BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004108
         (2392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266763.1| PREDICTED: F-box protein SKIP14 [Vitis vinif...   359   2e-96
emb|CBI27542.3| unnamed protein product [Vitis vinifera]              353   1e-94
ref|XP_002315636.1| predicted protein [Populus trichocarpa] gi|2...   337   9e-90
emb|CBI40086.3| unnamed protein product [Vitis vinifera]              330   8e-88
ref|XP_002270874.1| PREDICTED: F-box protein SKIP14 [Vitis vinif...   330   8e-88

>ref|XP_002266763.1| PREDICTED: F-box protein SKIP14 [Vitis vinifera]
          Length = 458

 Score =  359 bits (922), Expect = 2e-96
 Identities = 191/411 (46%), Positives = 254/411 (61%), Gaps = 26/411 (6%)
 Frame = +1

Query: 472  EDNHYHHHQGEPNDIIDLLPSDPFGMNVAATFGAITGCWFDYFQIDALXXXXXXXXXXXX 651
            +D      +   NDI+DLLPSDPFGM+++ TF AITG W +  ++D              
Sbjct: 42   DDRGGSQQESVSNDILDLLPSDPFGMDISTTFTAITG-WLEDLEVDYGGYGTDEIGTSQG 100

Query: 652  KTVMFP----VFGDIGMYECF------NNNNEDAVGFDGWVEEKGV-------------I 762
               +F     ++ +   ++        ++ ++ A GF G+ EEK V             +
Sbjct: 101  NYELFAGLNFIWNNAMRFQALPGKAWLDDKSDIACGFGGFTEEKEVADPSYNCRFGPICV 160

Query: 763  QIQQISNGLSPTTGAGASNIPNKEILEEVSGSCSSGDA---HEALFFAFGYMSVQDLLNV 933
                +S+G     GA        E   E +GSC  GD    H A+ FA GY+ ++DLL+V
Sbjct: 161  VEDVLSSGNENVCGASCQ----AEEFREFNGSCYDGDGAAPHAAVSFALGYLGLRDLLSV 216

Query: 934  ERVCKSFRSAVYGDPLLWRNICIHQPLNERIEDDGLVRLTGRAQGNLQSLSLVKCSRVTD 1113
            ERVC+S R+ V  DPLLWR+I + QPLNERI DD L++LT RAQGNLQ L LV+C R+TD
Sbjct: 217  ERVCRSLRATVQSDPLLWRSIHVDQPLNERITDDILLQLTRRAQGNLQGLHLVECPRITD 276

Query: 1114 VGLKCVLQSNPRLTMLNVPECTRISIGGIVDSLKALRSSGAPGLKHLRIGGRYDVTHEHF 1293
             GLK VL+SNPRLT L VP CTR+SI G+V+ L+A +S+G PG+KHLRIGG Y V H+HF
Sbjct: 277  DGLKRVLESNPRLTKLCVPGCTRLSIEGVVNMLRAFQSTGTPGIKHLRIGGLYGVAHKHF 336

Query: 1294 EELKALLNIDNCVRSKVSKPRIYHGHSFPSYDEDDHDIDVEICPRCENLRLVYDCPVDCC 1473
            EELK LL ID   +    KP  Y+  +F    +DD  ID+E CPRC+NLRLVYDCP D C
Sbjct: 337  EELKLLLGIDIHEQKNAHKPHFYNRGNFYLLGDDDRAIDIETCPRCQNLRLVYDCPADGC 396

Query: 1474 EVRQSSPQSCRACTICIPRCVQCGRCVLYADYVETFCLDILCLKCFELQKE 1626
            +V++++ Q CRACT+CI RCVQCGRC+   +Y ETFCL+ LC  CF+ Q +
Sbjct: 397  QVKENAAQVCRACTLCIARCVQCGRCINDGEYEETFCLEWLCSDCFKQQPQ 447


>emb|CBI27542.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score =  353 bits (906), Expect = 1e-94
 Identities = 188/388 (48%), Positives = 242/388 (62%), Gaps = 3/388 (0%)
 Frame = +1

