BLASTX nr result

ID: Coptis25_contig00004020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004020
         (1447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26303.3| unnamed protein product [Vitis vinifera]              326   8e-87
ref|XP_002283288.1| PREDICTED: uncharacterized protein LOC100256...   326   8e-87
ref|XP_002517076.1| ice binding protein, putative [Ricinus commu...   317   5e-84
ref|XP_003536516.1| PREDICTED: uncharacterized protein LOC100815...   315   1e-83
ref|XP_002315753.1| predicted protein [Populus trichocarpa] gi|2...   313   5e-83

>emb|CBI26303.3| unnamed protein product [Vitis vinifera]
          Length = 413

 Score =  326 bits (836), Expect = 8e-87
 Identities = 165/249 (66%), Positives = 184/249 (73%), Gaps = 4/249 (1%)
 Frame = +3

Query: 51  SSGSGKDEQMAKTDMXXXXXXXXXXXXXXEAAEALGAEREHLXXXXXXXXXXXXXGDIXX 230
           SSG+GKDEQMAKTDM              EAAEA+GAEREHL             GDI  
Sbjct: 164 SSGAGKDEQMAKTDMAVASAATLVAAQCVEAAEAMGAEREHLASVVGSAVNVRSAGDIMT 223

Query: 231 XXXXXXXXXXXXXXXXXXXXXEVWNIAAVIPVERGMA----GTNNGHSNGSYSGELVPEE 398
                                EVWNIAAVIPV++GM       +NG+SN SYSGELV EE
Sbjct: 224 LTAAAATALRGAATLKARALKEVWNIAAVIPVDKGMGIGGGNGSNGNSNSSYSGELVAEE 283

Query: 399 NFLGICSQELLARGCELLKRTRQGELHWKVVSVYINRLGQVMLKMKSRHVAGTITKKKKN 578
           NFLGICS+ELLARGCELLKRTR+G+LHWKVVSVYINR+GQVMLKMKSRHVAGTITKKKKN
Sbjct: 284 NFLGICSRELLARGCELLKRTRKGDLHWKVVSVYINRMGQVMLKMKSRHVAGTITKKKKN 343

Query: 579 IVLEVCKDMPAWPGRHLLDGGHHRRYFGLKTELRGLVEFECRDQREYDIWTQGVSRLLSI 758
           +VLEVCKDMPAWPGRHLL+GG HRRYFGLKT  RG++EFECR+QREYDIWT GVSRLL++
Sbjct: 344 VVLEVCKDMPAWPGRHLLEGGEHRRYFGLKTIQRGVIEFECRNQREYDIWTHGVSRLLTV 403

Query: 759 AADKKNRHR 785
           A ++ NRHR
Sbjct: 404 AGERNNRHR 412


>ref|XP_002283288.1| PREDICTED: uncharacterized protein LOC100256307 [Vitis vinifera]
          Length = 461

 Score =  326 bits (836), Expect = 8e-87
 Identities = 165/249 (66%), Positives = 184/249 (73%), Gaps = 4/249 (1%)
 Frame = +3

Query: 51  SSGSGKDEQMAKTDMXXXXXXXXXXXXXXEAAEALGAEREHLXXXXXXXXXXXXXGDIXX 230
           SSG+GKDEQMAKTDM              EAAEA+GAEREHL             GDI  
Sbjct: 212 SSGAGKDEQMAKTDMAVASAATLVAAQCVEAAEAMGAEREHLASVVGSAVNVRSAGDIMT 271

Query: 231 XXXXXXXXXXXXXXXXXXXXXEVWNIAAVIPVERGMA----GTNNGHSNGSYSGELVPEE 398
                                EVWNIAAVIPV++GM       +NG+SN SYSGELV EE
Sbjct: 272 LTAAAATALRGAATLKARALKEVWNIAAVIPVDKGMGIGGGNGSNGNSNSSYSGELVAEE 331

