BLASTX nr result
ID: Coptis25_contig00004261
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00004261 (2286 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI30135.3| unnamed protein product [Vitis vinifera] 640 0.0 ref|XP_002308888.1| predicted protein [Populus trichocarpa] gi|2... 632 e-178 ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containi... 620 e-175 ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containi... 607 e-171 ref|XP_003624990.1| Pentatricopeptide repeat-containing protein ... 597 e-168 >emb|CBI30135.3| unnamed protein product [Vitis vinifera] Length = 624 Score = 640 bits (1651), Expect = 0.0 Identities = 342/649 (52%), Positives = 443/649 (68%), Gaps = 27/649 (4%) Frame = -1 Query: 2169 MWALRRTINPCR--GYHVGAFRACGFKLDTLTNDLDHAAETCNLTQFVPNGSLSVPKSFY 1996 MWALRR+ N + G+ +G +AC K + L+ C Q + + LS K FY Sbjct: 1 MWALRRSSNRLKNQGFSIGTLQACHAKSEMLSTYYKDMTGICKSPQVINDCHLSSRK-FY 59 Query: 1995 ESPSAVGKLSFGSRGLSSQAGAXXXXXXXXXXXXXXXXETPLSDVTEEVTAEEDIEDLIS 1816 S GS SSQAGA + E+D+ED S Sbjct: 60 HPTDIYSVFSMGSCSFSSQAGA------------------------KSSGEEDDLEDGFS 95 Query: 1815 EPELSG--------------EDDILTEDPHDEHDI---------VDTKQGVSDGVPPKKA 1705 E E SG ED++L++ D+ +I +DT VS+ P+K Sbjct: 96 ELEASGNAGGFQDSDAESEHEDELLSDPKSDDDEIESTQNELEPLDTDTDVSEKRSPRKR 155 Query: 1704 ASSDLFKVILIATRYTLNDVLDKWLERGNTLNRNEISLVMLNLRKRRFYGKALQFSEWLE 1525 SS+LFK I+ A+ ++ VL+KW + G ++R EI+ MLNLRK R + KALQFSEW+E Sbjct: 156 VSSELFKAIMAASDQPIHSVLNKWDQEGKDMSRAEIAQTMLNLRKIRMFLKALQFSEWME 215 Query: 1524 KKRTFD--ERDYASRLDLIAKVLGLYKAEAYVKDVPESFRGEVLYRTLLANCVVAGNKEK 1351 + + D ERDYASR+DLIAKV GL KAE Y++ +P+SFRGE++YRTLLANCV N +K Sbjct: 216 EHKKLDMVERDYASRVDLIAKVRGLQKAEHYIEKIPKSFRGELVYRTLLANCVSTTNAKK 275 Query: 1350 AEDVFNKMKKLELQITAFACNQXXXXXXXXXXXKIADVLKLMELQNIRLSAFTYRLLIDA 1171 AE+VFNKMK L IT FACNQ KIADVL LME ++++ S FTY LLID Sbjct: 276 AEEVFNKMKDLGFPITTFACNQLLLLYKRVDKKKIADVLLLMEKEDVKPSLFTYGLLIDT 335 Query: 1170 RGQANDIEGMEKCVETMKEDGFEPDMQTQGLLVRHYVTGGFTEKAEAILKEMEGTNLKEN 991 +GQ+NDI GME+ VETMK +G EP++Q Q +LVRHYV GG EKAEAILKEMEG NLKEN