BLASTX nr result
ID: Coptis25_contig00004375
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00004375
(1673 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncat... 135 2e-29
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g... 134 6e-29
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin... 129 2e-27
ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|2... 129 2e-27
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2... 129 3e-27
>ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncatula]
gi|355483131|gb|AES64334.1| F-box/kelch-repeat protein
[Medicago truncatula]
Length = 366
Score = 135 bits (341), Expect = 2e-29
Identities = 121/394 (30%), Positives = 184/394 (46%), Gaps = 32/394 (8%)
Frame = -2
Query: 1423 PEEIIIEILARLPVKSXXXXXXXXXXXXXLITSPYFVQLQLDRANEN-----NSRIIL-A 1262
PEE+I+EIL +LP+KS +I++PYF++ QL + +N N RIIL A
Sbjct: 9 PEELILEILIKLPIKSLLRFRCVCKSWLHIISNPYFIKKQLHFSTQNTHFTTNHRIILSA 68
Query: 1261 TVSNKHYSLSSLDYYNQTSSSMANRYKLSLPCELL---IVGSCNGLVCLSDYKTIVVICN 1091
T + H S+ S++++ + + IVGSCNGL+C + V++ N
Sbjct: 69 TTAEFHLKSCSITSLFNNPSTVSDDLNYPVKNKFRHDGIVGSCNGLLCFAIKGDCVLLWN 128
Query: 1090 PVTSDYISVPFDLIKKRPAYCNQW-------FGIGFGHDPHSDKYKVVRV----DMYFSS 944
P + KK P N W FG+G+ H +D YKVV V + +FS
Sbjct: 129 P--------SIRVSKKSPPLGNNWRPGCFTCFGLGYDH--VNDDYKVVAVFCDPNEFFSE 178
Query: 943 ANTGDPGDCDLHVYTLGTKQWRRI-EIPCHLA--QSFSIPYLNGALHW---LRLTDQSRW 782
+ + VY++ T WR+I + P ++ Q+ S +++G L+W + S W
Sbjct: 179 SK--------VKVYSMATNTWRKIHDFPHGVSPYQNSSGKFVSGTLNWASNYSIGSSSFW 230
Query: 781 DHNPQITDDKSIMAFDIKSEKFEEV--PKFSSHRQTNERLGVLQGCLSCTKYYGEYAD-- 614
+I++ D++ E + EV P + + L VL+GCL C Y + D
Sbjct: 231 ----------TIVSLDLEKETYREVLPPDYEKEECSTPSLSVLKGCL-CMNYDYKKTDFV 279
Query: 613 IWLMKQYGVKESWTKLLSICF-PLRRSCKMK-PLVVGRKGEILLEPMRTSGYVLGRPPRS 440
+WLMK YGV+ESW KLL+I + P P + GE+LL M +L PR
Sbjct: 280 VWLMKDYGVRESWIKLLTIPYLPNPEDFSYSGPYCISENGEVLL--MFEFDLIL-YDPRD 336
Query: 439 HLYEYEPLSNSLNEYDTGNIRWIDVHAYVESLVT 338
H + Y + G W D YVESLV+
Sbjct: 337 HSFRYPRIE--------GGKGWFDAEVYVESLVS 362
>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
gi|222854763|gb|EEE92310.1| f-box family protein [Populus
trichocarpa]
Length = 396
Score = 134 bits (338), Expect = 6e-29
Identities = 110/342 (32%), Positives = 165/342 (48%), Gaps = 26/342 (7%)
Frame = -2
Query: 1432 ASFPEEIIIEILARLPVKSXXXXXXXXXXXXXLITSPYFVQLQLDRANENNSR--IILAT 1259
+ P E+I EIL RLP K LI P FV+L L + + +S IIL T
Sbjct: 2 SGLPLEMIAEILCRLPAKELLCCRSVSKPWCALIDGPNFVKLHLKHSMDTSSNLYIILRT 61
Query: 1258 VSNKHYSLSSLDY-YNQTSSSMANRYKLSLPCE-----LLIVGSCNGLVCLSDYKTIVVI 1097
