BLASTX nr result

ID: Coptis25_contig00004041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004041
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281756.2| PREDICTED: uncharacterized protein LOC100251...    57   7e-10
emb|CBI25319.3| unnamed protein product [Vitis vinifera]               57   7e-10
ref|XP_002277105.1| PREDICTED: uncharacterized protein LOC100258...    55   1e-09
emb|CAN60012.1| hypothetical protein VITISV_036556 [Vitis vinifera]    55   1e-09
gb|ABK25831.1| unknown [Picea sitchensis] gi|224284468|gb|ACN399...    50   5e-09

>ref|XP_002281756.2| PREDICTED: uncharacterized protein LOC100251921 [Vitis vinifera]
          Length = 304

 Score = 56.6 bits (135), Expect(2) = 7e-10
 Identities = 25/32 (78%), Positives = 29/32 (90%)
 Frame = +2

Query: 455 EFSDPHDANDARYSLNGWQFDGSRMVVEFAEG 550
           EFSDP DA+DARYSLNG  FDGSR++VEFA+G
Sbjct: 50  EFSDPRDADDARYSLNGRDFDGSRIIVEFAKG 81



 Score = 32.0 bits (71), Expect(2) = 7e-10
 Identities = 12/19 (63%), Positives = 17/19 (89%)
 Frame = +3

Query: 399 NRFRRVRDVDLKHGFAFIK 455
           +R+ RVRDVD+KH FAF++
Sbjct: 32  SRYGRVRDVDMKHDFAFVE 50


>emb|CBI25319.3| unnamed protein product [Vitis vinifera]
          Length = 278

 Score = 56.6 bits (135), Expect(2) = 7e-10
 Identities = 25/32 (78%), Positives = 29/32 (90%)
 Frame = +2

Query: 455 EFSDPHDANDARYSLNGWQFDGSRMVVEFAEG 550
           EFSDP DA+DARYSLNG  FDGSR++VEFA+G
Sbjct: 82  EFSDPRDADDARYSLNGRDFDGSRIIVEFAKG 113



 Score = 32.0 bits (71), Expect(2) = 7e-10
 Identities = 12/19 (63%), Positives = 17/19 (89%)
 Frame = +3

Query: 399 NRFRRVRDVDLKHGFAFIK 455
           +R+ RVRDVD+KH FAF++
Sbjct: 64  SRYGRVRDVDMKHDFAFVE 82


>ref|XP_002277105.1| PREDICTED: uncharacterized protein LOC100258584 [Vitis vinifera]
          Length = 307

 Score = 55.5 bits (132), Expect(2) = 1e-09
 Identities = 24/32 (75%), Positives = 29/32 (90%)
 Frame = +2

Query: 455 EFSDPHDANDARYSLNGWQFDGSRMVVEFAEG 550
           EFSDP DA+DARY+LNG  FDGSR++VEFA+G
Sbjct: 50  EFSDPRDADDARYNLNGRDFDGSRIIVEFAKG 81



 Score = 32.0 bits (71), Expect(2) = 1e-09
 Identities = 12/19 (63%), Positives = 17/19 (89%)
 Frame = +3

Query: 399 NRFRRVRDVDLKHGFAFIK 455
           +R+ RVRDVD+KH FAF++
Sbjct: 32  SRYGRVRDVDMKHDFAFVE 50


>emb|CAN60012.1| hypothetical protein VITISV_036556 [Vitis vinifera]
          Length = 306

 Score = 55.5 bits (132), Expect(2) = 1e-09
 Identities = 24/32 (75%), Positives = 29/32 (90%)
 Frame = +2

Query: 455 EFSDPHDANDARYSLNGWQFDGSRMVVEFAEG 550
           EFSDP DA+DARY+LNG  FDGSR++VEFA+G
Sbjct: 50  EFSDPRDADDARYNLNGRDFDGSRIIVEFAKG 81



 Score = 32.0 bits (71), Expect(2) = 1e-09
 Identities = 12/19 (63%), Positives = 17/19 (89%)
 Frame = +3

Query: 399 NRFRRVRDVDLKHGFAFIK 455
           +R+ RVRDVD+KH FAF++
Sbjct: 32  SRYGRVRDVDMKHDFAFVE 50


>gb|ABK25831.1| unknown [Picea sitchensis] gi|224284468|gb|ACN39968.1| unknown
           [Picea sitchensis]
          Length = 316

 Score = 50.4 bits (119), Expect(2) = 5e-09
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = +2

Query: 455 EFSDPHDANDARYSLNGWQFDGSRMVVEFAEG 550
           EFSDP DA++ARY LNG   DGSR+VVEFA G
Sbjct: 50  EFSDPRDADEARYYLNGRDLDGSRIVVEFARG 81



 Score = 35.0 bits (79), Expect(2) = 5e-09
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = +3

Query: 399 NRFRRVRDVDLKHGFAFIK 455
           NR+ RVRDVDLKH FAFI+
Sbjct: 32  NRYGRVRDVDLKHDFAFIE 50


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