BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004038
         (668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27999.3| unnamed protein product [Vitis vinifera]              197   1e-48
ref|XP_002312627.1| predicted protein [Populus trichocarpa] gi|2...   194   1e-47
gb|ACN26576.1| unknown [Zea mays] gi|414590821|tpg|DAA41392.1| T...   193   3e-47
ref|NP_001150396.1| mitochondrial import inner membrane transloc...   193   3e-47
tpg|DAA41391.1| TPA: putative mitochondrial import inner membran...   192   5e-47

>emb|CBI27999.3| unnamed protein product [Vitis vinifera]
          Length = 205

 Score =  197 bits (502), Expect = 1e-48
 Identities = 112/219 (51%), Positives = 126/219 (57%), Gaps = 10/219 (4%)
 Frame = -3

Query: 645 VGHTENGREPCPDRILDDLGGAFSMGCVGGSVFHFIKGAKNSPIGDRLSGGFQTARMSAP 466
           +G  E  REPCPDRILDD+GGAF MG VGGS FHF+KG  NSP G+R+ GG Q  RM+AP
Sbjct: 1   MGTPETSREPCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPKGERVIGGSQAVRMNAP 60

Query: 465 RTGGSFAVWGGLFSCFDCTMVYLRNKEDPWNSIVAGAATGGFLQMRQGLKASGKSXXXXX 286
           R GGSFAVWGGLFS FDCTMVY+R KEDPWNSI+AGAATGGFLQMRQGL AS +S     
Sbjct: 61  RVGGSFAVWGGLFSAFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGLAASTRSAIFGG 120

Query: 285 XXXXXXXXXXXXLNVLFSXXXXXXXXXXXXXXXXXQTMPMSKEVENEKPG--------WF 130
                       LN + S                   M M + V    PG        WF
Sbjct: 121 VLLGLIEGAGIMLNKVLS-------------APQNLPMTMEEPVPGMTPGPPSSGSSSWF 167

Query: 129 G--FGRXXXXXXXXXXXXXXEVFDSFDTPAATMPSFDYK 19
           G  FG               E+ +SFDTP   MPSF+YK
Sbjct: 168 GGLFGGGKKQEPAANSGSKTEILESFDTP-TPMPSFEYK 205


>ref|XP_002312627.1| predicted protein [Populus trichocarpa] gi|222852447|gb|EEE89994.1|
           predicted protein [Populus trichocarpa]
          Length = 214

 Score =  194 bits (494), Expect = 1e-47
 Identities = 108/216 (50%), Positives = 121/216 (56%), Gaps = 7/216 (3%)
 Frame = -3

Query: 645 VGHTENGREPCPDRILDDLGGAFSMGCVGGSVFHFIKGAKNSPIGDRLSGGFQTARMSAP 466
           +G  E  REPCPDRILDD+GGAF MG VGGS FHF+KG  NSP G RL GG Q  RM+AP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVHNSPSGARLMGGTQAVRMNAP 60

Query: 465 RTGGSFAVWGGLFSCFDCTMVYLRNKEDPWNSIVAGAATGGFLQMRQGLKASGKSXXXXX 286
           R GGSFAVWGGLFS FDC+MVYLR KEDPWNSI+AGAATGGFL MRQGL AS +S     
Sbjct: 61  RVGGSFAVWGGLFSAFDCSMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGASARSAVFGG 120

Query: 285 XXXXXXXXXXXXLNVLFS-----XXXXXXXXXXXXXXXXXQTMPMSKEVENEKPGWFG-- 127
                       LN +                           PM +  E E   WFG  
Sbjct: 121 VLLGLIEGAGIMLNKVMGDQQSMPIMIDEDPIPAMAGGGPGGFPMGQAQEGESGSWFGGW 180

Query: 126 FGRXXXXXXXXXXXXXXEVFDSFDTPAATMPSFDYK 19
           FG               EV +SFD P   +P+F+YK
Sbjct: 181 FGGEKKKKESTAASSKTEVLESFDAP--PVPTFEYK 214


>gb|ACN26576.1| unknown [Zea mays] gi|414590821|tpg|DAA41392.1| TPA: putative
           mitochondrial import inner membrane translocase subunit
           TIM17 family protein isoform 1 [Zea mays]
           gi|414590822|tpg|DAA41393.1| TPA: putative mitochondrial
           import inner membrane translocase subunit TIM17 family
           protein isoform 2 [Zea mays]
          Length = 222

 Score =  193 bits (490), Expect = 3e-47
 Identities = 108/222 (48%), Positives = 124/222 (55%), Gaps = 13/222 (5%)
 Frame = -3

Query: 645 VGHTENGREPCPDRILDDLGGAFSMGCVGGSVFHFIKGAKNSPIGDRLSGGFQTARMSAP 466
           +G  E  REPCPDRILDD+GGAF MG VGGS +HFIKG  NSP G RLSGG QT RM+AP
Sbjct: 1   MGTPETSREPCPDRILDDVGGAFGMGAVGGSAYHFIKGIYNSPNGMRLSGGAQTVRMNAP 60