Query: 472  EDNHYHHHQGEPNDIIDLLPSDPFGMNVAATFGAITGCWFDYFQIDALXXXXXXXXXXXX 651
            +D      +   NDI+DLLPSDPFGM+++ TF AITG W +  ++D              
Sbjct: 42   DDRGGSQQESVSNDILDLLPSDPFGMDISTTFTAITG-WLEDLEVD-------------- 86

Query: 652  KTVMFPVFGDIGMYECFNNNNEDAVGFDGWVEEKGVIQIQQISNGLSPTTGAGASNIPNK 831
                         Y  F      A+    W+++K       I+ G       GAS     
Sbjct: 87   -------------YGGFQ-----ALPGKAWLDDKS-----DIACGSGNENVCGASC--QA 121

Query: 832  EILEEVSGSCSSGDA---HEALFFAFGYMSVQDLLNVERVCKSFRSAVYGDPLLWRNICI 1002
            E   E +GSC  GD    H A+ FA GY+ ++DLL+VERVC+S R+ V  DPLLWR+I +
Sbjct: 122  EEFREFNGSCYDGDGAAPHAAVSFALGYLGLRDLLSVERVCRSLRATVQSDPLLWRSIHV 181

Query: 1003 HQPLNERIEDDGLVRLTGRAQGNLQSLSLVKCSRVTDVGLKCVLQSNPRLTMLNVPECTR 1182
             QPLNERI DD L++LT RAQGNLQ L LV+C R+TD GLK VL+SNPRLT L VP CTR
Sbjct: 182  DQPLNERITDDILLQLTRRAQGNLQGLHLVECPRITDDGLKRVLESNPRLTKLCVPGCTR 241

Query: 1183 ISIGGIVDSLKALRSSGAPGLKHLRIGGRYDVTHEHFEELKALLNIDNCVRSKVSKPRIY 1362
            +SI G+V+ L+A +S+G PG+KHLRIGG Y V H+HFEELK LL ID   +    KP  Y
Sbjct: 242  LSIEGVVNMLRAFQSTGTPGIKHLRIGGLYGVAHKHFEELKLLLGIDIHEQKNAHKPHFY 301

Query: 1363 HGHSFPSYDEDDHDIDVEICPRCENLRLVYDCPVDCCEVRQSSPQSCRACTICIPRCVQC 1542
            +  +F    +DD  ID+E CPRC+NLRLVYDCP D C+V++++ Q CRACT+CI RCVQC
Sbjct: 302  NRGNFYLLGDDDRAIDIETCPRCQNLRLVYDCPADGCQVKENAAQVCRACTLCIARCVQC 361

Query: 1543 GRCVLYADYVETFCLDILCLKCFELQKE 1626
            GRC+   +Y ETFCL+ LC  CF+ Q +
Sbjct: 362  GRCINDGEYEETFCLEWLCSDCFKQQPQ 389


>ref|XP_002315636.1| predicted protein [Populus trichocarpa] gi|222864676|gb|EEF01807.1|
            predicted protein [Populus trichocarpa]
          Length = 449

 Score =  337 bits (864), Expect = 9e-90
 Identities = 184/404 (45%), Positives = 250/404 (61%), Gaps = 36/404 (8%)
 Frame = +1

Query: 511  DIIDLLPSDPFGMNVAATFGAITGCWFDYFQIDALXXXXXXXXXXXXKTVMFPVFGDIGM 690
            DI+DLLPSDPFGM+++ TF A+TG W +  ++D              +   + +F D+  
Sbjct: 51   DILDLLPSDPFGMDISTTFTAVTG-WLEDLEVD---YGGYGRDRVSTRDGNYQLFADLNF 106

Query: 691  -------YECFNNNNEDAVGFD------GWVEEKGVIQIQQISNG-----------LSPT 798
                   ++ F  N    +GFD      G+ +E+   +  ++ N            +   
Sbjct: 107  ICNNAMWFQQFPGN----MGFDLSNVVGGYGDERS--EANEVGNAPHQEAPGSDCDMEDV 160

Query: 799  TGAGASNIPNKEI--LEEVSGS-------CSSGDA---HEALFFAFGYMSVQDLLNVERV 942
               G   I N+ +  ++E SG        CS GD    H A  FA GY+ V+DLL VE V
Sbjct: 161  LSPGNEIIDNETVGVVDESSGEFQNGHLVCSEGDKEAPHAAFAFALGYLGVRDLLVVETV 220

