BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004219
         (1609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3...   419   e-114
emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera]   418   e-114
ref|XP_004162315.1| PREDICTED: 60S ribosomal export protein NMD3...   411   e-112
ref|XP_004143504.1| PREDICTED: 60S ribosomal export protein NMD3...   411   e-112
ref|XP_003538383.1| PREDICTED: 60S ribosomal export protein NMD3...   393   e-107

>ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3-like [Vitis vinifera]
          Length = 510

 Score =  419 bits (1077), Expect = e-114
 Identities = 194/243 (79%), Positives = 223/243 (91%)
 Frame = +1

Query: 1   LQKSLIIMFCPECKKFLQPPRTWIRAELESKELLTFCIKRLKNLNKVRLVNAEFVWTEPH 180
           LQK + I+ CPEC  +LQPP+TWI+A+LESKELLTFC+KRLKNLNKVRL++AEF+WTEPH
Sbjct: 48  LQKHVTIVHCPECDTYLQPPKTWIKAQLESKELLTFCVKRLKNLNKVRLIHAEFIWTEPH 107

Query: 181 SKRIKVKLNVQKEVLNGVKLEQAYIAEYVVTDHMCESCSRVQANPDQWVAAVQLRQHVSH 360
           SKRIKVKL VQKEVLNG  LEQAYI E+V  +HMCESCSRVQANPDQWVA+VQLRQHV H
Sbjct: 108 SKRIKVKLRVQKEVLNGAILEQAYIVEFVQQEHMCESCSRVQANPDQWVASVQLRQHVPH 167

Query: 361 RRSFFYLEQLILKHDAAVRAIKIKQMDEGIDFFFSSRSHALKFLEFVGKVVPIKSRTDKQ 540
           RR+FFYLEQLIL+HDAA RAIKIKQMD+GIDFFF++RSH +KF+EF+GKV P +SR DKQ
Sbjct: 168 RRTFFYLEQLILRHDAAGRAIKIKQMDQGIDFFFANRSHGVKFVEFIGKVTPSRSRHDKQ 227

Query: 541 LVSHDTKSNDYNYKHTFSVEICPVCREDLVCLPPKVAVGLGNLGPLVLCAKVTNNIVLVD 720
           LVSHDTKSN+YNYK+TFSVEICP+CREDL+CLPPKVAV LGNLGPLV+C KV+NNI L+D
Sbjct: 228 LVSHDTKSNNYNYKYTFSVEICPICREDLICLPPKVAVSLGNLGPLVICTKVSNNIALLD 287

Query: 721 PFT 729
           PFT
Sbjct: 288 PFT 290



 Score =  279 bits (713), Expect = 2e-72
 Identities = 137/174 (78%), Positives = 150/174 (86%)
 Frame = +2

Query: 857  LVEYIVLDXXXXXXXXXXXXXKYALADVQVARVSDFGKNDKIFNIRTHLGHLLNPGDYAL 1036
            LVEYIVLD             KYALAD QVARVSDFGKND IFNIRTHLGHLLNPGD+AL
Sbjct: 315  LVEYIVLDVEIVSSEVNVGGSKYALADAQVARVSDFGKNDTIFNIRTHLGHLLNPGDHAL 374

Query: 1037 GYDLYVANHNDIELDKYKNLVLPDAILIKKSYEEKRLKKRGKPRSWKLKSMNMEVDNSAR 1216
            GYD+Y AN ND+EL+KY+  VLP+AILIKKSYEEKR +KRGKPRSWKLKS+NMEVD+S  
Sbjct: 375  GYDVYAANSNDMELEKYRGFVLPEAILIKKSYEEKRQRKRGKPRSWKLKSLNMEVDDSKG 434

Query: 1217 RLDEEKMNTEYEEFLRDLEENPELRFNISLYRNKEYQPSEMASVTDGEDVPSVP 1378
            R D+EKMNTEYE FLRDLEE+PELRFNISLYRNKEYQPSEMAS+TDGED+PSVP
Sbjct: 435  RADQEKMNTEYEVFLRDLEEDPELRFNISLYRNKEYQPSEMASMTDGEDLPSVP 488


>emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera]
          Length = 594

 Score =  418 bits (1074), Expect = e-114
 Identities = 193/243 (79%), Positives = 223/243 (91%)
 Frame = +1

