BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004406
         (1478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28851.3| unnamed protein product [Vitis vinifera]              353   6e-95
ref|XP_002518419.1| NSFL1 cofactor p47, putative [Ricinus commun...   348   2e-93
ref|XP_002272066.1| PREDICTED: UBA and UBX domain-containing pro...   333   9e-89
ref|XP_003546168.1| PREDICTED: UBA and UBX domain-containing pro...   328   2e-87
gb|ACU19568.1| unknown [Glycine max]                                  328   2e-87

>emb|CBI28851.3| unnamed protein product [Vitis vinifera]
          Length = 366

 Score =  353 bits (906), Expect = 6e-95
 Identities = 204/372 (54%), Positives = 229/372 (61%)
 Frame = +2

Query: 71   LETFCALTSSTPEEAIFFLESHNWDLDSAVSXXXXXXXXXXXXXXXGSTVPIMSSSSSRG 250
            ++ F  ++SS+   A+FFLESHNWDLD+A+S               GS +   SS+S R 
Sbjct: 16   IDAFLEISSSSRSVAVFFLESHNWDLDAALSAFLDNDSAHLAISVGGSAMA--SSASGR- 72

Query: 251  GDXXXXXXXXXVGGIHTLSDLKXXXXXXXXXXXXXXXPQEYYTGGQKSGMLVQDPSKNKG 430
                        GGI TLSDL                 QEYYTGG+KSGMLVQDPS    
Sbjct: 73   -----KVPPRGRGGIRTLSDLNRTAGDGSDSDSDG---QEYYTGGEKSGMLVQDPSS--A 122

Query: 431  NDVDSIFSQARQLGAMEGPAAHVHPXXXXXXFTGTGRLLSGXXXXXXXXXXXXXXXXXHN 610
            NDVD+IF+QA Q GA++ P  H+ P      FTG GRLLSG                 HN
Sbjct: 123  NDVDAIFNQAGQAGAVQRPIDHLPPSSSSRSFTGMGRLLSGETVSSTPQPPASIT---HN 179

Query: 611  IFFWRNGFTVDDGPLRTLADPENAPFLESITKSECPEELAPADRRTQVTVNLIKKDENFT 790
            I FW NGFTVDDGPLR L DPENA FLESI KSE PEE  PADRRT V VNL++K+E F 
Sbjct: 180  IIFWSNGFTVDDGPLRRLDDPENASFLESIKKSEWPEEFEPADRRTAVNVNLVRKNEKFI 239

Query: 791  EPEKRHVPFQGVGRTLGXXXXXXXXXXXXXXXXXXXXXXXLNTAPSRSIGLVVDQALPST 970
            EPEK H PFQGVGRTLG                        NTAP+ S+GLVVD+ LP T
Sbjct: 240  EPEKPHPPFQGVGRTLGCSSSNPVGPDPTVPATP------FNTAPAPSMGLVVDETLPLT 293

Query: 971  SIQLRLADGTRMVARFNYHHTVNDIRAFIDASRPGSPRTYHLQTVGFPPKQLTDASQTIE 1150
            SIQLRLADGTRM++RFNYHHTV DIR FIDASR   PR Y LQTVGFPPKQLTD  QTIE
Sbjct: 294  SIQLRLADGTRMISRFNYHHTVRDIRNFIDASRSSGPRDYQLQTVGFPPKQLTDLDQTIE 353

Query: 1151 QAGLLNSVVIQK 1186
            QAGL +SVVIQK
Sbjct: 354  QAGLASSVVIQK 365


>ref|XP_002518419.1| NSFL1 cofactor p47, putative [Ricinus communis]
            gi|223542264|gb|EEF43806.1| NSFL1 cofactor p47, putative
            [Ricinus communis]
          Length = 305

 Score =  348 bits (893), Expect = 2e-93
 Identities = 189/301 (62%), Positives = 210/301 (69%), Gaps = 1/301 (0%)
 Frame = +2

Query: 287  GGIHTLSDLKXXXXXXXXXXXXXXXPQEYYTGGQKSGMLVQDPSKNKGNDVDSIFSQARQ 466
            GGI TLSDL                PQEYYTGG+KSGMLVQDPSK  GNDVD+IF+QARQ
Sbjct: 17   GGIRTLSDLNRHTGPDSDSDDDA--PQEYYTGGEKSGMLVQDPSKGNGNDVDAIFNQARQ 74

Query: 467  LGAMEGPAAHVHPXXXXXXFTGTGRLLSGXXXXXXXXXXXXXXXXXHNIFFWRNGFTVDD 646
            LGA+EGP   + P      FTGTGRLLSG                 HNI FW NGFTV+D
Sbjct: 75   LGAVEGPLDPLRPSSSSRSFTGTGRLLSGETIPSAPQQPEAVI---HNIVFWTNGFTVND 131