Sbjct: 336 KGQSNDITGMEQIVETMKAEGIEPNLQVQSILVRHYVFGGLKEKAEAILKEMEGGNLKEN 395 Query: 990 RWACRILLPLYAELGMDKEVGRIWKICDPNPHVEECLAAIEAWGKVGKVEEAEAVFDRMT 811 RW CR+LLP YA LG +V RIWK+C+ NP + E +AAIEA+GK+ KVEEAEA+F++M+ Sbjct: 396 RWVCRVLLPPYAALGKADDVERIWKVCESNPRLPEFVAAIEAYGKLKKVEEAEAIFNKMS 455 Query: 810 QTWKKLSSRNYTTLLKVYANHKMLTKGKDLAKRMAESGQRLDPFTWDALVKLYVEAGEVE 631 +T+K+LSS++Y+ LLKVYA+HKML KGKDL K+M++SG R+ P TWDALVKLYVEAGEVE Sbjct: 456 KTFKRLSSKHYSALLKVYADHKMLIKGKDLVKQMSDSGCRIGPLTWDALVKLYVEAGEVE 515 Query: 630 KADSILQKSSQQNQLKPMFSSYMYIMEQYAKRGDVHNAEKIFNRLKQSGYVGRLRQYSAL 451 KAD ILQK+ QQ+ +KPMFS+YM IM+QYAKRGD+HN+EK+F++++QSGYV RLRQ+ L Sbjct: 516 KADKILQKAMQQSPIKPMFSTYMAIMDQYAKRGDIHNSEKMFHQMRQSGYVSRLRQFQCL 575 Query: 450 LDTYVKAKVPAYGFRDRMKGDNIFPNKPMQAKLAKVDAFRKTAISDILD 304 + YV AK PAYG ++RMK DNIFPN+ + +LA+VDAFRK+A+SD+LD Sbjct: 576 IQAYVNAKAPAYGIKERMKADNIFPNRVVAGQLAQVDAFRKSAVSDLLD 624 >ref|XP_002308888.1| predicted protein [Populus trichocarpa] gi|222854864|gb|EEE92411.1| predicted protein [Populus trichocarpa] Length = 555 Score = 632 bits (1629), Expect = e-178 Identities = 318/555 (57%), Positives = 412/555 (74%), Gaps = 4/555 (0%) Frame = -1 Query: 1956 RGLSSQAGAXXXXXXXXXXXXXXXXETPLSDVTEEVTAEEDIED-LISEPELSGED-DIL 1783 RG +SQAGA ETP + V A ED LISEPELS +D D + Sbjct: 1 RGFASQAGAENSGSDDDLEDGFSELETPANANESTVNALAGNEDQLISEPELSDDDNDDI 60 Query: 1782 TEDPHDEHDIVDTKQGVSDGVPPKKAASSDLFKVILIATRYTLNDVLDKWLERGNTLNRN 1603 E + ++ D + P+K +++LF I+ A+ ++ VLDKW+ G L+R Sbjct: 61 GEPSQNALELSDNETDSVVKSLPRKRPTTELFNAIVSASDVSVQSVLDKWVAEGKDLDRL 120 Query: 1602 EISLVMLNLRKRRFYGKALQFSEWLE--KKRTFDERDYASRLDLIAKVLGLYKAEAYVKD 1429 EIS M+NLRKRR +G+ALQ SEW E K + F ERDYASRLDLIAKV GL+KAE Y+ Sbjct: 121 EISNAMINLRKRRMFGRALQLSEWFEANKPQEFVERDYASRLDLIAKVRGLHKAEVYIDK 180 Query: 1428 VPESFRGEVLYRTLLANCVVAGNKEKAEDVFNKMKKLELQITAFACNQXXXXXXXXXXXK 1249 +P+SF+GEV+YRTLLANCVV N +KAE+VFNKM+ LE IT FACNQ K Sbjct: 181 IPKSFKGEVIYRTLLANCVVDHNVKKAEEVFNKMRDLEFPITPFACNQLLLLYKRLDKKK 240 Query: 1248 IADVLKLMELQNIRLSAFTYRLLIDARGQANDIEGMEKCVETMKEDGFEPDMQTQGLLVR 1069 IADVL LME +N++ S FTY++LID +GQ+ND+ GM++ VETMK +G EPD++TQ ++ R Sbjct: 241 IADVLLLMEKENVKPSLFTYKILIDTKGQSNDMTGMDQIVETMKAEGIEPDIRTQAIMAR 300 Query: 1068 HYVTGGFTEKAEAILKEMEGTNLKENRWACRILLPLYAELGMDKEVGRIWKICDPNPHVE 889 HYV+GG EKAEAILKEMEG NL+E+RWACR +LPLY LG EV R+WK C+ +P ++ Sbjct: 301 HYVSGGLKEKAEAILKEMEGGNLEEHRWACRFMLPLYGALGKADEVSRVWKFCEKSPRLD 360 Query: 888 ECLAAIEAWGKVGKVEEAEAVFDRMTQTWKKLSSRNYTTLLKVYANHKMLTKGKDLAKRM 709 EC+AAIEAWG++ K++EAEAVF+ M++TWKKLSSR+Y+TLLKVYANHKML+KGKDL KRM Sbjct: 361 ECMAAIEAWGRLKKIDEAEAVFELMSKTWKKLSSRHYSTLLKVYANHKMLSKGKDLIKRM 420 Query: 708 AESGQRLDPFTWDALVKLYVEAGEVEKADSILQKSSQQNQLKPMFSSYMYIMEQYAKRGD 529 +SG R+ P TWDALVKLYVEAGEVEKADSIL K+ QQN++KPM+SS++ IME+YA +GD Sbjct: 421 GDSGCRIGPLTWDALVKLYVEAGEVEKADSILNKAVQQNKIKPMYSSFLIIMERYATKGD 480 Query: 528 VHNAEKIFNRLKQSGYVGRLRQYSALLDTYVKAKVPAYGFRDRMKGDNIFPNKPMQAKLA 349 +HNAEK+F+R++Q+GY R+RQ+ L+ Y+ AK P YG R+R+K D IFPNK + A+LA Sbjct: 481 IHNAEKMFHRMRQAGYQARIRQFQTLIQAYIIAKAPCYGMRERLKADGIFPNKSLAAQLA 540 Query: 348 KVDAFRKTAISDILD 304 +VDAFR+TA+SD+LD Sbjct: 541 QVDAFRRTAVSDLLD 555 >ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Vitis vinifera] Length = 587 Score = 620 bits (1600), Expect = e-175 Identities = 329/608 (54%), Positives = 423/608 (69%), Gaps = 25/608 (4%) Frame = -1 Query: 2052 CNLTQFVPNGSLSVPKSFYESPSAVGKLSFGSRGLSSQAGAXXXXXXXXXXXXXXXXETP 1873 C Q + + LS K FY S GS SSQAGA Sbjct: 5 CKSPQVINDCHLSSRK-FYHPTDIYSVFSMGSCSFSSQAGA------------------- 44 Query: 1872 LSDVTEEVTAEEDIEDLISEPELSG--------------EDDILTEDPHDEHDI------ 1753 + E+D+ED SE E SG ED++L++ D+ +I Sbjct: 45 -----KSSGEEDDLEDGFSELEASGNAGGFQDSDAESEHEDELLSDPKSDDDEIESTQNE 99 Query: 1752 ---VDTKQGVSDGVPPKKAASSDLFKVILIATRYTLNDVLDKWLERGNTLNRNEISLVML 1582 +DT VS+ P+K SS+LFK I+ A+ ++ VL+KW + G ++R EI+ ML Sbjct: 100 LEPLDTDTDVSEKRSPRKRVSSELFKAIMAASDQPIHSVLNKWDQEGKDMSRAEIAQTML 159 Query: 1581 NLRKRRFYGKALQFSEWLEKKRTFD--ERDYASRLDLIAKVLGLYKAEAYVKDVPESFRG 1408 NLRK R + KALQFSEW+E+ + D ERDYASR+DLIAKV GL KAE Y++ +P+SFRG Sbjct: 160 NLRKIRMFLKALQFSEWMEEHKKLDMVERDYASRVDLIAKVRGLQKAEHYIEKIPKSFRG 219 Query: 