Query: 1   LQKSLIIMFCPECKKFLQPPRTWIRAELESKELLTFCIKRLKNLNKVRLVNAEFVWTEPH 180
           LQK + I+ CPEC  +LQPP+TWI+A+LESKELLTFC+KRLKNLNKVRL++AEF+WTEPH
Sbjct: 48  LQKHVTIVHCPECDTYLQPPKTWIKAQLESKELLTFCVKRLKNLNKVRLIHAEFIWTEPH 107

Query: 181 SKRIKVKLNVQKEVLNGVKLEQAYIAEYVVTDHMCESCSRVQANPDQWVAAVQLRQHVSH 360
           SKRIKVKL VQKEVLNG  LEQAYI E+V  +HMCESCSRVQANPDQWVA+VQLRQHV H
Sbjct: 108 SKRIKVKLRVQKEVLNGAILEQAYIVEFVQQEHMCESCSRVQANPDQWVASVQLRQHVPH 167

Query: 361 RRSFFYLEQLILKHDAAVRAIKIKQMDEGIDFFFSSRSHALKFLEFVGKVVPIKSRTDKQ 540
           RR+FFYLEQLIL+HDAA RAIKIKQMD+GIDFFF++RSH +KF+EF+GKV P +SR DKQ
Sbjct: 168 RRTFFYLEQLILRHDAAGRAIKIKQMDQGIDFFFANRSHGVKFVEFIGKVTPSRSRHDKQ 227

Query: 541 LVSHDTKSNDYNYKHTFSVEICPVCREDLVCLPPKVAVGLGNLGPLVLCAKVTNNIVLVD 720
           LVSHDTKSN+YNYK+TFSVEICP+CREDL+CLPPKVAV LGNLGP+V+C KV+NNI L+D
Sbjct: 228 LVSHDTKSNNYNYKYTFSVEICPICREDLICLPPKVAVSLGNLGPVVICTKVSNNIALLD 287

Query: 721 PFT 729
           PFT
Sbjct: 288 PFT 290



 Score =  279 bits (713), Expect = 2e-72
 Identities = 137/174 (78%), Positives = 150/174 (86%)
 Frame = +2

Query: 857  LVEYIVLDXXXXXXXXXXXXXKYALADVQVARVSDFGKNDKIFNIRTHLGHLLNPGDYAL 1036
            LVEYIVLD             KYALAD QVARVSDFGKND IFNIRTHLGHLLNPGD+AL
Sbjct: 315  LVEYIVLDVEIVSSEVNVGGSKYALADAQVARVSDFGKNDTIFNIRTHLGHLLNPGDHAL 374

Query: 1037 GYDLYVANHNDIELDKYKNLVLPDAILIKKSYEEKRLKKRGKPRSWKLKSMNMEVDNSAR 1216
            GYD+Y AN ND+EL+KY+  VLP+AILIKKSYEEKR +KRGKPRSWKLKS+NMEVD+S  
Sbjct: 375  GYDVYAANSNDMELEKYRGFVLPEAILIKKSYEEKRQRKRGKPRSWKLKSLNMEVDDSKG 434

Query: 1217 RLDEEKMNTEYEEFLRDLEENPELRFNISLYRNKEYQPSEMASVTDGEDVPSVP 1378
            R D+EKMNTEYE FLRDLEE+PELRFNISLYRNKEYQPSEMAS+TDGED+PSVP
Sbjct: 435  RADQEKMNTEYEVFLRDLEEDPELRFNISLYRNKEYQPSEMASMTDGEDLPSVP 488


>ref|XP_004162315.1| PREDICTED: 60S ribosomal export protein NMD3-like [Cucumis sativus]
          Length = 505

 Score =  411 bits (1057), Expect = e-112
 Identities = 193/243 (79%), Positives = 220/243 (90%)
 Frame = +1

Query: 1   LQKSLIIMFCPECKKFLQPPRTWIRAELESKELLTFCIKRLKNLNKVRLVNAEFVWTEPH 180
           LQK L IM CP+C+ +LQPPRTWI+A+LESKELLTFCIKRL+NLNKV+LV+AEFVWTEPH
Sbjct: 48  LQKQLTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPH 107

Query: 181 SKRIKVKLNVQKEVLNGVKLEQAYIAEYVVTDHMCESCSRVQANPDQWVAAVQLRQHVSH 360
           SKRIKVKL VQKEVL G  LEQ+Y+AEYVV DH+CESCSR+QANPDQWVA+VQLRQHV H
Sbjct: 108 SKRIKVKLKVQKEVLQGAILEQSYVAEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPH 167