Query: 647  GPLRTLADPENAPFLESITKSECPEELAPADRRTQVTVNLIKKDENFTEPEK-RHVPFQG 823
            GPLR L DPENAPFLESI KSECP+ELAPADRR+ V VNLI+++E   EPEK RHVPFQG
Sbjct: 132  GPLRRLDDPENAPFLESIRKSECPKELAPADRRSSVHVNLIRREEQCPEPEKQRHVPFQG 191

Query: 824  VGRTLGXXXXXXXXXXXXXXXXXXXXXXXLNTAPSRSIGLVVDQALPSTSIQLRLADGTR 1003
            VGRTLG                       +NTAP+ S+G+VVD++LPSTSIQLRLADGTR
Sbjct: 192  VGRTLGSSCTAASEPTANSTP--------VNTAPTSSMGVVVDESLPSTSIQLRLADGTR 243

Query: 1004 MVARFNYHHTVNDIRAFIDASRPGSPRTYHLQTVGFPPKQLTDASQTIEQAGLLNSVVIQ 1183
            M+A FNYHHTVNDIRAFIDASRPG  + Y LQ +GFPPK L D +QTIEQAGL NSVVIQ
Sbjct: 244  MIAHFNYHHTVNDIRAFIDASRPGGAQNYQLQLMGFPPKLLGDPTQTIEQAGLANSVVIQ 303

Query: 1184 K 1186
            K
Sbjct: 304  K 304


>ref|XP_002272066.1| PREDICTED: UBA and UBX domain-containing protein At4g15410 [Vitis
            vinifera] gi|147798327|emb|CAN74529.1| hypothetical
            protein VITISV_031346 [Vitis vinifera]
            gi|297741768|emb|CBI32997.3| unnamed protein product
            [Vitis vinifera]
          Length = 299

 Score =  333 bits (853), Expect = 9e-89
 Identities = 184/299 (61%), Positives = 204/299 (68%)
 Frame = +2

Query: 290  GIHTLSDLKXXXXXXXXXXXXXXXPQEYYTGGQKSGMLVQDPSKNKGNDVDSIFSQARQL 469
            GI TLSDL                PQEYYTGG+KSGMLVQDPSK  GNDVD+IF+QARQL
Sbjct: 16   GIRTLSDLNRPTAPDSDSDSDG--PQEYYTGGEKSGMLVQDPSK--GNDVDAIFNQARQL 71

Query: 470  GAMEGPAAHVHPXXXXXXFTGTGRLLSGXXXXXXXXXXXXXXXXXHNIFFWRNGFTVDDG 649
            GA+EGP   ++P      FTGTGRLLSG                 HNI FW NGFTV+DG
Sbjct: 72   GAVEGPM--INPSSSSRSFTGTGRLLSGELVPTAPQQPETVI---HNIVFWSNGFTVNDG 126

Query: 650  PLRTLADPENAPFLESITKSECPEELAPADRRTQVTVNLIKKDENFTEPEKRHVPFQGVG 829
            PLR L DPENA FLESI KSECP+EL PADRR+ V VNLI++DEN  E EK  VPFQGVG
Sbjct: 127  PLRRLDDPENASFLESIRKSECPKELEPADRRSSVHVNLIRRDENCPESEKTRVPFQGVG 186

Query: 830  RTLGXXXXXXXXXXXXXXXXXXXXXXXLNTAPSRSIGLVVDQALPSTSIQLRLADGTRMV 1009
            RTLG                       LNTAPS ++GL+VD+ALPSTSIQLRL+DGTRM+
Sbjct: 187  RTLGSSSAAPEPEPTVAPTP-------LNTAPSPNMGLIVDEALPSTSIQLRLSDGTRMI 239

Query: 1010 ARFNYHHTVNDIRAFIDASRPGSPRTYHLQTVGFPPKQLTDASQTIEQAGLLNSVVIQK 1186
            A FNYHHT+ DIRAFI+ASRPG    Y LQ +GFPPKQL D  QTIEQAGL NSVVIQK
Sbjct: 240  AHFNYHHTITDIRAFIEASRPGGSTNYQLQMMGFPPKQLNDPMQTIEQAGLANSVVIQK 298


>ref|XP_003546168.1| PREDICTED: UBA and UBX domain-containing protein At4g15410-like
            [Glycine max]
          Length = 301

 Score =  328 bits (842), Expect = 2e-87
 Identities = 180/300 (60%), Positives = 203/300 (67%)
 Frame = +2