Query: 399 NFLGICSQELLARGCELLKRTRQGELHWKVVSVYINRLGQVMLKMKSRHVAGTITKKKKN 578
           NFLGICS+ELLARGCELLKRTR+G+LHWKVVSVYINR+GQVMLKMKSRHVAGTITKKKKN
Sbjct: 332 NFLGICSRELLARGCELLKRTRKGDLHWKVVSVYINRMGQVMLKMKSRHVAGTITKKKKN 391

Query: 579 IVLEVCKDMPAWPGRHLLDGGHHRRYFGLKTELRGLVEFECRDQREYDIWTQGVSRLLSI 758
           +VLEVCKDMPAWPGRHLL+GG HRRYFGLKT  RG++EFECR+QREYDIWT GVSRLL++
Sbjct: 392 VVLEVCKDMPAWPGRHLLEGGEHRRYFGLKTIQRGVIEFECRNQREYDIWTHGVSRLLTV 451

Query: 759 AADKKNRHR 785
           A ++ NRHR
Sbjct: 452 AGERNNRHR 460


>ref|XP_002517076.1| ice binding protein, putative [Ricinus communis]
           gi|223543711|gb|EEF45239.1| ice binding protein,
           putative [Ricinus communis]
          Length = 477

 Score =  317 bits (812), Expect = 5e-84
 Identities = 162/249 (65%), Positives = 185/249 (74%), Gaps = 4/249 (1%)
 Frame = +3

Query: 51  SSGSGKDEQMAKTDMXXXXXXXXXXXXXXEAAEALGAEREHLXXXXXXXXXXXXXGDIXX 230
           SSG+GKDEQMAKTDM              EAAEA+GAEREHL             GDI  
Sbjct: 228 SSGNGKDEQMAKTDMAVASAATLVAAQCVEAAEAMGAEREHLASVVSSAVNVRSPGDIMT 287

Query: 231 XXXXXXXXXXXXXXXXXXXXXEVWNIAAVIPVERGM--AGTN--NGHSNGSYSGELVPEE 398
                                EVWNIAAVIPV++G+  +G N  NG SNGS+SGELVPEE
Sbjct: 288 LTAAAATALRGAATLKARALKEVWNIAAVIPVDKGLGVSGGNGSNGSSNGSFSGELVPEE 347

Query: 399 NFLGICSQELLARGCELLKRTRQGELHWKVVSVYINRLGQVMLKMKSRHVAGTITKKKKN 578
           NFLGICS+ELLARGCELLKRTR+G+LHWK+VSVY+NR+ QVMLKMKSRHVAGTITKKKKN
Sbjct: 348 NFLGICSRELLARGCELLKRTRKGDLHWKIVSVYVNRMNQVMLKMKSRHVAGTITKKKKN 407

Query: 579 IVLEVCKDMPAWPGRHLLDGGHHRRYFGLKTELRGLVEFECRDQREYDIWTQGVSRLLSI 758
           +VLEV K +PAWPGRHLL+GG HRRYFGLKT LRG+VEFEC +QR+YD+WTQGVSRLL+I
Sbjct: 408 VVLEVIKHIPAWPGRHLLEGGEHRRYFGLKTVLRGVVEFECLNQRDYDLWTQGVSRLLAI 467

Query: 759 AADKKNRHR 785
           A +K +RHR
Sbjct: 468 AEEKSHRHR 476


>ref|XP_003536516.1| PREDICTED: uncharacterized protein LOC100815538 [Glycine max]
          Length = 476

 Score =  315 bits (808), Expect = 1e-83
 Identities = 162/254 (63%), Positives = 184/254 (72%), Gaps = 9/254 (3%)
 Frame = +3

Query: 51  SSGSGKDEQMAKTDMXXXXXXXXXXXXXXEAAEALGAEREHLXXXXXXXXXXXXXGDIXX 230
           +SG+GKDEQMAKTDM              EAAEALGAEREHL             GDI  
Sbjct: 222 TSGAGKDEQMAKTDMAVASAATLVAAQCVEAAEALGAEREHLASVVSSSVNVRSAGDIMT 281

