BLASTX nr result

ID: Coptis25_contig00004262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004262
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265108.2| PREDICTED: uncharacterized protein LOC100252...   117   1e-24
ref|XP_003517161.1| PREDICTED: uncharacterized protein LOC100810...   115   5e-24
ref|XP_003612947.1| Glycine-rich protein [Medicago truncatula] g...   114   8e-24
ref|XP_003534259.1| PREDICTED: uncharacterized protein LOC100782...   112   3e-23
ref|XP_002527215.1| DNA binding protein, putative [Ricinus commu...   110   9e-23

>ref|XP_002265108.2| PREDICTED: uncharacterized protein LOC100252003 [Vitis vinifera]
          Length = 825

 Score =  117 bits (292), Expect = 1e-24
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 3/81 (3%)
 Frame = +1

Query: 4   MDKEQKLEWDEAQKIVISEDLVDAARKQLKFLATVDKNRGLYDGPVLERAIYRYKTCWLP 183
           M+KEQ+LEW EAQKIVISEDLV  A+ QL+FLA VDK+R LYDGP L++AIYRY  CWLP
Sbjct: 1   MEKEQELEWLEAQKIVISEDLVAVAKMQLQFLAVVDKHRCLYDGPTLQKAIYRYNACWLP 60

Query: 184 LLAK---SEIADGPLVVPLDC 237
           LLAK   S+I  GPLVVP+DC
Sbjct: 61  LLAKHSESQIFKGPLVVPVDC 81


>ref|XP_003517161.1| PREDICTED: uncharacterized protein LOC100810300 [Glycine max]
          Length = 852

 Score =  115 bits (287), Expect = 5e-24
 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 3/81 (3%)
 Frame = +1

Query: 4   MDKEQKLEWDEAQKIVISEDLVDAARKQLKFLATVDKNRGLYDGPVLERAIYRYKTCWLP 183
           M+ +Q++EW+EAQKI IS DL   A+KQL+FLATVDKNR LYDGP L+RAIYRY  CW+P
Sbjct: 1   MEPQQEMEWNEAQKIPISVDLEVVAKKQLQFLATVDKNRHLYDGPALDRAIYRYNACWIP 60

Query: 184 LLAK---SEIADGPLVVPLDC 237
           LLAK   S I +GPLVVPLDC
Sbjct: 61  LLAKHSESPIFEGPLVVPLDC 81


>ref|XP_003612947.1| Glycine-rich protein [Medicago truncatula]
           gi|163889366|gb|ABY48136.1| glycine-rich protein
           [Medicago truncatula] gi|355514282|gb|AES95905.1|
           Glycine-rich protein [Medicago truncatula]
          Length = 897

 Score =  114 bits (285), Expect = 8e-24
 Identities = 56/81 (69%), Positives = 65/81 (80%), Gaps = 3/81 (3%)
 Frame = +1

Query: 4   MDKEQKLEWDEAQKIVISEDLVDAARKQLKFLATVDKNRGLYDGPVLERAIYRYKTCWLP 183
           M+ EQ+  W+EAQKI +S DLVD A+KQL+FLA VD+NR LYDGP L+RAIYRY  CWLP
Sbjct: 1   MEAEQEHAWNEAQKIGMSVDLVDVAKKQLQFLAAVDRNRHLYDGPALDRAIYRYNACWLP 60

Query: 184 LLAK---SEIADGPLVVPLDC 237
           LLAK   S I +GPLVVPLDC
Sbjct: 61  LLAKHSESRIFEGPLVVPLDC 81


>ref|XP_003534259.1| PREDICTED: uncharacterized protein LOC100782361 [Glycine max]
          Length = 827

 Score =  112 bits (280), Expect = 3e-23
 Identities = 54/81 (66%), Positives = 65/81 (80%), Gaps = 3/81 (3%)
 Frame = +1

Query: 4   MDKEQKLEWDEAQKIVISEDLVDAARKQLKFLATVDKNRGLYDGPVLERAIYRYKTCWLP 183
           M+ +Q++EW+EAQKI IS DL+  A+KQL+FLA VD+NR LYDGP LERAIYRY  CWLP
Sbjct: 1   MEPQQEMEWNEAQKIPISVDLIVVAKKQLQFLAAVDRNRHLYDGPALERAIYRYNACWLP 60

Query: 184 LLAK---SEIADGPLVVPLDC 237
           LLAK   + I +GPL VPLDC
Sbjct: 61  LLAKHSETPIFEGPLEVPLDC 81


>ref|XP_002527215.1| DNA binding protein, putative [Ricinus communis]
           gi|223533391|gb|EEF35141.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 871

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/81 (67%), Positives = 64/81 (79%), Gaps = 3/81 (3%)
 Frame = +1

Query: 4   MDKEQKLEWDEAQKIVISEDLVDAARKQLKFLATVDKNRGLYDGPVLERAIYRYKTCWLP 183
           M+KEQ+L W EAQKI IS DL+ AA++QL FLA VDKNR LYDGP L+ AIYRY  CWLP
Sbjct: 1   MEKEQELVWVEAQKIGISIDLLAAAKQQLLFLAAVDKNRWLYDGPTLDHAIYRYNVCWLP 60

Query: 184 LLAK---SEIADGPLVVPLDC 237
           LLAK   S + +GPLV+PLDC
Sbjct: 61  LLAKHSESPVFEGPLVIPLDC 81


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