Query: 943  CKSFRSAVYGDPLLWRNICIHQPLNERIEDDGLVRLTGRAQGNLQSLSLVKCSRVTDVGL 1122
            C+S RS V  DPLLWR+I I QPLNE+I DD L++LT RAQGNLQ LSLV+C R+TD GL
Sbjct: 221  CRSLRSTVQSDPLLWRSIHIDQPLNEKITDDVLLQLTNRAQGNLQCLSLVECPRITDDGL 280

Query: 1123 KCVLQSNPRLTMLNVPECTRISIGGIVDSLKALRSSGAPGLKHLRIGGRYDVTHEHFEEL 1302
            K VL++NPRLT L+VP CTR+SI GIV SLKA +++G  G+KHLRIGG Y VT +HFEEL
Sbjct: 281  KHVLENNPRLTKLSVPACTRLSIEGIVTSLKAFKATGTHGVKHLRIGGLYGVTQKHFEEL 340

Query: 1303 KALLNIDNCVRSKVSKPRIYHGHSFPSYDEDDHDIDVEICPRCENLRLVYDCPVDCCEVR 1482
              LL  D+ ++    KP  YH  +     EDD  ID+E+CPRC+NLRL+YDCPV+ C+ +
Sbjct: 341  MFLLGPDSHIQQNAHKPHFYHRGNLYLSCEDDRAIDIEMCPRCQNLRLIYDCPVEGCQGK 400

Query: 1483 QSSPQSCRACTICIPRCVQCGRCVLYADYVETFCLDILCLKCFE 1614
            +   Q+CRAC++CI RCVQCGRC+  ++Y ETFCL++LC  C++
Sbjct: 401  EHPSQACRACSLCIARCVQCGRCINDSEYEETFCLELLCSDCWK 444


>emb|CBI40086.3| unnamed protein product [Vitis vinifera]
          Length = 489

 Score =  330 bits (847), Expect = 8e-88
 Identities = 185/412 (44%), Positives = 244/412 (59%), Gaps = 26/412 (6%)
 Frame = +1

Query: 508  NDIIDLLPSDPFGMNVAATFGAITGCWFDYFQIDALXXXXXXXXXXXXKTVMFPVFGDIG 687
            +DI+D LP+DPF M++  TF A  G W   F+ D++               M     D G
Sbjct: 67   DDIVDRLPADPFNMDIRTTFTAFKG-WVGDFEKDSIGFGVGEME------AMEAEGEDRG 119

Query: 688  MYECFN-------------NNNEDAVG---FDGWVEEKGVIQIQQISNGLSPTTGAGASN 819
            +Y   N             +N E +V    FDG + +K +      S  LS +      N
Sbjct: 120  LYANLNLVWSGAMRFQPEFSNAEKSVPCNEFDGLLMDKDLCD-GGFSEFLSFSRHGNRIN 178

Query: 820  IPNKEILE---EVSGSCSSGDAHEALFFAFGYMSVQDLLNVERVCKSFRSAVYGDPLLWR 990
               ++  +   +V     +G+ H+ALFF+  Y+ VQDLL VERVC+S  + V  DPLLWR
Sbjct: 179  GNQEKEFQACTKVHPDDETGEPHDALFFSLAYLGVQDLLVVERVCRSLCNVVRSDPLLWR 238

Query: 991  NICIHQPLNERIEDDGLVRLTGRAQGNLQSLSLVKCSRVTDVGLKCVLQSNPRLTMLNVP 1170
            NICI QPL+++I DD L++LTGRAQG+LQ LSLV+C R+TD GLK VL++NPRLT L VP
Sbjct: 239  NICIDQPLSDKITDDALLQLTGRAQGSLQGLSLVQCPRITDSGLKRVLENNPRLTKLCVP 298

Query: 1171 ECTRISIGGIVDSLKALRSSGAPGLKHLRIGGRYDVTHEHFEELKALLNIDNCVRSKVSK 1350
             C R+S+  I+ +LKA +S+G  G+KHLRI G   VT +HFEELK LL +DN  + +  K
Sbjct: 299  GCVRLSVDCILLNLKAFKSAGTLGIKHLRISGLNGVTDQHFEELKLLLGVDNHKQLRTHK 358

