BLASTX nr result

ID: Coptis25_contig00004128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004128
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519031.1| conserved hypothetical protein [Ricinus comm...    84   2e-14
ref|XP_002268025.2| PREDICTED: uncharacterized protein LOC100249...    80   2e-13
emb|CBI35691.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|XP_002329808.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_003542764.1| PREDICTED: uncharacterized protein LOC100789...    75   4e-12

>ref|XP_002519031.1| conserved hypothetical protein [Ricinus communis]
           gi|223541694|gb|EEF43242.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 905

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 47/71 (66%), Positives = 48/71 (67%), Gaps = 12/71 (16%)
 Frame = -2

Query: 199 KSKKTRNLKLGLKEIRNRKAQ------------TSTLMEAQEFGEMMEHVDEVNFALDGL 56
           KSKK RN KL     +N K              TSTLMEAQEFGEMMEHVDEVNFALDGL
Sbjct: 88  KSKKPRNRKLEKPNSKNNKNHNNTSNSRSLVPVTSTLMEAQEFGEMMEHVDEVNFALDGL 147

Query: 55  KKGQPARIRRA 23
           KKGQP RIRRA
Sbjct: 148 KKGQPVRIRRA 158


>ref|XP_002268025.2| PREDICTED: uncharacterized protein LOC100249879 [Vitis vinifera]
          Length = 897

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 46/71 (64%), Positives = 52/71 (73%), Gaps = 7/71 (9%)
 Frame = -2

Query: 214 KNGV-SKSKKTRNLKLGLKEIRNRKA------QTSTLMEAQEFGEMMEHVDEVNFALDGL 56
           +NGV  KSKK R  K  L   +N ++       T+TLME QEFGEMMEHVDEVNFALDGL
Sbjct: 72  ENGVVRKSKKARIGKRELGGAKNSRSLISAATATATLMETQEFGEMMEHVDEVNFALDGL 131

Query: 55  KKGQPARIRRA 23
           +KGQPARIRRA
Sbjct: 132 RKGQPARIRRA 142


>emb|CBI35691.3| unnamed protein product [Vitis vinifera]
          Length = 903

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 46/71 (64%), Positives = 52/71 (73%), Gaps = 7/71 (9%)
 Frame = -2

Query: 214 KNGV-SKSKKTRNLKLGLKEIRNRKA------QTSTLMEAQEFGEMMEHVDEVNFALDGL 56
           +NGV  KSKK R  K  L   +N ++       T+TLME QEFGEMMEHVDEVNFALDGL
Sbjct: 72  ENGVVRKSKKARIGKRELGGAKNSRSLISAATATATLMETQEFGEMMEHVDEVNFALDGL 131

Query: 55  KKGQPARIRRA 23
           +KGQPARIRRA
Sbjct: 132 RKGQPARIRRA 142


>ref|XP_002329808.1| predicted protein [Populus trichocarpa] gi|222870870|gb|EEF08001.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 42/60 (70%), Positives = 46/60 (76%)
 Frame = -2

Query: 202 SKSKKTRNLKLGLKEIRNRKAQTSTLMEAQEFGEMMEHVDEVNFALDGLKKGQPARIRRA 23
           SKSK  RN   G+    N    ++TLMEAQEFGEMMEHVDEVNFALDGLKKGQP RI+RA
Sbjct: 96  SKSKSERN---GIGN-SNLLTSSTTLMEAQEFGEMMEHVDEVNFALDGLKKGQPLRIKRA 151


>ref|XP_003542764.1| PREDICTED: uncharacterized protein LOC100789737 [Glycine max]
          Length = 865

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/38 (94%), Positives = 37/38 (97%)
 Frame = -2

Query: 136 TSTLMEAQEFGEMMEHVDEVNFALDGLKKGQPARIRRA 23
           TSTLMEAQEFGEMMEHVDEVNFALDGL+KGQP RIRRA
Sbjct: 94  TSTLMEAQEFGEMMEHVDEVNFALDGLRKGQPLRIRRA 131


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