Query: 287  GGIHTLSDLKXXXXXXXXXXXXXXXPQEYYTGGQKSGMLVQDPSKNKGNDVDSIFSQARQ 466
            G I TLSDL                PQEYYTGG+KSGMLVQDPSK  GNDVD IF+QARQ
Sbjct: 15   GRIRTLSDLNRPSADSDSDSDG---PQEYYTGGEKSGMLVQDPSK--GNDVDEIFNQARQ 69

Query: 467  LGAMEGPAAHVHPXXXXXXFTGTGRLLSGXXXXXXXXXXXXXXXXXHNIFFWRNGFTVDD 646
            LGA+E P   +        FTGTGRLLSG                 HNI FW NGFTV+D
Sbjct: 70   LGAVERPLDQLQEPPRSTSFTGTGRLLSGETTRSTNNQQPEAVV--HNIVFWSNGFTVND 127

Query: 647  GPLRTLADPENAPFLESITKSECPEELAPADRRTQVTVNLIKKDENFTEPEKRHVPFQGV 826
            GPLR+L DPENA FLESI KSECP+EL P DRR+ V VNLI+++EN+ EPEK+HV FQGV
Sbjct: 128  GPLRSLDDPENASFLESIKKSECPKELEPEDRRSSVNVNLIRRNENYREPEKQHVAFQGV 187

Query: 827  GRTLGXXXXXXXXXXXXXXXXXXXXXXXLNTAPSRSIGLVVDQALPSTSIQLRLADGTRM 1006
            GRTLG                        NTAP+ S GLVVDQ+LPSTSIQLRLADGTR+
Sbjct: 188  GRTLGSSSTSMAPDPPAASTPP-------NTAPTPSAGLVVDQSLPSTSIQLRLADGTRL 240

Query: 1007 VARFNYHHTVNDIRAFIDASRPGSPRTYHLQTVGFPPKQLTDASQTIEQAGLLNSVVIQK 1186
            ++ FNYHHT++DIRAFIDASRPG  + Y LQ +GFPPK L D +QTIEQAGL NSVVIQK
Sbjct: 241  ISHFNYHHTISDIRAFIDASRPGGRQNYQLQLMGFPPKILADETQTIEQAGLANSVVIQK 300


>gb|ACU19568.1| unknown [Glycine max]
          Length = 301

 Score =  328 bits (842), Expect = 2e-87
 Identities = 180/300 (60%), Positives = 203/300 (67%)
 Frame = +2

Query: 287  GGIHTLSDLKXXXXXXXXXXXXXXXPQEYYTGGQKSGMLVQDPSKNKGNDVDSIFSQARQ 466
            G I TLSDL                PQEYYTGG+KSGMLVQDPSK  GNDVD IF+QARQ
Sbjct: 15   GRIRTLSDLNRPSADSDSDSDG---PQEYYTGGEKSGMLVQDPSK--GNDVDEIFNQARQ 69

Query: 467  LGAMEGPAAHVHPXXXXXXFTGTGRLLSGXXXXXXXXXXXXXXXXXHNIFFWRNGFTVDD 646
            LGA+E P   +        FTGTGRLLSG                 HNI FW NGFTV+D
Sbjct: 70   LGAVERPLDQLREPPRSTSFTGTGRLLSGETTRSTNNQQPEAVV--HNIVFWSNGFTVND 127

Query: 647  GPLRTLADPENAPFLESITKSECPEELAPADRRTQVTVNLIKKDENFTEPEKRHVPFQGV 826
            GPLR+L DPENA FLESI KSECP+EL P DRR+ V VNLI+++EN+ EPEK+HV FQGV
Sbjct: 128  GPLRSLDDPENASFLESIKKSECPKELEPEDRRSSVNVNLIRRNENYREPEKQHVAFQGV 187

Query: 827  GRTLGXXXXXXXXXXXXXXXXXXXXXXXLNTAPSRSIGLVVDQALPSTSIQLRLADGTRM 1006
            GRTLG                        NTAP+ S GLVVDQ+LPSTSIQLRLADGTR+
Sbjct: 188  GRTLGSSSTSMAPDPPAASTPP-------NTAPTPSAGLVVDQSLPSTSIQLRLADGTRL 240

Query: 1007 VARFNYHHTVNDIRAFIDASRPGSPRTYHLQTVGFPPKQLTDASQTIEQAGLLNSVVIQK 1186
            ++ FNYHHT++DIRAFIDASRPG  + Y LQ +GFPPK L D +QTIEQAGL NSVVIQK
Sbjct: 241  ISHFNYHHTISDIRAFIDASRPGGRQNYQLQLMGFPPKILADETQTIEQAGLANSVVIQK 300