Query: 1351 PRIYHGHSFPSYDEDDHDIDVEICPRCENLRLVYDCPVDCCEVRQSSPQSCRACTICIPR 1530
            PR YHG       +DD  ID+E+CPRC+ +RLVYDCP + C+ +  S Q CRACT+CI R
Sbjct: 359  PRFYHGEQLYLSCDDDRAIDIEVCPRCQKVRLVYDCPSESCQGKHQSAQLCRACTLCIAR 418

Query: 1531 CVQCGRCVLYADYVETFCLDILCLKCF-------ELQKEERGASSNHISLDQ 1665
            C  CGRC+   DY ETFCLD+LCL CF       E Q+E    SS H    Q
Sbjct: 419  CFHCGRCINDCDYEETFCLDLLCLDCFKQLLNCQERQEEMGAPSSKHTIFHQ 470


>ref|XP_002270874.1| PREDICTED: F-box protein SKIP14 [Vitis vinifera]
          Length = 480

 Score =  330 bits (847), Expect = 8e-88
 Identities = 185/412 (44%), Positives = 244/412 (59%), Gaps = 26/412 (6%)
 Frame = +1

Query: 508  NDIIDLLPSDPFGMNVAATFGAITGCWFDYFQIDALXXXXXXXXXXXXKTVMFPVFGDIG 687
            +DI+D LP+DPF M++  TF A  G W   F+ D++               M     D G
Sbjct: 67   DDIVDRLPADPFNMDIRTTFTAFKG-WVGDFEKDSIGFGVGEME------AMEAEGEDRG 119

Query: 688  MYECFN-------------NNNEDAVG---FDGWVEEKGVIQIQQISNGLSPTTGAGASN 819
            +Y   N             +N E +V    FDG + +K +      S  LS +      N
Sbjct: 120  LYANLNLVWSGAMRFQPEFSNAEKSVPCNEFDGLLMDKDLCD-GGFSEFLSFSRHGNRIN 178

Query: 820  IPNKEILE---EVSGSCSSGDAHEALFFAFGYMSVQDLLNVERVCKSFRSAVYGDPLLWR 990
               ++  +   +V     +G+ H+ALFF+  Y+ VQDLL VERVC+S  + V  DPLLWR
Sbjct: 179  GNQEKEFQACTKVHPDDETGEPHDALFFSLAYLGVQDLLVVERVCRSLCNVVRSDPLLWR 238

Query: 991  NICIHQPLNERIEDDGLVRLTGRAQGNLQSLSLVKCSRVTDVGLKCVLQSNPRLTMLNVP 1170
            NICI QPL+++I DD L++LTGRAQG+LQ LSLV+C R+TD GLK VL++NPRLT L VP
Sbjct: 239  NICIDQPLSDKITDDALLQLTGRAQGSLQGLSLVQCPRITDSGLKRVLENNPRLTKLCVP 298

Query: 1171 ECTRISIGGIVDSLKALRSSGAPGLKHLRIGGRYDVTHEHFEELKALLNIDNCVRSKVSK 1350
             C R+S+  I+ +LKA +S+G  G+KHLRI G   VT +HFEELK LL +DN  + +  K
Sbjct: 299  GCVRLSVDCILLNLKAFKSAGTLGIKHLRISGLNGVTDQHFEELKLLLGVDNHKQLRTHK 358

Query: 1351 PRIYHGHSFPSYDEDDHDIDVEICPRCENLRLVYDCPVDCCEVRQSSPQSCRACTICIPR 1530
            PR YHG       +DD  ID+E+CPRC+ +RLVYDCP + C+ +  S Q CRACT+CI R
Sbjct: 359  PRFYHGEQLYLSCDDDRAIDIEVCPRCQKVRLVYDCPSESCQGKHQSAQLCRACTLCIAR 418

Query: 1531 CVQCGRCVLYADYVETFCLDILCLKCF-------ELQKEERGASSNHISLDQ 1665
            C  CGRC+   DY ETFCLD+LCL CF       E Q+E    SS H    Q
Sbjct: 419  CFHCGRCINDCDYEETFCLDLLCLDCFKQLLNCQERQEEMGAPSSKHTIFHQ 470