BLASTX nr result
ID: Coptis25_contig00004404
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00004404
(1999 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002310051.1| predicted protein [Populus trichocarpa] gi|2... 548 e-153
emb|CBI21547.3| unnamed protein product [Vitis vinifera] 548 e-153
ref|XP_002278249.1| PREDICTED: 26S proteasome non-ATPase regulat... 548 e-153
gb|ACF06585.1| 26S proteasome subunit RPN5b [Elaeis guineensis] 548 e-153
gb|ABK95699.1| unknown [Populus trichocarpa] 546 e-153
>ref|XP_002310051.1| predicted protein [Populus trichocarpa] gi|222852954|gb|EEE90501.1|
predicted protein [Populus trichocarpa]
Length = 442
Score = 548 bits (1413), Expect = e-153
Identities = 268/304 (88%), Positives = 290/304 (95%)
Frame = -2
Query: 1242 ETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDADTSKEKKKPKEGDNV 1063
ETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDADTSKEKKKPKEGDNV
Sbjct: 139 ETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDADTSKEKKKPKEGDNV 198
Query: 1062 VEEAPADIPSLLELKRIYYELMIRYYSHNNDYLEICRCYKAIYDISSVKEDPTKWVPVLR 883
VEEAPADIPSLLELKRIYYELMIRYYSH+NDYLEICRCYKAIY+I VKE+P +W+PVLR
Sbjct: 199 VEEAPADIPSLLELKRIYYELMIRYYSHDNDYLEICRCYKAIYEIPPVKENPAQWIPVLR 258
Query: 882 KICWYLVLAPHDPMQSSLLNSTLEDKNLSEIPNFGELLKQLVTMEVIQWTALWETCQNEF 703
KICWYLVLAPHDPMQSSLLNSTLEDKNLSEI NF LLKQLVTMEVIQWT+LW +EF
Sbjct: 259 KICWYLVLAPHDPMQSSLLNSTLEDKNLSEISNFKLLLKQLVTMEVIQWTSLWNAFMDEF 318
Query: 702 ENEKNMLGGSLGDKAAEDLRQRIIEHNILVVSKYYARLTLQRLAKLLCLTIEETEKHLSD 523
ENEKN+LGGSLGDKAAEDL+QRIIEHNILVVSKYY+R+T++RLA+LLCL+I+E EKHLSD
Sbjct: 319 ENEKNLLGGSLGDKAAEDLKQRIIEHNILVVSKYYSRITVKRLAELLCLSIQEAEKHLSD 378
Query: 522 MVVSKSLVAKVDRPMGTVCFQTAKDSNEVLNSWAMNLERLLDLVEKSCHQIHKETMIHKA 343
MVVSK+LVAK+DRPMG V FQ AKDSN++LNSWAMNLE+LLDLVEKSCHQIHKETM+HKA
Sbjct: 379 MVVSKALVAKIDRPMGIVSFQVAKDSNDILNSWAMNLEKLLDLVEKSCHQIHKETMVHKA 438
Query: 342 ALKV 331
ALKV
Sbjct: 439 ALKV 442
Score = 143 bits (360), Expect = 2e-31
Identities = 74/116 (63%), Positives = 91/116 (78%)
Frame = -1
Query: 1738 MEGGDNLDAQIESLLNVEKQSRLAENVSATKKAVIDIIQLCYGARAWKTLNEQILILSKR 1559
MEG NL+A IE L NVEKQ RLA +V+ TKKAV +I+QLC+ A+ WK LN+QI++LSK+
Sbjct: 1 MEGKANLEAAIEQLQNVEKQMRLAGDVAGTKKAVTEILQLCFEAKDWKALNDQIILLSKK 60
Query: 1558 RGQLKXXXXXXXXXXXQYIDDTPDIEARVELIKTLNSVSAGKIYVELERARLIKKL 1391
RGQLK QYID+T D++ R+ELIKTLNSVSAGKIYVE+ERARLI+KL
Sbjct: 61 RGQLKQAVTAMVQQAMQYIDETLDLDTRIELIKTLNSVSAGKIYVEIERARLIRKL 116
