BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004106
         (1971 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80689.1| hypothetical protein VITISV_005501 [Vitis vinifera]   447   e-123
ref|XP_002285171.1| PREDICTED: double-stranded RNA-binding prote...   446   e-122
ref|NP_001241242.1| uncharacterized protein LOC100812728 [Glycin...   420   e-115
ref|XP_003538171.1| PREDICTED: double-stranded RNA-binding prote...   420   e-115
ref|XP_004139447.1| PREDICTED: double-stranded RNA-binding prote...   419   e-114

>emb|CAN80689.1| hypothetical protein VITISV_005501 [Vitis vinifera]
          Length = 403

 Score =  447 bits (1149), Expect = e-123
 Identities = 249/427 (58%), Positives = 284/427 (66%), Gaps = 11/427 (2%)
 Frame = +3

Query: 273  MYKNQLQELAQRSCFNLPSYSCIREGPDHAPRFKATVNFNGEVFESPQFCTTLRQAEHSA 452
            MYKNQLQELAQRSCFNLPSY+CIREGPDHAPRFKATVNFNGE+FESP +CTTLRQAEHSA
Sbjct: 1    MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPNYCTTLRQAEHSA 60

Query: 453  AEVALNSLSNRGPSHSLAARILDETGVYKNLLQEVSQRVGAALPQYTTVRSGLGHLPVFT 632
            AEVALNSLSNRGPSHSLAARILDETGVYKNLLQE++QRVGA LPQYTT RSGLGHLPVFT
Sbjct: 61   AEVALNSLSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 633  CTVELAGITFTGEHXXXXXXXXXXXXXXXWSSLKQLAKXXXXXXXXXXXXXXXXXVTIAR 812
             TVELAGITFTGE                WSSLKQLAK                 +TIAR
Sbjct: 121  GTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKEAASSSSETENNDELEQITIAR 180

Query: 813  ALLNYRLKEKMAMANYPNALSPFPKRFPMQHQRPSSAQPPPLTTSKILPLIRPKSVPRNR 992
            ALLNYRLKEKMA+AN P+    FPK+FP+Q+ R  S Q PP+ TSKILPLI  K+ PRNR
Sbjct: 181  ALLNYRLKEKMAIANSPSGTLSFPKKFPIQNSRLFSPQLPPVATSKILPLICQKTPPRNR 240

Query: 993  -PVVTVNHDSAQ---------PSRYVPPENRGIRPQKFPAVNATPYVPIRHFRAPYHGVA 1142
             P  T N D  Q         PS+ +  + R +RPQ+FPA  A PYVPIR FR PYHG+A
Sbjct: 241  PPSPTANDDPRQQHQVKNPVPPSQPLALDVRAVRPQRFPAAGAVPYVPIRQFRTPYHGIA 300

Query: 1143 PPVTMRTAVPVFSAPLFQSPANQPSHEMASSVRHVTPSVHIRQAVPVFSAPPIKVEKLQL 1322
            PPVT+R AVPVFSAP    P+  P   + +    + P V +RQAVPVF+APP++ E    
Sbjct: 301  PPVTIRNAVPVFSAP----PSGLPPQVIRAPHMRIAPPVCVRQAVPVFAAPPVRKED--- 353

Query: 1323 VTIPPEAESRVQMEATGNVPLVAAPQVCVEEPPALSVPQLP-KSAFPIEESSNYLQEPVT 1499
                               PLV    V  E+P A S+P LP KS   +EE+ +     + 
Sbjct: 354  -------------------PLV----VRKEDPSAASLPSLPTKSPAHVEETGSATANDLQ 390

Query: 1500 RAQVVSS 1520
              + V S
Sbjct: 391  EFEAVKS 397


>ref|XP_002285171.1| PREDICTED: double-stranded RNA-binding protein 2-like [Vitis
            vinifera]
          Length = 413

 Score =  446 bits (1147), Expect = e-122
 Identities = 249/437 (56%), Positives = 283/437 (64%), Gaps = 21/437 (4%)
 Frame = +3

Query: 273  MYKNQLQELAQRSCFNLPSYSCIREGPDHAPRFKATVNFNGEVFESPQFCTTLRQAEHSA 452
            MYKNQLQELAQRSCFNLPSY+CIREGPDHAPRFKATVNFNGE+FESP +CTTLRQAEHSA
Sbjct: 1    MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPNYCTTLRQAEHSA 60

Query: 453  AEVALNSLSNRGPSHSLAARILDETGVYKNLLQEVSQRVGAALPQYTTVRSGLGHLPVFT 632
            AEVALNSLSNRGPSHSLAARILDETGVYKNLLQE++QRVGA LPQYTT RSGLGHLPVFT
Sbjct: 61   AEVALNSLSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 633  CTVELAGITFTGEHXXXXXXXXXXXXXXXWSSLKQLAKXXXXXXXXXXXXXXXXXVTIAR 812
             TVELAGITFTGE                WSSLKQLAK                 +TIAR
Sbjct: 121  GTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKEAANSSSETENNDELEQITIAR 180

