BLASTX nr result

ID: Coptis25_contig00004318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004318
         (1250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264805.2| PREDICTED: uncharacterized protein LOC100262...    69   3e-09
emb|CBI23519.3| unnamed protein product [Vitis vinifera]               69   3e-09
ref|XP_003611553.1| hypothetical protein MTR_5g015230 [Medicago ...    63   2e-07
ref|XP_002310333.1| predicted protein [Populus trichocarpa] gi|2...    58   6e-06
ref|XP_003539261.1| PREDICTED: uncharacterized protein LOC100818...    57   8e-06

>ref|XP_002264805.2| PREDICTED: uncharacterized protein LOC100262923 [Vitis vinifera]
          Length = 179

 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 46/97 (47%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
 Frame = +2

Query: 59  KKLTRAQRKRIRKKKLKEAASCRRKMIGPLLPSTDGIQIEEDNEVEPLNYLHENTNQQIS 238
           +KLTRAQRKR+R+KKLKE ASCRRK+IGP LPS  G  +E+    +P    H   ++ + 
Sbjct: 71  QKLTRAQRKRLRQKKLKETASCRRKIIGPQLPSPSGGDLED----KPPKIPHSAADELV- 125

Query: 239 CGAVQEPNAGNNHQGESFVPTAQN--RRKHRRMAKRL 343
            GA+ +P  GN        PT +N  + K RRMAK+L
Sbjct: 126 -GAMGKP--GN-------TPTRRNQTKLKLRRMAKKL 152


>emb|CBI23519.3| unnamed protein product [Vitis vinifera]
          Length = 177

 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 46/97 (47%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
 Frame = +2

Query: 59  KKLTRAQRKRIRKKKLKEAASCRRKMIGPLLPSTDGIQIEEDNEVEPLNYLHENTNQQIS 238
           +KLTRAQRKR+R+KKLKE ASCRRK+IGP LPS  G  +E+    +P    H   ++ + 
Sbjct: 69  QKLTRAQRKRLRQKKLKETASCRRKIIGPQLPSPSGGDLED----KPPKIPHSAADELV- 123

Query: 239 CGAVQEPNAGNNHQGESFVPTAQN--RRKHRRMAKRL 343
            GA+ +P  GN        PT +N  + K RRMAK+L
Sbjct: 124 -GAMGKP--GN-------TPTRRNQTKLKLRRMAKKL 150


>ref|XP_003611553.1| hypothetical protein MTR_5g015230 [Medicago truncatula]
           gi|355512888|gb|AES94511.1| hypothetical protein
           MTR_5g015230 [Medicago truncatula]
          Length = 235

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 43/115 (37%), Positives = 56/115 (48%), Gaps = 11/115 (9%)
 Frame = +2

Query: 59  KKLTRAQRKRIRKKKLKEAASCRRKMIGPLLPSTDGIQIEEDNEVEPLNYLHENTNQQIS 238
           +KLTRAQRKRIRKKK+KE A  R K+IGPLLP T   Q  +D    P   +  N +Q   
Sbjct: 129 EKLTRAQRKRIRKKKMKEEAILRGKLIGPLLPPTQATQCGDD---APPPTVRSNASQ--- 182

Query: 239 CGAVQEPNAGNNHQGESFVPTAQNRRKHRRMAKRLT-----------CNSSEVAA 370
                        +G+  V     + K RRMAKR+            CN S +++
Sbjct: 183 -------------EGDETVCVNSKKMKQRRMAKRVAKEKRVASPLDKCNQSSISS 224


>ref|XP_002310333.1| predicted protein [Populus trichocarpa] gi|222853236|gb|EEE90783.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 43/98 (43%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
 Frame = +2

Query: 62  KLTRAQRKRIRKKKLKEAASCRRKMIGPL-LPSTDGIQIEEDNEVEPLNYLHENTNQ--- 229
           KLTRAQRKR+R+KKLKE  S R K+IGPL L S DG         E    + EN ++   
Sbjct: 75  KLTRAQRKRLRRKKLKEDISRRGKIIGPLPLSSNDGEGGCSSAVKERSPAVRENADEDDS 134

Query: 230 QISCGAVQEPNAGNNHQGESFVPTAQNRRKHRRMAKRL 343
            +S  A   P  G N          Q++ K RRMAKRL
Sbjct: 135 HLSAAASNNPGGGAN----------QSKLKQRRMAKRL 162


>ref|XP_003539261.1| PREDICTED: uncharacterized protein LOC100818582 [Glycine max]
          Length = 159

 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 41/95 (43%), Positives = 47/95 (49%)
 Frame = +2

Query: 59  KKLTRAQRKRIRKKKLKEAASCRRKMIGPLLPSTDGIQIEEDNEVEPLNYLHENTNQQIS 238
           +KLTRAQRK+IRKKKLKE A  R K+IGPLLP T   Q+ ED      N   E      +
Sbjct: 75  EKLTRAQRKKIRKKKLKEEAIHRGKLIGPLLPLTP-TQVPEDAPTVRSNAPEEGDEDVGA 133

Query: 239 CGAVQEPNAGNNHQGESFVPTAQNRRKHRRMAKRL 343
           C                       + KHRRMAKRL
Sbjct: 134 C-------------------AKSVKVKHRRMAKRL 149


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