S+ HY +D+ N + +L+ P + ++GS NGL+C+S+ + +
Sbjct: 62 TSHVHY----MDFEQNLVLNDCVTLKELNHPLMCYNHGIKVLGSVNGLLCISNVVDDIAV 117
Query: 1096 CNPVTSDYISVPFDLIKKRPAYCNQWFG--------IGFGHDPHSDKYKVVRVDMYFSSA 941
NP T + VPF P ++FG GFG+D D YK+VR+ +
Sbjct: 118 WNPSTRKHRVVPF-----LPIELKRYFGTKSCSVYVFGFGYDSVRDDYKLVRIAQFGGGG 172
Query: 940 NTGDPGDCDLHVYTLGTKQWRRI-EIP-CHLAQSFSIPYLNGALHWLRLTDQSRWDHNPQ 767
+ ++ VY+L + WRRI ++P C + + NGALHW+ NP+
Sbjct: 173 KRSF--ESEVKVYSLRKQSWRRIGDMPYCVHYPGANGVFANGALHWVV-------GENPE 223
Query: 766 ITDDKSIMAFDIKSEKFEEV--PKFSSHRQTNERLGVLQGCLS-CTKYYGEYADIWLMKQ 596
++A D+ E + EV P++ + LGVL+GCL + GE D+W+MK+
Sbjct: 224 SNVANIVVALDLGVEDYREVLQPEYKDKNFYID-LGVLRGCLCFLANFLGERVDVWMMKE 282
Query: 595 YGVKESWTKLLSIC----FPLRRSCKMKPLVVGRKG-EILLE 485
YGVKESWTKL S+ RS +KPL + G E+L+E
Sbjct: 283 YGVKESWTKLFSVAQYEVIGFLRS--LKPLAYSKSGDEVLIE 322
>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
gi|255637050|gb|ACU18857.1| unknown [Glycine max]
Length = 406
Score = 129 bits (324), Expect = 2e-27
Identities = 118/389 (30%), Positives = 182/389 (46%), Gaps = 27/389 (6%)
Frame = -2
Query: 1423 PEEIIIEILARLPVKSXXXXXXXXXXXXXLITSPYFVQLQLDRANE----NNSRIIL-AT 1259
P+E+++EIL+RLPVKS LI+ PYF++ L ++ + RIIL AT
Sbjct: 50 PDELVVEILSRLPVKSLLQFRCVCKSWMSLISDPYFMKKHLHLSSRCTHFTHHRIILSAT 109
Query: 1258 VSNKHY---SLSSLDYYNQTSSSMANRYKLSLPCELL---IVGSCNGLVCLSDYKTIVVI 1097
+ H SLSSL +N SS++ + + + IVGSCNGL+C + V++
Sbjct: 110 TAEFHLKSCSLSSL--FNNPSSTVCDDLNYPVKNKFRHDGIVGSCNGLLCFAIKGDCVLL 167
Query: 1096 CNPVTSDYISVPFDLIKKRPAYCNQW-----FGIGFGHDPHSDKYKVVRVDMYFSSANTG 932
NP + KK P N W G G+D ++ YKVV V
Sbjct: 168 WNP--------SIRVSKKSPPLGNNWRPGCFTAFGLGYDHVNEDYKVVAVFC-------- 211
Query: 931 DPGD----CDLHVYTLGTKQWRRIEIPCHLAQSF--SIPYLNGALHWLRLTDQSRWDHNP 770
DP + C + VY++ T WR+I+ H F S +++G L+W +H+
Sbjct: 212 DPSEYFIECKVKVYSMATNSWRKIQDFPHGFLPFQNSGKFVSGTLNWAA-------NHSI 264
Query: 769 QITDDKSIMAFDIKSEKFEEV--PKFSSHRQTNERLGVLQGCLSCTKYYGE-YADIWLMK 599
+ I++ D+ E + EV P + + LGVLQGCL Y + + +W+MK
Sbjct: 265 GPSSFWVIVSLDLHKETYREVLPPDYEKEDCSTPSLGVLQGCLCMNYDYKKTHFVVWMMK 324
Query: 598 QYGVKESWTKLLSICF-PLRRSCKMK-PLVVGRKGEILLEPMRTSGYVLGRPPRSHLYEY 425
YGV+ESW KL+SI + P P + G++LL M +L PR++ ++Y
Sbjct: 325 DYGVRESWVKLVSIPYVPNPEDFSYSGPYYISENGKVLL--MFEFDLIL-YDPRNNSFKY 381
Query: 424 EPLSNSLNEYDTGNIRWIDVHAYVESLVT 338
+ + W D YVE+LV+
Sbjct: 382 PKIESGKG--------WFDAEVYVETLVS 402
>ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|222860326|gb|EEE97873.1|
predicted protein [Populus trichocarpa]
Length = 410
Score = 129 bits (324), Expect = 2e-27
