXPDLVPFLQNAGRQPIQE 184
            SR KYI QIVQLGVQSPDR+FHE+LY+ MID            PDL+PFL++AGR PI E
Sbjct: 1022 SRKKYISQIVQLGVQSPDRIFHEYLYQAMIDLGLENELLEYGGPDLLPFLKSAGRTPIHE 1081

Query: 185  VRAVSAVTSAPSLAGHSITTSESKYFELLARYYVLKRQHXXXXXXXXXXXXXXSTDSGDV 364
            VRAV+A TS    +G  +++++ KYFELLARYYVLKRQH              STD   V
Sbjct: 1082 VRAVTATTSPMGQSGAPMSSNQVKYFELLARYYVLKRQHMLAAHALLRLAGRPSTDG--V 1139

Query: 365  PTLEQRRQYLSNAVLQAKNASSGDGLLGSARGAFDSGLLEMLEGKLAVLQFQIKIKEELE 544
            PTLEQR QYLSNAVLQAKNA++ DGL+ S R + D+GLL+MLEGKLAVL+FQIKIKEELE
Sbjct: 1140 PTLEQRCQYLSNAVLQAKNATNSDGLVSSTRSSSDTGLLDMLEGKLAVLRFQIKIKEELE 1199

Query: 545  AMASRVEGSSDMFDSNPNDPQR------PPTVDTNLANAAQEKAKELSLDLKSLTILYND 706
             MAS    SS++  S  N  +        PTVD N ANA +EKAKELS DLKS+T LYN+
Sbjct: 1200 HMAS----SSEVLHSTSNSVENGLVSDASPTVDANFANATREKAKELSSDLKSITQLYNE 1255

Query: 707  YALPFELWEVCLEILYFASYSGDADSSIVRETWARLIDQALSSGGIAEACTVLKRVGSHV 886
            YA+PF+LWE CLE+LYFA+YSGD+DSSIVRETWARLIDQA+S GGIAEAC+VLKR+G  +
Sbjct: 1256 YAVPFKLWETCLEMLYFANYSGDSDSSIVRETWARLIDQAISGGGIAEACSVLKRLGPRL 1315

Query: 887  YPGDGAGLPLDTLCLQLEKAALERLASGVELVGDEDVARALLAVCKGAAEPVLSTYDQFL 1066
            YPGDG    LD +CL LEKAALERL +GVE VGDEDVARAL++ CKGAAEPVL+ YDQ L
Sbjct: 1316 YPGDGTVFQLDIICLHLEKAALERLNTGVESVGDEDVARALVSACKGAAEPVLNAYDQLL 1375

Query: 1067 SSGTXXXXXXXXXXXXXXXXXXXXEWAMSVLSQRMGTNATGASLILNGSFS 1219
            S+G                     EWAMS+ S RMGT ATG+S+I+ G FS
Sbjct: 1376 SNGAILPSPNLRLRMLRSVLVVLREWAMSIYSHRMGTGATGSSIIIGGGFS 1426


>ref|XP_003530891.1| PREDICTED: nuclear pore complex protein Nup155-like [Glycine max]
          Length = 1486

 Score =  470 bits (1209), Expect = e-130
 Identities = 254/408 (62%), Positives = 297/408 (72%), Gaps = 3/408 (0%)
 Frame = +2

Query: 5    SRDKYIRQIVQLGVQSPDRLFHEHLYRTMIDXXXXXXXXXXXXPDLVPFLQNAGRQPIQE 184
            SR KYI QIVQLGVQSPDR+FHE+LY+ MID            PDL+PFLQ+AGR  I E
Sbjct: 1023 SRKKYICQIVQLGVQSPDRIFHEYLYQAMIDLGLENELLEYGGPDLLPFLQSAGRNSIHE 1082

Query: 185  VRAVSAVTSAPSLAGHSITTSESKYFELLARYYVLKRQHXXXXXXXXXXXXXXSTDSGDV 364
            VRAV+A TS    +G  +++++ KY+ELLARYYVLKRQH              STD   V
Sbjct: 1083 VRAVTATTSPVGQSGAPMSSNQVKYYELLARYYVLKRQHMLAAHALLRLAERRSTDG--V 1140

Query: 365  PTLEQRRQYLSNAVLQAKNASSGDGLLGSARGAFDSGLLEMLEGKLAVLQFQIKIKEELE 544
            PTLEQR QYLSNAVLQAKNA++ DGL+GS R + DSG L++LEGKLAVL FQIKIKEELE
Sbjct: 1141 PTLEQRCQYLSNAVLQAKNATNSDGLVGSGRISIDSGFLDLLEGKLAVLWFQIKIKEELE 1200

Query: 545  AMASRVEGSSDMFDSNPND--PQRPPTVDTNLANAAQEKAKELSLDLKSLTILYNDYALP 718
            +MASR +      +S  N   P+   T D N ANA +EKAKEL+ D+KS+T LYN+YA+P
Sbjct: 1201 SMASRSDVLPGTSESAENGVVPEGSSTADANFANATREKAKELASDVKSITQLYNEYAVP 1260

Query: 719  FELWEVCLEILYFASYSGDADSSIVRETWARLIDQALSSGGIAEACTVLKRVGSHVYPGD 898
            F LWE+CLE+LYFA+YSGD DSSIVRETWARL+DQA+S GGIAEAC+VLKRVG  +YPGD
Sbjct: 1261 FGLWEICLEMLYFANYSGDTDSSIVRETWARLMDQAISRGGIAEACSVLKRVGPRIYPGD 1320

Query: 899  GAGLPLDTLCLQLEKAALERLASGVELVGDEDVARALLAVCKGAAEPVLSTYDQFLSSGT 1078
            GA LPLD +CL LEKA LERL SGVE VGDEDVARAL++ CKGAAEPVL+ YDQ LS+G 
Sbjct: 1321 GAVLPLDIICLHLEKAGLERLNSGVEAVGDEDVARALVSACKGAAEPVLNAYDQLLSNGA 1380

Query: 1079 XXXXXXXXXXXXXXXXXXXXEWAMSVLSQRMG-TNATGASLILNGSFS 1219
                                EWAMSV SQRMG ++ATG SLIL G FS
Sbjct: 1381 ILPSPSVRLRMLRSVLVVLREWAMSVYSQRMGSSSATGHSLILGGGFS 1428