>emb|CBI21547.3| unnamed protein product [Vitis vinifera]
Length = 460
Score = 548 bits (1412), Expect = e-153
Identities = 267/304 (87%), Positives = 292/304 (96%)
Frame = -2
Query: 1242 ETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDADTSKEKKKPKEGDNV 1063
ETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDAD+SKEKKKPKEGD+V
Sbjct: 157 ETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDADSSKEKKKPKEGDSV 216
Query: 1062 VEEAPADIPSLLELKRIYYELMIRYYSHNNDYLEICRCYKAIYDISSVKEDPTKWVPVLR 883
VEEAPADIPSL ELKRIYYELMIRY+SH+NDYLEICR YKAIY+I SV+EDP +W+PVLR
Sbjct: 217 VEEAPADIPSLPELKRIYYELMIRYHSHSNDYLEICRSYKAIYEIPSVREDPAQWIPVLR 276
Query: 882 KICWYLVLAPHDPMQSSLLNSTLEDKNLSEIPNFGELLKQLVTMEVIQWTALWETCQNEF 703
KICWYLVL+PHDPMQSSLLNSTLEDKNLSEIPNF LLKQLVTMEVIQW +LW ++EF
Sbjct: 277 KICWYLVLSPHDPMQSSLLNSTLEDKNLSEIPNFRLLLKQLVTMEVIQWISLWNMFKDEF 336
Query: 702 ENEKNMLGGSLGDKAAEDLRQRIIEHNILVVSKYYARLTLQRLAKLLCLTIEETEKHLSD 523
ENEKNMLGGSLGDKAAEDLRQRIIEHNILVVSKYY+R+TL+RLA+LLCL+++E EKHLSD
Sbjct: 337 ENEKNMLGGSLGDKAAEDLRQRIIEHNILVVSKYYSRITLKRLAELLCLSVQEAEKHLSD 396
Query: 522 MVVSKSLVAKVDRPMGTVCFQTAKDSNEVLNSWAMNLERLLDLVEKSCHQIHKETMIHKA 343
MVVSKSLVAK+DRPMG VCFQTAKDSN++LNSW+MNLE+LLDLVEKSCHQIHKETM+HKA
Sbjct: 397 MVVSKSLVAKIDRPMGVVCFQTAKDSNDILNSWSMNLEKLLDLVEKSCHQIHKETMVHKA 456
Query: 342 ALKV 331
ALKV
Sbjct: 457 ALKV 460
Score = 123 bits (308), Expect = 2e-25
Identities = 68/110 (61%), Positives = 80/110 (72%)
Frame = -1
Query: 1720 LDAQIESLLNVEKQSRLAENVSATKKAVIDIIQLCYGARAWKTLNEQILILSKRRGQLKX 1541
L QI S+ N+ L+ N AV DI+QLC+ ARAWKTLN+QI++LSKRRGQLK
Sbjct: 30 LQQQISSISNI-----LSLNRKWRLNAVTDILQLCFEARAWKTLNDQIVLLSKRRGQLKQ 84
Query: 1540 XXXXXXXXXXQYIDDTPDIEARVELIKTLNSVSAGKIYVELERARLIKKL 1391
QYID TPDIE+++ELIKTLNSVSAGKIYVE+ERARLIKKL
Sbjct: 85 AVTAMVQQAMQYIDQTPDIESKIELIKTLNSVSAGKIYVEIERARLIKKL 134
>ref|XP_002278249.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 12-like
[Vitis vinifera]
Length = 442
Score = 548 bits (1412), Expect = e-153
Identities = 267/304 (87%), Positives = 292/304 (96%)
Frame = -2
Query: 1242 ETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDADTSKEKKKPKEGDNV 1063
ETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDAD+SKEKKKPKEGD+V
Sbjct: 139 ETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDADSSKEKKKPKEGDSV 198
Query: 1062 VEEAPADIPSLLELKRIYYELMIRYYSHNNDYLEICRCYKAIYDISSVKEDPTKWVPVLR 883
VEEAPADIPSL ELKRIYYELMIRY+SH+NDYLEICR YKAIY+I SV+EDP +W+PVLR
Sbjct: 199 VEEAPADIPSLPELKRIYYELMIRYHSHSNDYLEICRSYKAIYEIPSVREDPAQWIPVLR 258