Identities = 109/341 (31%), Positives = 170/341 (49%), Gaps = 26/341 (7%)
Frame = -2
Query: 1432 ASFPEEIIIEILARLPVKSXXXXXXXXXXXXXLITSPYFVQLQLDRANENNSRIILAT-- 1259
++ P++I +IL +LP+KS L++ YF ++Q +RA S ++L +
Sbjct: 26 SALPDDITADILLQLPLKSKIQCRCVCRTWRNLLSDSYFSEVQRERAQ---SMLVLRSPP 82
Query: 1258 --VSNKHYSLSSLDYY--NQTSSSMANRY-----KLSLP-CELLIVGSCNGLVCLSDY-- 1115
VS K +L+ D+Y + S S+ N K +LP C + +VGSCNGL+CL D
Sbjct: 83 SCVSRKAAALAPNDFYVVDLESGSVRNNVMKLNTKNNLPTCHVELVGSCNGLLCLFDKNS 142
Query: 1114 KTIVVICNPVTSDYISVPFDLIKKRPAYCNQWFGI-GFGHDPHSDKYKVVRVD---MYFS 947
K + +CNPVT +++ P + K++ + GFG P S+ Y V+R+ + +
Sbjct: 143 KKVFYLCNPVTGEHVRTPANCKKEKQRGKTILDAVLGFGFSPKSNHYMVLRITRKKLTYP 202
Query: 946 SANTGDPGDCDLHVYTLGTKQWRRI-EIPCHLAQSFSIPYLNGALHWLRLTDQSRWDHNP 770
+ G+ + G +W+ I EIP + F LNGALHW+ D
Sbjct: 203 ISILRSEGE----ICIFGDNEWKSIGEIPFPDCKKFFGVSLNGALHWILNLDDYE----- 253
Query: 769 QITDDKSIMAFDIKSEKFEEV-PKFSSHRQTNER-LGVLQGCLS-CTKYYGEYADIWLMK 599
D I A DI S+K + P R T E LGVL+ CL C DIW+MK
Sbjct: 254 ---DADLICALDIDSKKIRPMSPPNGFRRDTTEMTLGVLRDCLFICDSMTLYNLDIWVMK 310
Query: 598 QYGVKESWTKLLSIC---FPLR-RSCKMKPLVVGRKGEILL 488
+YGVK+SWTK + I P ++ ++P++V + GE+L+
Sbjct: 311 EYGVKDSWTKEIVIAKTSLPSNLQNSFLQPIMVSKDGEVLI 351
>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
predicted protein [Populus trichocarpa]
Length = 408
Score = 129 bits (323), Expect = 3e-27
Identities = 106/342 (30%), Positives = 166/342 (48%), Gaps = 28/342 (8%)
Frame = -2
Query: 1426 FPEEIIIEILARLPVKSXXXXXXXXXXXXXLITSPYFVQLQLDRANENNSRIILATVSNK 1247
FPE I +IL+RLPVKS I SPYF+ L R+++ ++ + L
Sbjct: 4 FPE-ITADILSRLPVKSLKRFRCVSKSWCKEIDSPYFINTHLKRSSQAHTHLNLILRDAT 62
Query: 1246 HYSLSSLDYYNQTSSSMANRYKLSLPCELLIVGSCNGLVCLSDYKTIVVICNPVTSDY-- 1073
+ LD + TS + N S C ++GSCNGL+ L + + + NP T +
Sbjct: 63 NLCTVDLDSPDFTSIELKNNPLKSDDCATEVMGSCNGLLALLNSDFSIALYNPSTREKKM 122
Query: 1072 -----ISVPFDLIKKRPAYCNQWFGIGFGHDPHSDKYKVVRVDMYFSSANTGDPGDCDLH 908
+ +P DL + + ++ GFGHDP ++ YKVVR ++ + G C++
Sbjct: 123 IPVSPLELPNDLDDSKVSSLFNFY--GFGHDPINEDYKVVRFIHFYGDSPDGF-FHCEVK 179
Query: 907 VYTLGTKQWRRI-EIPCHLAQSFSIP-------------YLNGALHWLRLTDQSRWDHNP 770
VY+L + W+RI + P L F +P + N A+HW + T + N
Sbjct: 180 VYSLKSNSWKRIDDYPYDL--RFILPPDYHPRCRRGYGVFANSAVHW-KATVVGKGKEN- 235
Query: 769 QITDDKSIMAFDIKSEKFEEVPKFS-SHRQTNERLGVLQGCLS--CTKYYGEYADIWLMK 599
I+AFD+ +E+F+ +P+ S + +GVL GCL C K + +IW+MK
Sbjct: 236 ---GSDLIVAFDLGAEEFKIIPQPDYSSNEHEMNVGVLGGCLCVFCNKNC-KQVEIWVMK 291
Query: 598 QYGVKESWTKLLSICFPLRRSC---KMKPLVVGRKGE-ILLE 485
+YGVKESWT L ++ L+ +PL + G+ ILLE
Sbjct: 292 EYGVKESWTHLCTVIAQLQVKAFWLHARPLAYSKGGDKILLE 333