Query: 361 RRSFFYLEQLILKHDAAVRAIKIKQMDEGIDFFFSSRSHALKFLEFVGKVVPIKSRTDKQ 540
           RR+FF+LEQLILKH AA  AI+IKQMD+GIDFFFS+RSH +KF+EFVGKV PI+SR DKQ
Sbjct: 168 RRTFFFLEQLILKHGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQ 227

Query: 541 LVSHDTKSNDYNYKHTFSVEICPVCREDLVCLPPKVAVGLGNLGPLVLCAKVTNNIVLVD 720
           LVSHD KSN +N+KHTFSVEI P+CREDL+CLPPKVAV LGNLGPLV+C KVTN I L+D
Sbjct: 228 LVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLD 287

Query: 721 PFT 729
           PFT
Sbjct: 288 PFT 290



 Score =  248 bits (634), Expect = 2e-63
 Identities = 123/174 (70%), Positives = 144/174 (82%)
 Frame = +2

Query: 857  LVEYIVLDXXXXXXXXXXXXXKYALADVQVARVSDFGKNDKIFNIRTHLGHLLNPGDYAL 1036
            LVEY+VLD             KY LA  QVARVSDFG+ND +F+I+THLGH+LNPGDYAL
Sbjct: 315  LVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIKTHLGHILNPGDYAL 374

Query: 1037 GYDLYVANHNDIELDKYKNLVLPDAILIKKSYEEKRLKKRGKPRSWKLKSMNMEVDNSAR 1216
            GYDLY AN ND+EL+KYK L LP+AILIKKSYEEKR +KRGKPRSWKLKS++M+VD+   
Sbjct: 375  GYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSWKLKSLSMDVDDKT- 433

Query: 1217 RLDEEKMNTEYEEFLRDLEENPELRFNISLYRNKEYQPSEMASVTDGEDVPSVP 1378
            ++DE KMN+EYE+FLRDLEENP+LRFNISLYRN+EYQPSE   +TDGED PSVP
Sbjct: 434  KVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSE---ITDGEDGPSVP 484


>ref|XP_004143504.1| PREDICTED: 60S ribosomal export protein NMD3-like [Cucumis sativus]
          Length = 505

 Score =  411 bits (1057), Expect = e-112
 Identities = 193/243 (79%), Positives = 220/243 (90%)
 Frame = +1

Query: 1   LQKSLIIMFCPECKKFLQPPRTWIRAELESKELLTFCIKRLKNLNKVRLVNAEFVWTEPH 180
           LQK L IM CP+C+ +LQPPRTWI+A+LESKELLTFCIKRL+NLNKV+LV+AEFVWTEPH
Sbjct: 48  LQKQLTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPH 107

Query: 181 SKRIKVKLNVQKEVLNGVKLEQAYIAEYVVTDHMCESCSRVQANPDQWVAAVQLRQHVSH 360
           SKRIKVKL VQKEVL G  LEQ+Y+AEYVV DH+CESCSR+QANPDQWVA+VQLRQHV H
Sbjct: 108 SKRIKVKLKVQKEVLQGAILEQSYVAEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPH 167

Query: 361 RRSFFYLEQLILKHDAAVRAIKIKQMDEGIDFFFSSRSHALKFLEFVGKVVPIKSRTDKQ 540
           RR+FF+LEQLILKH AA  AI+IKQMD+GIDFFFS+RSH +KF+EFVGKV PI+SR DKQ
Sbjct: 168 RRTFFFLEQLILKHGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQ 227

Query: 541 LVSHDTKSNDYNYKHTFSVEICPVCREDLVCLPPKVAVGLGNLGPLVLCAKVTNNIVLVD 720
           LVSHD KSN +N+KHTFSVEI P+CREDL+CLPPKVAV LGNLGPLV+C KVTN I L+D
Sbjct: 228 LVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLD 287

Query: 721 PFT 729
           PFT
Sbjct: 288 PFT 290



 Score =  246 bits (629), Expect = 9e-63
 Identities = 122/174 (70%), Positives = 143/174 (82%)
 Frame = +2

Query: 857  LVEYIVLDXXXXXXXXXXXXXKYALADVQVARVSDFGKNDKIFNIRTHLGHLLNPGDYAL 1036
            LVEY+VLD             KY LA  QVARVSDFG+ND +F+I+THLGH+LNPGDYAL
Sbjct: 315  LVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIKTHLGHILNPGDYAL 374

Query: 1037 GYDLYVANHNDIELDKYKNLVLPDAILIKKSYEEKRLKKRGKPRSWKLKSMNMEVDNSAR 1216
            GYDLY AN ND+EL+KYK L LP+AILIKKSYEEKR +K GKPRSWKLKS++M+VD+   
Sbjct: 375  GYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKHGKPRSWKLKSLSMDVDDKT- 433

Query: 1217 RLDEEKMNTEYEEFLRDLEENPELRFNISLYRNKEYQPSEMASVTDGEDVPSVP 1378
            ++DE KMN+EYE+FLRDLEENP+LRFNISLYRN+EYQPSE   +TDGED PSVP
Sbjct: 434  KVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSE---ITDGEDGPSVP 484


>ref|XP_003538383.1| PREDICTED: 60S ribosomal export protein NMD3-like [Glycine max]
          Length = 510

 Score =  393 bits (1009), Expect = e-107
 Identities = 181/246 (73%), Positives = 219/246 (89%), Gaps = 3/246 (1%)
 Frame = +1

Query: 1   LQKSLIIMFCPECKKFLQPPRTWIRAELESKELLTFCIKRLK---NLNKVRLVNAEFVWT 171
           L K L+++ CPEC+ +LQPPR+W++ +LESKELLTFC+K+L+   N NKVRLV+AEF+WT
Sbjct: 54  LLKRLVLVHCPECESYLQPPRSWVKLQLESKELLTFCLKKLQKNLNSNKVRLVHAEFIWT 113

Query: 172 EPHSKRIKVKLNVQKEVLNGVKLEQAYIAEYVVTDHMCESCSRVQANPDQWVAAVQLRQH 351
           EPHS+R+KVK+ VQKEVLNG  LEQ+Y  EYV  +HMCESCSRVQANPDQWVAAVQLRQH
Sbjct: 114 EPHSRRVKVKVKVQKEVLNGAILEQSYPVEYVQQEHMCESCSRVQANPDQWVAAVQLRQH 173

Query: 352 VSHRRSFFYLEQLILKHDAAVRAIKIKQMDEGIDFFFSSRSHALKFLEFVGKVVPIKSRT 531
           VSHRR+FFYLEQLILKH AA  AI+IKQM++GIDFFFS+RSH +KF+EF+GKV P++SR 
Sbjct: 174 VSHRRTFFYLEQLILKHGAAATAIRIKQMEQGIDFFFSNRSHGVKFVEFIGKVSPVRSRH 233

Query: 532 DKQLVSHDTKSNDYNYKHTFSVEICPVCREDLVCLPPKVAVGLGNLGPLVLCAKVTNNIV 711
           DKQLVSHD KSN+YNYK+TFSVEI P+CREDL+CLPP+VAV LGN+GPLV+C KVTN+I 
Sbjct: 234 DKQLVSHDPKSNNYNYKYTFSVEISPICREDLICLPPRVAVSLGNIGPLVICTKVTNSIA 293

Query: 712 LVDPFT 729
           L+DPFT
Sbjct: 294 LLDPFT 299



 Score =  233 bits (594), Expect = 1e-58
 Identities = 117/160 (73%), Positives = 132/160 (82%)
 Frame = +2

Query: 857  LVEYIVLDXXXXXXXXXXXXXKYALADVQVARVSDFGKNDKIFNIRTHLGHLLNPGDYAL 1036
            LVEYIVLD             KY LAD QVARVSDFGKND IFNI+THLGHLLNPGDYAL
Sbjct: 324  LVEYIVLDVETVSSEVTIGGTKYRLADAQVARVSDFGKNDTIFNIKTHLGHLLNPGDYAL 383

Query: 1037 GYDLYVANHNDIELDKYKNLVLPDAILIKKSYEEKRLKKRGKPRSWKLKSMNMEVDNSAR 1216
            GYDLY AN ND+ELDKYK  + P+AILIKKSYEEK  KKRGKPRSWKLKS+ MEVD+   
Sbjct: 384  GYDLYGANSNDMELDKYKGHI-PEAILIKKSYEEKHQKKRGKPRSWKLKSLEMEVDDKG- 441

Query: 1217 RLDEEKMNTEYEEFLRDLEENPELRFNISLYRNKEYQPSE 1336
            R+DE+KM +EYE+F++DLEENPE+RFNISLYRNKEY+PS+
Sbjct: 442  RVDEDKMVSEYEQFIQDLEENPEMRFNISLYRNKEYKPSD 481