Query: 882 KICWYLVLAPHDPMQSSLLNSTLEDKNLSEIPNFGELLKQLVTMEVIQWTALWETCQNEF 703
KICWYLVL+PHDPMQSSLLNSTLEDKNLSEIPNF LLKQLVTMEVIQW +LW ++EF
Sbjct: 259 KICWYLVLSPHDPMQSSLLNSTLEDKNLSEIPNFRLLLKQLVTMEVIQWISLWNMFKDEF 318
Query: 702 ENEKNMLGGSLGDKAAEDLRQRIIEHNILVVSKYYARLTLQRLAKLLCLTIEETEKHLSD 523
ENEKNMLGGSLGDKAAEDLRQRIIEHNILVVSKYY+R+TL+RLA+LLCL+++E EKHLSD
Sbjct: 319 ENEKNMLGGSLGDKAAEDLRQRIIEHNILVVSKYYSRITLKRLAELLCLSVQEAEKHLSD 378
Query: 522 MVVSKSLVAKVDRPMGTVCFQTAKDSNEVLNSWAMNLERLLDLVEKSCHQIHKETMIHKA 343
MVVSKSLVAK+DRPMG VCFQTAKDSN++LNSW+MNLE+LLDLVEKSCHQIHKETM+HKA
Sbjct: 379 MVVSKSLVAKIDRPMGVVCFQTAKDSNDILNSWSMNLEKLLDLVEKSCHQIHKETMVHKA 438
Query: 342 ALKV 331
ALKV
Sbjct: 439 ALKV 442
Score = 160 bits (404), Expect = 2e-36
Identities = 84/116 (72%), Positives = 96/116 (82%)
Frame = -1
Query: 1738 MEGGDNLDAQIESLLNVEKQSRLAENVSATKKAVIDIIQLCYGARAWKTLNEQILILSKR 1559
ME NLDA+IE+LLNVEKQ RLA +VS TKKAV DI+QLC+ ARAWKTLN+QI++LSKR
Sbjct: 1 MEAQRNLDAEIEALLNVEKQIRLAGDVSGTKKAVTDILQLCFEARAWKTLNDQIVLLSKR 60
Query: 1558 RGQLKXXXXXXXXXXXQYIDDTPDIEARVELIKTLNSVSAGKIYVELERARLIKKL 1391
RGQLK QYID TPDIE+++ELIKTLNSVSAGKIYVE+ERARLIKKL
Sbjct: 61 RGQLKQAVTAMVQQAMQYIDQTPDIESKIELIKTLNSVSAGKIYVEIERARLIKKL 116
>gb|ACF06585.1| 26S proteasome subunit RPN5b [Elaeis guineensis]
Length = 440
Score = 548 bits (1412), Expect = e-153
Identities = 269/303 (88%), Positives = 288/303 (95%)
Frame = -2
Query: 1242 ETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDADTSKEKKKPKEGDNV 1063
ETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDAD SKEKKKPKEGDNV
Sbjct: 137 ETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDADPSKEKKKPKEGDNV 196
Query: 1062 VEEAPADIPSLLELKRIYYELMIRYYSHNNDYLEICRCYKAIYDISSVKEDPTKWVPVLR 883
VEEAPADIPSLLELKRIYYELMIRY+SHNNDYLEICR YKAIYDI SVKEDP +W+PVLR
Sbjct: 197 VEEAPADIPSLLELKRIYYELMIRYHSHNNDYLEICRSYKAIYDIPSVKEDPAQWIPVLR 256
Query: 882 KICWYLVLAPHDPMQSSLLNSTLEDKNLSEIPNFGELLKQLVTMEVIQWTALWETCQNEF 703
KICWYLVL+PHDPMQSSLLNSTLEDKNLSEIPNF LLKQLVTMEVIQWT LWE ++EF
Sbjct: 257 KICWYLVLSPHDPMQSSLLNSTLEDKNLSEIPNFRLLLKQLVTMEVIQWTGLWEMYKDEF 316
Query: 702 ENEKNMLGGSLGDKAAEDLRQRIIEHNILVVSKYYARLTLQRLAKLLCLTIEETEKHLSD 523
ENEK+MLGGSLG KAAEDL+ RIIEHNILVVSKYY+R+TL+RLA LLCL+++E EKHLSD
Sbjct: 317 ENEKSMLGGSLGAKAAEDLKLRIIEHNILVVSKYYSRITLKRLADLLCLSLQEAEKHLSD 376
Query: 522 MVVSKSLVAKVDRPMGTVCFQTAKDSNEVLNSWAMNLERLLDLVEKSCHQIHKETMIHKA 343
MVVSKSLVAK+DRPMG VCFQTAKDSN++LNSWAMNLE+LLDLVEKSCHQIHKETM+HKA