1407 EVLYRTLLANCVVAGNKEKAEDVFNKMKKLELQITAFACNQXXXXXXXXXXXKIADVLKL 1228 E++YRTLLANCV N +KAE+VFNKMK L IT FACNQ KIADVL L Sbjct: 220 ELVYRTLLANCVSTTNAKKAEEVFNKMKDLGFPITTFACNQLLLLYKRVDKKKIADVLLL 279 Query: 1227 MELQNIRLSAFTYRLLIDARGQANDIEGMEKCVETMKEDGFEPDMQTQGLLVRHYVTGGF 1048 ME ++++ S FTY LLID +GQ+NDI GME+ VETMK +G EP++Q Q +LVRHYV GG Sbjct: 280 MEKEDVKPSLFTYGLLIDTKGQSNDITGMEQIVETMKAEGIEPNLQVQSILVRHYVFGGL 339 Query: 1047 TEKAEAILKEMEGTNLKENRWACRILLPLYAELGMDKEVGRIWKICDPNPHVEECLAAIE 868 EKAEAILKEMEG NLKENRW CR+LLP YA LG +V RIWK+C+ NP + E +AAIE Sbjct: 340 KEKAEAILKEMEGGNLKENRWVCRVLLPPYAALGKADDVERIWKVCESNPRLPEFVAAIE 399 Query: 867 AWGKVGKVEEAEAVFDRMTQTWKKLSSRNYTTLLKVYANHKMLTKGKDLAKRMAESGQRL 688 A+GK+ KVEEAEA+F++M++T+K+LSS++Y+ LLKVYA+HKML KGKDL K+M++SG R+ Sbjct: 400 AYGKLKKVEEAEAIFNKMSKTFKRLSSKHYSALLKVYADHKMLIKGKDLVKQMSDSGCRI 459 Query: 687 DPFTWDALVKLYVEAGEVEKADSILQKSSQQNQLKPMFSSYMYIMEQYAKRGDVHNAEKI 508 P TWDALVKLYVEAGEVEKAD ILQK+ QQ+ +KPMFS+YM IM+QYAKRGD+HN+EK+ Sbjct: 460 GPLTWDALVKLYVEAGEVEKADKILQKAMQQSPIKPMFSTYMAIMDQYAKRGDIHNSEKM 519 Query: 507 FNRLKQSGYVGRLRQYSALLDTYVKAKVPAYGFRDRMKGDNIFPNKPMQAKLAKVDAFRK 328 F++++QSGYV RLRQ+ L+ YV AK PAYG ++RMK DNIFPN+ + +LA+VDAFRK Sbjct: 520 FHQMRQSGYVSRLRQFQCLIQAYVNAKAPAYGIKERMKADNIFPNRVVAGQLAQVDAFRK 579 Query: 327 TAISDILD 304 +A+SD+LD Sbjct: 580 SAVSDLLD 587 >ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Glycine max] Length = 609 Score = 607 bits (1565), Expect = e-171 Identities = 332/636 (52%), Positives = 429/636 (67%), Gaps = 14/636 (2%) Frame = -1 Query: 2169 MWALRRT---INPCRGYHVGAFRACGFKLDTLTNDLDHAAETCNLTQFVPNGSLSVPKSF 1999 MW LRR ++ +G + GA RA KL +T + ++ A Q + LS +F Sbjct: 1 MWTLRRASLRLSTSQGLNAGATRASAVKLVPITVE-ENEAGIPQSRQITHSRFLSAD-TF 58 Query: 1998 YESPSAVGKLSFGSRGLSSQAGAXXXXXXXXXXXXXXXXETPLSDVTEEVTAEEDIEDLI 1819 + K + G+R LSSQAGA T + D +D+E + Sbjct: 59 CRTGRVSLKFAVGTRELSSQAGASS---------------TKVDD--------DDLEGGL 95 Query: 1818 SEPELSGEDDILTEDPHDEHDI----VDTKQGVSDGVPPKKAAS-----SDLFKVILIAT 1666 SE E+ G +D D DE + VD + +SD P KK + S+LFK I A Sbjct: 96 