Query: 231 XXXXXXXXXXXXXXXXXXXXXEVWNIAAVIPVERGMA---------GTNNGHSNGSYSGE 383
                                EVWNIAAVIPVE+ +A           +NG+S  S+SGE
Sbjct: 282 LTAAAATALRGAATLKARALKEVWNIAAVIPVEKNLAVAGGHNNNNNASNGNSKSSFSGE 341

Query: 384 LVPEENFLGICSQELLARGCELLKRTRQGELHWKVVSVYINRLGQVMLKMKSRHVAGTIT 563
           LVPEENFLGICS+ELLARGCELLKRTR+G+LHWKVVSVY+NR+ QV+LKMKSRHVAGTIT
Sbjct: 342 LVPEENFLGICSRELLARGCELLKRTRKGDLHWKVVSVYVNRMNQVILKMKSRHVAGTIT 401

Query: 564 KKKKNIVLEVCKDMPAWPGRHLLDGGHHRRYFGLKTELRGLVEFECRDQREYDIWTQGVS 743
           KKKKN+VLEV KD+PAWPGRHLL+GG  RRYFGLKT +RGLVEFECR+QREYD+WTQGVS
Sbjct: 402 KKKKNVVLEVIKDVPAWPGRHLLEGGEDRRYFGLKTVMRGLVEFECRNQREYDVWTQGVS 461

Query: 744 RLLSIAADKKNRHR 785
           RLLSIAA+K N++R
Sbjct: 462 RLLSIAAEKNNKNR 475


>ref|XP_002315753.1| predicted protein [Populus trichocarpa] gi|222864793|gb|EEF01924.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score =  313 bits (803), Expect = 5e-83
 Identities = 163/257 (63%), Positives = 184/257 (71%), Gaps = 12/257 (4%)
 Frame = +3

Query: 51  SSGSGKDEQMAKTDMXXXXXXXXXXXXXXEAAEALGAEREHLXXXXXXXXXXXXXGDIXX 230
           SSG+GKDEQMAKTDM              EAAEA+GAEREHL             GDI  
Sbjct: 228 SSGAGKDEQMAKTDMAVASAATLVAAQCVEAAEAMGAEREHLASVVNSAVNVRSAGDIMT 287

Query: 231 XXXXXXXXXXXXXXXXXXXXX--------EVWNIAAVIPVERGMA----GTNNGHSNGSY 374
                                        EVWNIAAVIPV++G+A      +NG SNGS+
Sbjct: 288 LTAAAATGMFVFLYFSLRGAATLKARALKEVWNIAAVIPVDKGLAVAGGNGSNGSSNGSF 347

Query: 375 SGELVPEENFLGICSQELLARGCELLKRTRQGELHWKVVSVYINRLGQVMLKMKSRHVAG 554
           SGELVPEENFLGICS+ELLARGCELLKRTR+G+LHWK+VSVY+NR+ QVMLKMKS+HVAG
Sbjct: 348 SGELVPEENFLGICSRELLARGCELLKRTRKGDLHWKIVSVYVNRMNQVMLKMKSKHVAG 407

Query: 555 TITKKKKNIVLEVCKDMPAWPGRHLLDGGHHRRYFGLKTELRGLVEFECRDQREYDIWTQ 734
           TITKKKKN+VL V KDMPAWPGRHLL+GG HRRYFGLKT  RG+VEFEC +Q+EYD+WTQ
Sbjct: 408 TITKKKKNVVLAVIKDMPAWPGRHLLEGGEHRRYFGLKTLQRGVVEFECMNQKEYDLWTQ 467

Query: 735 GVSRLLSIAADKKNRHR 785
           GVSRLLSIAA+K NRHR
Sbjct: 468 GVSRLLSIAAEKGNRHR 484


Top