Sbjct: 377 MVVSKSLVAKIDRPMGIVCFQTAKDSNDILNSWAMNLEKLLDLVEKSCHQIHKETMVHKA 436
Query: 342 ALK 334
LK
Sbjct: 437 VLK 439
Score = 155 bits (393), Expect = 3e-35
Identities = 80/112 (71%), Positives = 93/112 (83%)
Frame = -1
Query: 1726 DNLDAQIESLLNVEKQSRLAENVSATKKAVIDIIQLCYGARAWKTLNEQILILSKRRGQL 1547
+NLDA IESLLNVEKQ RLA +V+ TKKAV DI++LCY A AWKTLN+QI++LSKRRGQL
Sbjct: 3 ENLDAAIESLLNVEKQMRLAGDVAGTKKAVTDIVELCYKAGAWKTLNDQIVLLSKRRGQL 62
Query: 1546 KXXXXXXXXXXXQYIDDTPDIEARVELIKTLNSVSAGKIYVELERARLIKKL 1391
K QYID+TPD++ R+ELIKTLNSVSAGKIYVE+ERARLIKKL
Sbjct: 63 KQAVTSMVQQAMQYIDETPDVDTRIELIKTLNSVSAGKIYVEIERARLIKKL 114
>gb|ABK95699.1| unknown [Populus trichocarpa]
Length = 442
Score = 546 bits (1408), Expect = e-153
Identities = 267/304 (87%), Positives = 289/304 (95%)
Frame = -2
Query: 1242 ETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDADTSKEKKKPKEGDNV 1063
ETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDAD SKEKKKPKEGDNV
Sbjct: 139 ETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDADASKEKKKPKEGDNV 198
Query: 1062 VEEAPADIPSLLELKRIYYELMIRYYSHNNDYLEICRCYKAIYDISSVKEDPTKWVPVLR 883
VEEAPADIPSLLELKRIYYELMIRYYSH+NDYLEICRCYKAIY+I VKE+P +W+PVLR
Sbjct: 199 VEEAPADIPSLLELKRIYYELMIRYYSHDNDYLEICRCYKAIYEIPPVKENPAQWIPVLR 258
Query: 882 KICWYLVLAPHDPMQSSLLNSTLEDKNLSEIPNFGELLKQLVTMEVIQWTALWETCQNEF 703
KICWYLVLAPHDPMQSSLLNSTLEDKNLSEI NF LLKQLVTMEVIQWT+LW +EF
Sbjct: 259 KICWYLVLAPHDPMQSSLLNSTLEDKNLSEISNFKLLLKQLVTMEVIQWTSLWNAFMDEF 318
Query: 702 ENEKNMLGGSLGDKAAEDLRQRIIEHNILVVSKYYARLTLQRLAKLLCLTIEETEKHLSD 523
ENEKN+LGGSLGDKAAEDL+QRIIEHNILVVSKYY+R+T++RLA+LLCL+I+E EKHLSD
Sbjct: 319 ENEKNLLGGSLGDKAAEDLKQRIIEHNILVVSKYYSRITVKRLAELLCLSIQEAEKHLSD 378
Query: 522 MVVSKSLVAKVDRPMGTVCFQTAKDSNEVLNSWAMNLERLLDLVEKSCHQIHKETMIHKA 343
MVVSK+LVAK+DRPMG V FQ AKDSN++LNSWAMNLE+LLDLVEKSCHQIHKETM+HKA
Sbjct: 379 MVVSKALVAKIDRPMGIVSFQVAKDSNDILNSWAMNLEKLLDLVEKSCHQIHKETMVHKA 438
Query: 342 ALKV 331
ALKV
Sbjct: 439 ALKV 442
Score = 143 bits (360), Expect = 2e-31
Identities = 74/116 (63%), Positives = 91/116 (78%)
Frame = -1
Query: 1738 MEGGDNLDAQIESLLNVEKQSRLAENVSATKKAVIDIIQLCYGARAWKTLNEQILILSKR 1559
MEG NL+A IE L NVEKQ RLA +V+ TKKAV +I+QLC+ A+ WK LN+QI++LSK+
Sbjct: 1 MEGKANLEAAIEQLQNVEKQMRLAGDVAGTKKAVTEILQLCFEAKDWKALNDQIILLSKK 60
Query: 1558 RGQLKXXXXXXXXXXXQYIDDTPDIEARVELIKTLNSVSAGKIYVELERARLIKKL 1391
RGQLK QYID+T D++ R+ELIKTLNSVSAGKIYVE+ERARLI+KL
Sbjct: 61 RGQLKQAVTAMVQQAMQYIDETLDLDTRIELIKTLNSVSAGKIYVEIERARLIRKL 116