Query: 813  ALLNYRLKEKMAMANYPNALSPFPKRFPMQHQRPSSAQPPPLTTSKILPLIRPKSVPRNR 992
            ALLNYRLKEKMA+AN P+    FPK+FP+Q+ R  S Q PP+ TSKILPLI  K+ PRNR
Sbjct: 181  ALLNYRLKEKMAIANSPSGTLSFPKKFPIQNSRLFSPQLPPVATSKILPLICQKTPPRNR 240

Query: 993  PVVTVNHDSAQPSRY--------------VPPEN------RGIRPQKFPAVNATPYVPIR 1112
            P     +D + PS                VPP        R +RPQ+FPA  A PYVPIR
Sbjct: 241  PPSPTANDGSMPSSQPRSRPTSTTSSENPVPPSQPLALDVRAVRPQRFPAAGAVPYVPIR 300

Query: 1113 HFRAPYHGVAPPVTMRTAVPVFSAPLFQSPANQPSHEMASSVRHVTPSVHIRQAVPVFSA 1292
             FR PYHG+APPVT+R AVPVFSAP    P+  P   + +    + P V +RQAVPVF+A
Sbjct: 301  QFRTPYHGIAPPVTIRNAVPVFSAP----PSGLPPQVIRAPHMRIAPPVCVRQAVPVFAA 356

Query: 1293 PPIKVEKLQLVTIPPEAESRVQMEATGNVPLVAAPQVCVEEPPALSVPQLP-KSAFPIEE 1469
            PP++ E                       PLV    V  E+P A S+P LP KS   +EE
Sbjct: 357  PPVRKED----------------------PLV----VRKEDPSAASLPSLPTKSPAHVEE 390

Query: 1470 SSNYLQEPVTRAQVVSS 1520
            + +     +   + V S
Sbjct: 391  TGSATANDLQEFEAVKS 407


>ref|NP_001241242.1| uncharacterized protein LOC100812728 [Glycine max]
            gi|255644888|gb|ACU22944.1| unknown [Glycine max]
          Length = 401

 Score =  420 bits (1080), Expect = e-115
 Identities = 232/364 (63%), Positives = 261/364 (71%), Gaps = 8/364 (2%)
 Frame = +3

Query: 273  MYKNQLQELAQRSCFNLPSYSCIREGPDHAPRFKATVNFNGEVFESPQFCTTLRQAEHSA 452
            MYKNQLQELAQRSCFNLPSY+CIREGPDHAPRFKATVNFNGE+FESP +C+TLRQAEHSA
Sbjct: 1    MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 60

Query: 453  AEVALNSLSNRGPSHSLAARILDETGVYKNLLQEVSQRVGAALPQYTTVRSGLGHLPVFT 632
            AEVALNSLSNR PSHSLAARILDETGVYKNLLQE++QRVGA LPQY T RSGLGHLPVFT
Sbjct: 61   AEVALNSLSNRAPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYFTFRSGLGHLPVFT 120

Query: 633  CTVELAGITFTGEHXXXXXXXXXXXXXXXWSSLKQLAKXXXXXXXXXXXXXXXXXVTIAR 812
             TVELAGI FTGE                WSSLKQLAK                 +TIAR
Sbjct: 121  GTVELAGIMFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETARSSTEPENNDELEQITIAR 180

Query: 813  ALLNYRLKEKMAMANYPNALSPFPKRFPMQHQRPSSAQPPPLTTSKILPLIRPKSVPRNR 992
            ALLNYRLKEK++M+N  NA  PFPK+F +Q+ RP+S QPPP  TSKILPLI  K+ PR+R
Sbjct: 181  ALLNYRLKEKISMSN-SNAPVPFPKKFQIQNPRPTSPQPPPAATSKILPLICQKAAPRSR 239

Query: 993  PVVTVN------HDSAQPSRYVPPENRGIRPQKFPAVNATPYVPIRHFRAPYHGVAPPVT 1154
             +V  +       +SA P     PE+RGIR  KFPA  A PYVPIR  R P  G+APPVT
Sbjct: 240  HLVGASPARASCDNSAMPQLSATPESRGIRRPKFPAAGAAPYVPIRQMR-PCQGMAPPVT 298

Query: 1155 MRTAVPVFSAPLFQSPANQPSHEM--ASSVRHVTPSVHIRQAVPVFSAPPIKVEKLQLVT 1328
            +RTA+PVFS P     A   SH++  A  VR V P V IRQAVPVF+ PP  + K + V 
Sbjct: 299  IRTAIPVFSPP---PAAAAVSHQVLRAPHVR-VAPPVTIRQAVPVFATPPPPIRKDEPVP 354

Query: 1329 IPPE 1340
            IP +
Sbjct: 355  IPKD 358


>ref|XP_003538171.1| PREDICTED: double-stranded RNA-binding protein 2-like [Glycine max]
          Length = 411

 Score =  420 bits (1079), Expect = e-115
 Identities = 231/383 (60%), Positives = 264/383 (68%), Gaps = 6/383 (1%)
 Frame = +3