SELEIQGSNDESDADLSDEDEDGGKPVD-EMDLSDADPTKKKSQGRRTQSELFKAIANAP 154 Query: 1665 RYTLNDVLDKWLERGNTLNRNEISLVMLNLRKRRFYGKALQFSEWLE--KKRTFDERDYA 1492 +++ L+KW+E G L+R EI L + LR+R+ YG+A Q +WLE KK F E DYA Sbjct: 155 GLSVDSALNKWVEHGKELSRKEILLAVRELRRRKMYGRAFQLFQWLESNKKLEFMESDYA 214 Query: 1491 SRLDLIAKVLGLYKAEAYVKDVPESFRGEVLYRTLLANCVVAGNKEKAEDVFNKMKKLEL 1312 S+LDLIAK+ GL KAE Y++ VPESFRGE+LYRTLLANC N E +FNKMK L+L Sbjct: 215 SQLDLIAKLRGLPKAEKYIESVPESFRGELLYRTLLANCASQNNLIATEKIFNKMKDLDL 274 Query: 1311 QITAFACNQXXXXXXXXXXXKIADVLKLMELQNIRLSAFTYRLLIDARGQANDIEGMEKC 1132 +TAFACNQ KIADVL LME +N++ S FTYR+LID++GQ+NDI GME+ Sbjct: 275 PLTAFACNQLLLLYKKLDKKKIADVLLLMEKENVKPSLFTYRILIDSKGQSNDIAGMEQV 334 Query: 1131 VETMKEDGFEPDMQTQGLLVRHYVTGGFTEKAEAILKEMEGTNLKENRWACRILLPLYAE 952 ETMKE+GFEPD+Q Q LL RHY + G EKAEA+LKEMEG NLKEN+W C LL LYA Sbjct: 335 FETMKEEGFEPDIQIQALLARHYTSSGLKEKAEAMLKEMEGENLKENQWVCATLLRLYAN 394 Query: 951 LGMDKEVGRIWKICDPNPHVEECLAAIEAWGKVGKVEEAEAVFDRMTQTWKKLSSRNYTT 772 LG EV RIWK+C+ P VE+CLAA+EAWGK+ K+EEAEAVF+ +++ W KL+S+NY+ Sbjct: 395 LGKADEVERIWKVCESKPRVEDCLAAVEAWGKLNKIEEAEAVFEMVSKKW-KLNSKNYSV 453 Query: 771 LLKVYANHKMLTKGKDLAKRMAESGQRLDPFTWDALVKLYVEAGEVEKADSILQKSSQQN 592 LLK+YAN+KMLTKGK+L K MA+SG R+ P TWDALVKLY++AGEVEKADSIL K+ QQN Sbjct: 454 LLKIYANNKMLTKGKELVKLMADSGVRIGPLTWDALVKLYIQAGEVEKADSILHKAIQQN 513 Query: 591 QLKPMFSSYMYIMEQYAKRGDVHNAEKIFNRLKQSGYVGRLRQYSALLDTYVKAKVPAYG 412 QL+PMF++Y+ I+EQYAKRGDVHN+EKIF +++Q+GY R+ Q+ L+ YV AKVPAYG Sbjct: 514 QLQPMFTTYLAILEQYAKRGDVHNSEKIFLKMRQAGYTSRISQFQVLIQAYVNAKVPAYG 573 Query: 411 FRDRMKGDNIFPNKPMQAKLAKVDAFRKTAISDILD 304 R+R+K DN+FPNK + +LA VDAFRK A+SD+LD Sbjct: 574 IRERIKADNLFPNKTLANQLALVDAFRKNAVSDLLD 609 >ref|XP_003624990.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355500005|gb|AES81208.