Query: 465 RTGGSFAVWGGLFSCFDCTMVYLRNKEDPWNSIVAGAATGGFLQMRQGLKASGKSXXXXX 286
           R GGSFAVWGGLFS FDC MVY R KEDPWNSIVAGAATGGFL MRQG+ A+G+S     
Sbjct: 61  RVGGSFAVWGGLFSTFDCAMVYARQKEDPWNSIVAGAATGGFLSMRQGMGAAGRSALMGG 120

Query: 285 XXXXXXXXXXXXLNVLFS-----------XXXXXXXXXXXXXXXXXQTMPMSKEVENEKP 139
                       LN + +                               P      +   
Sbjct: 121 ILLALIEGAGLMLNRVLANPPLPADDPNLTAAMGGNPFPGLPQAPPVVAPPEATTSSGVG 180

Query: 138 GWFG--FGRXXXXXXXXXXXXXXEVFDSFDTPAATMPSFDYK 19
           G FG  FGR              E+ +SFDTP++ +PSF+YK
Sbjct: 181 GLFGGLFGRKEEEKKPSAGGGKSEILESFDTPSSPIPSFEYK 222


>ref|NP_001150396.1| mitochondrial import inner membrane translocase subunit Tim17 [Zea
           mays] gi|195638924|gb|ACG38930.1| mitochondrial import
           inner membrane translocase subunit Tim17 [Zea mays]
          Length = 222

 Score =  193 bits (490), Expect = 3e-47
 Identities = 108/222 (48%), Positives = 124/222 (55%), Gaps = 13/222 (5%)
 Frame = -3

Query: 645 VGHTENGREPCPDRILDDLGGAFSMGCVGGSVFHFIKGAKNSPIGDRLSGGFQTARMSAP 466
           +G  E  REPCPDRILDD+GGAF MG VGGS +HFIKG  NSP G RLSGG QT RM+AP
Sbjct: 1   MGTPETSREPCPDRILDDVGGAFGMGAVGGSAYHFIKGIYNSPNGMRLSGGAQTVRMNAP 60

Query: 465 RTGGSFAVWGGLFSCFDCTMVYLRNKEDPWNSIVAGAATGGFLQMRQGLKASGKSXXXXX 286
           R GGSFAVWGGLFS FDC MVY R KEDPWNSIVAGAATGGFL MRQG+ A+G+S     
Sbjct: 61  RVGGSFAVWGGLFSTFDCAMVYARQKEDPWNSIVAGAATGGFLSMRQGMGAAGRSALMGG 120

Query: 285 XXXXXXXXXXXXLNVLFS-----------XXXXXXXXXXXXXXXXXQTMPMSKEVENEKP 139
                       LN + +                               P      +   
Sbjct: 121 ILLALIEGAGLMLNRVLANPPLPADDPNLTAAMGGNPFPGLPQAPPVVAPPEAATSSGVG 180

Query: 138 GWFG--FGRXXXXXXXXXXXXXXEVFDSFDTPAATMPSFDYK 19
           G FG  FGR              E+ +SFDTP++ +PSF+YK
Sbjct: 181 GLFGGLFGRKEEDKKPSAVGGKSEILESFDTPSSPIPSFEYK 222


>tpg|DAA41391.1| TPA: putative mitochondrial import inner membrane translocase
           subunit TIM17 family protein [Zea mays]
          Length = 233

 Score =  192 bits (488), Expect = 5e-47
 Identities = 108/225 (48%), Positives = 125/225 (55%), Gaps = 13/225 (5%)
 Frame = -3

Query: 645 VGHTENGREPCPDRILDDLGGAFSMGCVGGSVFHFIKGAKNSPIGDRLSGGFQTARMSAP 466
           +G  E  REPCPDRILDD+GGAF MG VGGS +HFIKG  NSP G RLSGG QT RM+AP
Sbjct: 1   MGTPETSREPCPDRILDDVGGAFGMGAVGGSAYHFIKGIYNSPNGMRLSGGAQTVRMNAP 60

Query: 465 RTGGSFAVWGGLFSCFDCTMVYLRNKEDPWNSIVAGAATGGFLQMRQGLKASGKSXXXXX 286
           R GGSFAVWGGLFS FDC MVY R KEDPWNSIVAGAATGGFL MRQG+ A+G+S     
Sbjct: 61  RVGGSFAVWGGLFSTFDCAMVYARQKEDPWNSIVAGAATGGFLSMRQGMGAAGRSALMGG 120

Query: 285 XXXXXXXXXXXXLNVLFS-----------XXXXXXXXXXXXXXXXXQTMPMSKEVENEKP 139
                       LN + +                               P      +   
Sbjct: 121 ILLALIEGAGLMLNRVLANPPLPADDPNLTAAMGGNPFPGLPQAPPVVAPPEATTSSGVG 180

Query: 138 GWFG--FGRXXXXXXXXXXXXXXEVFDSFDTPAATMPSFDYK*DG 10
           G FG  FGR              E+ +SFDTP++ +PSF+Y  +G
Sbjct: 181 GLFGGLFGRKEEEKKPSAGGGKSEILESFDTPSSPIPSFEYNYNG 225