BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004089
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882074.1| hypothetical protein ARALYDRAFT_483814 [Arab...    80   1e-13
ref|NP_566079.1| uncharacterized protein [Arabidopsis thaliana] ...    80   1e-13
gb|AFX66989.1| fiber protein Fb11 [Solanum tuberosum]                  79   3e-13
ref|NP_001148662.1| LOC100282278 [Zea mays] gi|242091243|ref|XP_...    75   4e-12
gb|AFK43416.1| unknown [Medicago truncatula]                           74   1e-11

>ref|XP_002882074.1| hypothetical protein ARALYDRAFT_483814 [Arabidopsis lyrata subsp.
           lyrata] gi|297327913|gb|EFH58333.1| hypothetical protein
           ARALYDRAFT_483814 [Arabidopsis lyrata subsp. lyrata]
          Length = 65

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/53 (71%), Positives = 44/53 (83%)
 Frame = -1

Query: 449 LRMFVAQEPVVAVSCLMAGVGLFLPAVVRPILDKYERADEAEAPPLKDVVASI 291
           LRMFVAQEPVVA SCL+ GVGLFLPAVVRPILD  E + + +APPL DV+A +
Sbjct: 7   LRMFVAQEPVVAASCLIGGVGLFLPAVVRPILDSLEASKQVKAPPLTDVIAGV 59


>ref|NP_566079.1| uncharacterized protein [Arabidopsis thaliana]
           gi|15215610|gb|AAK91350.1| F11C10.23/F11C10.23
           [Arabidopsis thaliana] gi|20197774|gb|AAD20165.2|
           expressed protein [Arabidopsis thaliana]
           gi|20334882|gb|AAM16197.1| At2g46540/F11C10.23
           [Arabidopsis thaliana] gi|21554416|gb|AAM63521.1|
           unknown [Arabidopsis thaliana]
           gi|330255624|gb|AEC10718.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 65

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/53 (71%), Positives = 44/53 (83%)
 Frame = -1

Query: 449 LRMFVAQEPVVAVSCLMAGVGLFLPAVVRPILDKYERADEAEAPPLKDVVASI 291
           LRMFVAQEPVVA SCL+ GVGLFLPAVVRPILD  E + + +APPL DV+A +
Sbjct: 7   LRMFVAQEPVVAASCLIGGVGLFLPAVVRPILDSLEASKQVKAPPLTDVIAGV 59


>gb|AFX66989.1| fiber protein Fb11 [Solanum tuberosum]
          Length = 65

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/53 (71%), Positives = 43/53 (81%)
 Frame = -1

Query: 449 LRMFVAQEPVVAVSCLMAGVGLFLPAVVRPILDKYERADEAEAPPLKDVVASI 291
           LRMFV QEPVVA SCL+AG GLFLPAVVRPILD +E + +  APPL DVVA +
Sbjct: 7   LRMFVVQEPVVAASCLIAGFGLFLPAVVRPILDSFESSKQVPAPPLSDVVAGM 59


>ref|NP_001148662.1| LOC100282278 [Zea mays] gi|242091243|ref|XP_002441454.1|
           hypothetical protein SORBIDRAFT_09g027070 [Sorghum
           bicolor] gi|195609012|gb|ACG26336.1| fiber protein Fb11
           [Zea mays] gi|195621188|gb|ACG32424.1| fiber protein
           Fb11 [Zea mays] gi|195658433|gb|ACG48684.1| fiber
           protein Fb11 [Zea mays] gi|241946739|gb|EES19884.1|
           hypothetical protein SORBIDRAFT_09g027070 [Sorghum
           bicolor] gi|413948287|gb|AFW80936.1| fiber protein Fb11
           [Zea mays]
          Length = 64

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/53 (66%), Positives = 43/53 (81%)
 Frame = -1

Query: 449 LRMFVAQEPVVAVSCLMAGVGLFLPAVVRPILDKYERADEAEAPPLKDVVASI 291
           L++FV +EPVVA SCL+AG GLFLPAVVRPILD +E A++   PPL DVVA +
Sbjct: 7   LKIFVVKEPVVAASCLIAGFGLFLPAVVRPILDSWETAEKVPPPPLNDVVAGV 59


>gb|AFK43416.1| unknown [Medicago truncatula]
          Length = 63

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/53 (67%), Positives = 41/53 (77%)
 Frame = -1

Query: 449 LRMFVAQEPVVAVSCLMAGVGLFLPAVVRPILDKYERADEAEAPPLKDVVASI 291
           LRMFVAQEPVVA SCL+AG GLFLPA VRP+LD Y  A++   P L DVVA +
Sbjct: 7   LRMFVAQEPVVAASCLIAGFGLFLPAFVRPMLDTYRAAEQPPQPALSDVVAGM 59