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 623 Score = 597 bits (1539), Expect = e-168 Identities = 320/636 (50%), Positives = 423/636 (66%), Gaps = 14/636 (2%) Frame = -1 Query: 2169 MWALRRTINPCRGYHVGAFRACGFKLDTLTNDLDHAAETCNLTQFVPNGSLSVPKSFYES 1990 MWALRR R R KL T+ D + + S Y S Sbjct: 1 MWALRRASLSLRNKSFNV-RVSSVKLLPNTSVEDESGVFDSPKMVCAKCGFSSMNLCYCS 59 Query: 1989 PSAVG----KLSFGSRGLSSQAGAXXXXXXXXXXXXXXXXE-TPLSDVTEE-VTAEEDIE 1828 S G K S G G SS+AGA TPL + +E+ V ++ + Sbjct: 60 GSNSGHGFLKFSLGRLGFSSEAGAKTTKEEDDDLEDGFSELETPLGEESEKGVVSDSEDS 119 Query: 1827 DLISEPELSGEDDILTEDPHDE------HDIVDTKQGVSDGVPPKKAASSDLFKVILIAT 1666 D E E++G PH+E HD+ + G +K A S+LFK I+ T Sbjct: 120 DESDESEITG--------PHNELELPLSHDVDEVSTGKRSS---RKRADSELFKAIMNGT 168 Query: 1665 RYTLNDVLDKWLERGNTLNRNEISLVMLNLRKRRFYGKALQFSEWLEKKR--TFDERDYA 1492 T+ L+KW+E G L+R EISL M+NLR+R+ Y KALQ SEWLE K+ F ERDYA Sbjct: 169 GPTIYTALEKWVEDGKELSREEISLTMINLRRRKIYLKALQLSEWLESKKHLEFVERDYA 228 Query: 1491 SRLDLIAKVLGLYKAEAYVKDVPESFRGEVLYRTLLANCVVAGNKEKAEDVFNKMKKLEL 1312 S+LDLIAK+ GL+KAE Y++ +PESFRGE++YRTLLANCV N +KAE++FNKMK LE Sbjct: 229 SQLDLIAKLHGLHKAEVYIEKIPESFRGEIIYRTLLANCVTQNNLKKAEEIFNKMKDLEF 288 Query: 1311 QITAFACNQXXXXXXXXXXXKIADVLKLMELQNIRLSAFTYRLLIDARGQANDIEGMEKC 1132 +T FACNQ KIADVL LME +N++ S T+++LID +GQ+NDI+GM++ Sbjct: 289 PLTPFACNQLLLLYKRTDKKKIADVLLLMEQENVKPSPLTFKILIDVKGQSNDIDGMDQI 348 Query: 1131 VETMKEDGFEPDMQTQGLLVRHYVTGGFTEKAEAILKEMEGTNLKENRWACRILLPLYAE 952 V+ M+ +G EPD T+ +LV HY++GG +KA+ +LKEMEG NLKENRW CR+LL LYA+ Sbjct: 349 VDQMRAEGIEPDNYTKAVLVGHYISGGHDDKAKMLLKEMEGENLKENRWVCRLLLALYAK 408 Query: 951 LGMDKEVGRIWKICDPNPHVEECLAAIEAWGKVGKVEEAEAVFDRMTQTWKKLSSRNYTT 772 LGM EVGR+WK+C+ P VE+C+AAIEAWGK+ K++EAEAVF+ M + W KL+S+N + Sbjct: 409 LGMADEVGRVWKVCETRPSVEDCVAAIEAWGKLKKIDEAEAVFEVMARKW-KLTSKNCSV 467 Query: 771 LLKVYANHKMLTKGKDLAKRMAESGQRLDPFTWDALVKLYVEAGEVEKADSILQKSSQQN 592 LL VYAN+KMLTKGKDL KRMA G R+ P TW+ALVKLYV+AGEVEKADS+LQK+ QQ+ Sbjct: 468 LLNVYANNKMLTKGKDLIKRMAHKGCRIGPLTWNALVKLYVQAGEVEKADSVLQKAIQQS 527 Query: 591 QLKPMFSSYMYIMEQYAKRGDVHNAEKIFNRLKQSGYVGRLRQYSALLDTYVKAKVPAYG 412 ++P+FSSY ++E+Y+KRGD+HN+EKIF R+KQ+GY+ RL+QY L++ Y +A VPAYG Sbjct: 528 PVRPIFSSYNTLLEEYSKRGDIHNSEKIFYRMKQAGYISRLKQYQILIEAYRRANVPAYG 587 Query: 411 FRDRMKGDNIFPNKPMQAKLAKVDAFRKTAISDILD 304 RDR+K DN+FPNK + L +VD F+KT SD+LD Sbjct: 588 IRDRLKADNVFPNKTLANLLVQVDGFKKTQASDLLD 623