Query: 273  MYKNQLQELAQRSCFNLPSYSCIREGPDHAPRFKATVNFNGEVFESPQFCTTLRQAEHSA 452
            MYKNQLQELAQRSCFNLPSY+CIREGPDHAPRFKATVNFNGE+FESP +C+TLRQAEHSA
Sbjct: 1    MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 60

Query: 453  AEVALNSLSNRGPSHSLAARILDETGVYKNLLQEVSQRVGAALPQYTTVRSGLGHLPVFT 632
            AEVALNSLSNR PSHSLAARILDETGVYKNLLQE++QRVGA LPQY T RSGLGHLPVFT
Sbjct: 61   AEVALNSLSNRAPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYFTFRSGLGHLPVFT 120

Query: 633  CTVELAGITFTGEHXXXXXXXXXXXXXXXWSSLKQLAKXXXXXXXXXXXXXXXXXVTIAR 812
             TVELAGI FTGE                WSSLKQLAK                 +TIAR
Sbjct: 121  GTVELAGIMFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETARSSTEPENNDELEQITIAR 180

Query: 813  ALLNYRLKEKMAMANYPNALSPFPKRFPMQHQRPSSAQPPPLTTSKILPLIRPKSVPRNR 992
            ALLNYRLKEK++M+N  NA  PFPK+F +Q+ RP+S QPPP TTSKILPLI  K   R+R
Sbjct: 181  ALLNYRLKEKISMSN-SNAPVPFPKKFQIQNPRPTSPQPPPATTSKILPLICQKGAHRSR 239

Query: 993  ------PVVTVNHDSAQPSRYVPPENRGIRPQKFPAVNATPYVPIRHFRAPYHGVAPPVT 1154
                  P    + +S  P     P++RGIR  KFPA  A PYVPIR  R P  G+APPVT
Sbjct: 240  HLVAASPAPASSDNSVMPQLPATPDSRGIRRPKFPAAGAAPYVPIRQMR-PCQGMAPPVT 298

Query: 1155 MRTAVPVFSAPLFQSPANQPSHEMASSVRHVTPSVHIRQAVPVFSAPPIKVEKLQLVTIP 1334
            +RTA+PVFS P   + A      + +    V P V IRQAVPVF+APP  V K + V IP
Sbjct: 299  IRTAIPVFSPPPPPAAAAVSHQVLRAPHVRVAPPVTIRQAVPVFAAPPPPVRKDEPVPIP 358

Query: 1335 PEAESRVQMEATGNVPLVAAPQV 1403
             +    V  +   + P ++AP +
Sbjct: 359  KDEPVAVPKD---DSPTISAPSL 378


>ref|XP_004139447.1| PREDICTED: double-stranded RNA-binding protein 2-like [Cucumis
            sativus]
          Length = 414

 Score =  419 bits (1078), Expect = e-114
 Identities = 229/390 (58%), Positives = 265/390 (67%), Gaps = 2/390 (0%)
 Frame = +3

Query: 273  MYKNQLQELAQRSCFNLPSYSCIREGPDHAPRFKATVNFNGEVFESPQFCTTLRQAEHSA 452
            MYKNQLQELAQRSCFNLPSY+CIREGPDHAPRFKATVNFNGE+FE PQ+C+TLRQAEHSA
Sbjct: 1    MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 453  AEVALNSLSNRGPSHSLAARILDETGVYKNLLQEVSQRVGAALPQYTTVRSGLGHLPVFT 632
            AEVALN+LSNRGP HSLAARILDETGVYKNLLQE++QRVGA LPQYTT RSGLGHLPVFT
Sbjct: 61   AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 633  CTVELAGITFTGEHXXXXXXXXXXXXXXXWSSLKQLAKXXXXXXXXXXXXXXXXXVTIAR 812
              VELAGITFTGE                WS+LKQLAK                 +TIAR
Sbjct: 121  GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 813  ALLNYRLKEKMAMANYPNALSPFPKRFPMQHQRPSSAQPPPLTTSKILPLIRPKSVPRNR 992
            ALLNYR KEK+AM+N PNA  PF K+  +Q  RP+S Q PP  TSKILPLI  K+ PR+R
Sbjct: 181  ALLNYRQKEKLAMSN-PNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSR 239

Query: 993  PVVTVNHDSAQPSRYVPPENRGIRPQKFPAVNATPYVPIRHFRAPYHGVAPPVTMRTAVP 1172
               + N      S+    E  G RPQKF A  A  Y+P++ FR   HG+APPVT+RTA+P
Sbjct: 240  APFSANKIPIPQSQTPALEGSGPRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMP 299

Query: 1173 VFSAPLFQSPANQPSHEM--ASSVRHVTPSVHIRQAVPVFSAPPIKVEKLQLVTIPPEAE 1346
            VFSAP    P+  P  ++     +R + P V IRQA+PVF+APP++ E       PP  +
Sbjct: 300  VFSAPPLPQPSKLPPQQVIRVPPIR-IAPPVSIRQAIPVFAAPPVRKEN------PPVVK 352

Query: 1347 SRVQMEATGNVPLVAAPQVCVEEPPALSVP 1436
                       P  AAP+   E+PPALS P
Sbjct: 353  KE-------ECPAPAAPK---EDPPALSAP 372